RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 PALD1Q9ULE6 856 aa18.83■□□□□ 0.6
MED28-204ENST00000506409 KCNH4Q9UQ05 1017 aa18.83■□□□□ 0.6
MED28-204ENST00000506409 FKTNO75072 461 aa18.82■□□□□ 0.6
MED28-204ENST00000506409 PTPRAP18433 802 aa18.82■□□□□ 0.6
MED28-204ENST00000506409 FAM43AQ8N2R8 423 aa18.82■□□□□ 0.6
MED28-204ENST00000506409 ABHD8Q96I13 439 aa18.82■□□□□ 0.6
MED28-204ENST00000506409 ZHX2Q9Y6X8 837 aa18.82■□□□□ 0.6
MED28-204ENST00000506409 TCRBV5S4A2TA0A5A2 114 aa18.81■□□□□ 0.6
MED28-204ENST00000506409 BTBD19C9JJ37 291 aa18.81■□□□□ 0.6
MED28-204ENST00000506409 HLA-DOAP06340 250 aa18.81■□□□□ 0.6
MED28-204ENST00000506409 HDAC1Q13547 482 aaPredicted RBP18.81■□□□□ 0.6
MED28-204ENST00000506409 TAF1CQ15572 869 aaPredicted RBP18.81■□□□□ 0.6
MED28-204ENST00000506409 CTU1Q7Z7A3 348 aaKnown RBP18.81■□□□□ 0.6
MED28-204ENST00000506409 CRACR2BQ8N4Y2 399 aaPredicted RBP18.81■□□□□ 0.6
MED28-204ENST00000506409 TRIM34Q9BYJ4 488 aa18.81■□□□□ 0.6
MED28-204ENST00000506409 DOCK1Q14185 1865 aa18.81■□□□□ 0.6
MED28-204ENST00000506409 CXCL11O14625 94 aa18.8■□□□□ 0.6
MED28-204ENST00000506409 ADD2P35612 726 aa18.8■□□□□ 0.6
MED28-204ENST00000506409 SLC4A8Q2Y0W8 1093 aa18.8■□□□□ 0.6
MED28-204ENST00000506409 TSHZ3Q63HK5 1081 aa18.8■□□□□ 0.6
MED28-204ENST00000506409 FOXP4Q8IVH2 680 aaPredicted RBP18.8■□□□□ 0.6
MED28-204ENST00000506409 CRNKL1Q9BZJ0 848 aaKnown RBP18.8■□□□□ 0.6
MED28-204ENST00000506409 ZFYVE28Q9HCC9 887 aa18.8■□□□□ 0.6
MED28-204ENST00000506409 ZCCHC17Q9NP64 241 aaKnown RBP18.8■□□□□ 0.6
MED28-204ENST00000506409 ZBTB47Q9UFB7 747 aaPredicted RBP18.8■□□□□ 0.6
MED28-204ENST00000506409 SUPT16HQ9Y5B9 1047 aaKnown RBP18.8■□□□□ 0.6
MED28-204ENST00000506409 SIPA1L1O43166 1804 aa18.79■□□□□ 0.6
MED28-204ENST00000506409 CAP2P40123 477 aa18.79■□□□□ 0.6
MED28-204ENST00000506409 GCC1Q96CN9 775 aa18.79■□□□□ 0.6
MED28-204ENST00000506409 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.79■□□□□ 0.6
MED28-204ENST00000506409 AFG3L2Q9Y4W6 797 aa18.79■□□□□ 0.6
MED28-204ENST00000506409 RRP1BQ14684 758 aaKnown RBP18.78■□□□□ 0.6
MED28-204ENST00000506409 SLFNL1Q499Z3 407 aa18.78■□□□□ 0.6
MED28-204ENST00000506409 ZSCAN25Q6NSZ9 544 aa18.78■□□□□ 0.6
MED28-204ENST00000506409 ANKRD23Q86SG2 305 aa18.78■□□□□ 0.6
MED28-204ENST00000506409 CCDC84Q86UT8 332 aaPredicted RBP18.78■□□□□ 0.6
