RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 DDTLA6NHG4 134 aaPredicted RBP11.25□□□□□ -0.61
COPS4-204ENST00000506443 POTEB2H3BUK9 544 aa11.25□□□□□ -0.61
COPS4-204ENST00000506443 FGFR2P21802 821 aa11.25□□□□□ -0.61
COPS4-204ENST00000506443 RGS3P49796 1198 aa11.25□□□□□ -0.61
COPS4-204ENST00000506443 IRF5Q13568 498 aa11.25□□□□□ -0.61
COPS4-204ENST00000506443 RRP1BQ14684 758 aaKnown RBP11.25□□□□□ -0.61
COPS4-204ENST00000506443 LRRC26Q2I0M4 334 aa11.25□□□□□ -0.61
COPS4-204ENST00000506443 SHROOM1Q2M3G4 852 aaPredicted RBP11.25□□□□□ -0.61
COPS4-204ENST00000506443 PXYLP1Q8TE99 480 aa11.25□□□□□ -0.61
COPS4-204ENST00000506443 SMCR8Q8TEV9 937 aaPredicted RBP11.25□□□□□ -0.61
COPS4-204ENST00000506443 HOOK2Q96ED9 719 aa11.25□□□□□ -0.61
COPS4-204ENST00000506443 AFG3L2Q9Y4W6 797 aa11.25□□□□□ -0.61
COPS4-204ENST00000506443 DNAH12Q6ZR08 3092 aa11.24□□□□□ -0.61
COPS4-204ENST00000506443 CAVIN4Q5BKX8 364 aa11.24□□□□□ -0.61
COPS4-204ENST00000506443 MS4A3Q96HJ5 214 aa11.24□□□□□ -0.61
COPS4-204ENST00000506443 C11orf49Q9H6J7 331 aa11.24□□□□□ -0.61
COPS4-204ENST00000506443 KIF16BQ96L93 1317 aa11.24□□□□□ -0.61
COPS4-204ENST00000506443 CXCL11O14625 94 aa11.23□□□□□ -0.61
COPS4-204ENST00000506443 HMGCRP04035 888 aa11.23□□□□□ -0.61
COPS4-204ENST00000506443 USP40Q9NVE5 1235 aa11.23□□□□□ -0.61
COPS4-204ENST00000506443 GJD2Q9UKL4 321 aa11.23□□□□□ -0.61
COPS4-204ENST00000506443 MAST3O60307 1309 aa11.22□□□□□ -0.61
COPS4-204ENST00000506443 CYP2B6P20813 491 aa11.22□□□□□ -0.61
COPS4-204ENST00000506443 MUC3AQ02505 3323 aa11.22□□□□□ -0.61
COPS4-204ENST00000506443 PICALMQ13492 652 aa11.22□□□□□ -0.61
COPS4-204ENST00000506443 CCL14Q16627 93 aa11.22□□□□□ -0.61
COPS4-204ENST00000506443 GPR153Q6NV75 609 aa11.22□□□□□ -0.61
COPS4-204ENST00000506443 NBPF3Q9H094 633 aa11.22□□□□□ -0.61
COPS4-204ENST00000506443 AGTPBP1Q9UPW5 1226 aa11.22□□□□□ -0.61
COPS4-204ENST00000506443 CDK5RAP2Q96SN8 1893 aa11.21□□□□□ -0.61
COPS4-204ENST00000506443 COL6A1P12109 1028 aa11.21□□□□□ -0.61
COPS4-204ENST00000506443 CCND3P30281 292 aaPredicted RBP11.21□□□□□ -0.61
COPS4-204ENST00000506443 ADORA1P30542 326 aa11.21□□□□□ -0.61
COPS4-204ENST00000506443 PHKA1P46020 1223 aa11.21□□□□□ -0.61
COPS4-204ENST00000506443 RFX5P48382 616 aaPredicted RBP11.21□□□□□ -0.61
COPS4-204ENST00000506443 HMGCS2P54868 508 aa11.21□□□□□ -0.61
COPS4-204ENST00000506443 JAG1P78504 1218 aa11.21□□□□□ -0.61
COPS4-204ENST00000506443 MAP3K10Q02779 954 aa11.21□□□□□ -0.61
COPS4-204ENST00000506443 FAM110CQ1W6H9 321 aa11.21□□□□□ -0.61
COPS4-204ENST00000506443 POTEEQ6S8J3 1075 aa11.21□□□□□ -0.61
COPS4-204ENST00000506443 MIER1Q8N108 512 aa11.21□□□□□ -0.61
COPS4-204ENST00000506443 WDR66Q8TBY9 1149 aa11.21□□□□□ -0.61
COPS4-204ENST00000506443 USP44Q9H0E7 712 aa11.21□□□□□ -0.61
COPS4-204ENST00000506443 TXNRD2Q9NNW7 524 aa11.21□□□□□ -0.61
COPS4-204ENST00000506443 PICK1Q9NRD5 415 aa11.21□□□□□ -0.61
COPS4-204ENST00000506443 OGDHLQ9ULD0 1010 aa11.21□□□□□ -0.61
COPS4-204ENST00000506443 PUM3Q15397 648 aaKnown RBP11.2□□□□□ -0.62
COPS4-204ENST00000506443 MAP3K21Q5TCX8 1036 aa11.2□□□□□ -0.62
COPS4-204ENST00000506443 ATG9AQ7Z3C6 839 aa11.2□□□□□ -0.62
COPS4-204ENST00000506443 ZNF384Q8TF68 577 aa11.2□□□□□ -0.62
COPS4-204ENST00000506443 COA7Q96BR5 231 aa11.2□□□□□ -0.62