MED28-204ENST00000506409 METTL16Q86W50 562 aaKnown RBP18.78■□□□□ 0.6
MED28-204ENST00000506409 LCORLQ8N3X6 602 aa18.78■□□□□ 0.6
MED28-204ENST00000506409 DNAJC18Q9H819 358 aa18.78■□□□□ 0.6
MED28-204ENST00000506409 TTC41PQ6P2S7 1318 aa18.77■□□□□ 0.6
MED28-204ENST00000506409 MYH1P12882 1939 aa18.77■□□□□ 0.6
MED28-204ENST00000506409 TRIM75PA6NK02 468 aa18.77■□□□□ 0.6
MED28-204ENST00000506409 MOGSQ13724 837 aa18.77■□□□□ 0.6
MED28-204ENST00000506409 UBE3CQ15386 1083 aa18.77■□□□□ 0.6
MED28-204ENST00000506409 ANKRD45Q5TZF3 282 aa18.77■□□□□ 0.6
MED28-204ENST00000506409 TTC6Q86TZ1 520 aa18.77■□□□□ 0.6
MED28-204ENST00000506409 EXOC6Q8TAG9 804 aa18.77■□□□□ 0.6
MED28-204ENST00000506409 OTUD7AQ8TE49 926 aaPredicted RBP18.77■□□□□ 0.6
MED28-204ENST00000506409 ARMT1Q9H993 441 aa18.77■□□□□ 0.6
MED28-204ENST00000506409 A0A0G2JLL6 359 aaPredicted RBP18.76■□□□□ 0.59
MED28-204ENST00000506409 PDHXO00330 501 aa18.76■□□□□ 0.59
MED28-204ENST00000506409 ERC2O15083 957 aa18.76■□□□□ 0.59
MED28-204ENST00000506409 MBD4O95243 580 aa18.76■□□□□ 0.59
MED28-204ENST00000506409 CHGBP05060 677 aa18.76■□□□□ 0.59
MED28-204ENST00000506409 SP3Q02447 781 aa18.76■□□□□ 0.59
MED28-204ENST00000506409 FASTKD5Q7L8L6 764 aaKnown RBP18.76■□□□□ 0.59
MED28-204ENST00000506409 PRRT2Q7Z6L0 340 aaPredicted RBP18.76■□□□□ 0.59
MED28-204ENST00000506409 KBTBD3Q8NAB2 608 aa18.76■□□□□ 0.59
MED28-204ENST00000506409 SDR42E1Q8WUS8 393 aa18.76■□□□□ 0.59
MED28-204ENST00000506409 ERO1AQ96HE7 468 aa18.76■□□□□ 0.59
MED28-204ENST00000506409 SERPINB13Q9UIV8 391 aa18.76■□□□□ 0.59
MED28-204ENST00000506409 MYH7P12883 1935 aa18.76■□□□□ 0.59
MED28-204ENST00000506409 ATAD5Q96QE3 1844 aa18.75■□□□□ 0.59
MED28-204ENST00000506409 TLR2O60603 784 aa18.75■□□□□ 0.59
MED28-204ENST00000506409 POLR3DP05423 398 aaPredicted RBP18.75■□□□□ 0.59
MED28-204ENST00000506409 ASNSP08243 561 aa18.75■□□□□ 0.59
MED28-204ENST00000506409 MX1P20591 662 aa18.75■□□□□ 0.59
MED28-204ENST00000506409 PKN2Q16513 984 aaKnown RBP18.75■□□□□ 0.59
MED28-204ENST00000506409 TBC1D2Q9BYX2 928 aa18.75■□□□□ 0.59
MED28-204ENST00000506409 EHD4Q9H223 541 aa18.75■□□□□ 0.59
MED28-204ENST00000506409 MCM9Q9NXL9 1143 aa18.75■□□□□ 0.59
MED28-204ENST00000506409 DDX60LQ5H9U9 1706 aaKnown RBP18.74■□□□□ 0.59
MED28-204ENST00000506409 PHIPQ8WWQ0 1821 aa18.74■□□□□ 0.59
MED28-