COPS4-204ENST00000506443 RLFQ13129 1914 aa11.19□□□□□ -0.62
COPS4-204ENST00000506443 EYA2O00167 538 aa11.19□□□□□ -0.62
COPS4-204ENST00000506443 IFIT1P09914 478 aaKnown RBP11.19□□□□□ -0.62
COPS4-204ENST00000506443 C9orf50Q5SZB4 431 aa11.19□□□□□ -0.62
COPS4-204ENST00000506443 ASTLQ6HA08 431 aaPredicted RBP11.19□□□□□ -0.62
COPS4-204ENST00000506443 FASTKD5Q7L8L6 764 aaKnown RBP11.19□□□□□ -0.62
COPS4-204ENST00000506443 ZSCAN29Q8IWY8 852 aaPredicted RBP11.19□□□□□ -0.62
COPS4-204ENST00000506443 MRPL50Q8N5N7 158 aaKnown RBP11.19□□□□□ -0.62
COPS4-204ENST00000506443 ANKLE1Q8NAG6 615 aa11.19□□□□□ -0.62
COPS4-204ENST00000506443 USP38Q8NB14 1042 aa11.19□□□□□ -0.62
COPS4-204ENST00000506443 MYLIPQ8WY64 445 aa11.19□□□□□ -0.62
COPS4-204ENST00000506443 LPIN2Q92539 896 aa11.19□□□□□ -0.62
COPS4-204ENST00000506443 CDX2Q99626 313 aaPredicted RBP11.19□□□□□ -0.62
COPS4-204ENST00000506443 SIL1Q9H173 461 aa11.19□□□□□ -0.62
COPS4-204ENST00000506443 ASCC2Q9H1I8 757 aaPredicted RBP11.19□□□□□ -0.62
COPS4-204ENST00000506443 TTYH1Q9H313 450 aaPredicted RBP11.19□□□□□ -0.62
COPS4-204ENST00000506443 HMX1Q9NP08 348 aaPredicted RBP11.19□□□□□ -0.62
COPS4-204ENST00000506443 GAKO14976 1311 aa11.18□□□□□ -0.62
COPS4-204ENST00000506443 CACNB2Q08289 660 aaPredicted RBP11.18□□□□□ -0.62
COPS4-204ENST00000506443 SPP2Q13103 211 aa11.18□□□□□ -0.62
COPS4-204ENST00000506443 PI16Q6UXB8 463 aa11.18□□□□□ -0.62
COPS4-204ENST00000506443 MAFAQ8NHW3 353 aaPredicted RBP11.18□□□□□ -0.62
COPS4-204ENST00000506443 IDI2Q9BXS1 227 aa11.18□□□□□ -0.62
COPS4-204ENST00000506443 PORCNQ9H237 461 aa11.18□□□□□ -0.62
COPS4-204ENST00000506443 PRDM6Q9NQX0 595 aa11.18□□□□□ -0.62
COPS4-204ENST00000506443 SLC45A1Q9Y2W3 748 aa11.18□□□□□ -0.62
COPS4-204ENST00000506443 LRRFIP2Q9Y608 721 aaKnown RBP11.18□□□□□ -0.62
COPS4-204ENST00000506443 NDUFB9Q9Y6M9 179 aa11.18□□□□□ -0.62
COPS4-204ENST00000506443 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.18□□□□□ -0.62
COPS4-204ENST00000506443 MYO5AQ9Y4I1 1855 aaKnown RBP11.17□□□□□ -0.62
COPS4-204ENST00000506443 SALL1Q9NSC2 1324 aa11.17□□□□□ -0.62
COPS4-204ENST00000506443 ATMINO43313 823 aaPredicted RBP11.17□□□□□ -0.62
COPS4-204ENST00000506443 LDHBP07195 334 aaKnown RBP11.17□□□□□ -0.62
COPS4-204ENST00000506443 SLC5A1P13866 664 aa11.17□□□□□ -0.62
COPS4-204ENST00000506443 CAPN2P17655 700 aa11.17□□□□□ -0.62
COPS4-204ENST00000506443 ZEB1P37275 1124 aaPredicted RBP11.17□□□□□ -0.62
COPS4-204ENST00000506443 BTDP43251 543 aa11.17□□□□□ -0.62
COPS4-204ENST00000506443 ATN1P54259 1190 aaPredicted RBP11.17□□□□□ -0.62
COPS4-204ENST00000506443 MRS2Q9HD23 443 aa11.17□□□□□ -0.62
COPS4-204ENST00000506443 FLRT1Q9NZU1 646 aa11.17□□□□□ -0.62
COPS4-204ENST00000506443 ENTPD3O75355 529 aa11.16□□□□□ -0.62
COPS4-204ENST00000506443 RHBDL3P58872 404 aa11.16□□□□□ -0.62
COPS4-204ENST00000506443 MTMR2Q13614 643 aa11.16□□□□□ -0.62
COPS4-204ENST00000506443 RASGRF1Q13972 1273 aa11.16□□□□□ -0.62
COPS4-204ENST00000506443 PA2G4Q9UQ80 394 aaKnown RBP11.16□□□□□ -0.62
COPS4-204ENST00000506443 ZNF521Q96K83 1311 aa11.15□□□□□ -0.62
COPS4-204ENST00000506443 FOCADQ5VW36 1801 aa11.15□□□□□ -0.62
COPS4-204ENST00000506443 CTNND1O60716 968 aaKnown RBP11.15□□□□□ -0.62
COPS4-204ENST00000506443 SHHQ15465 462 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms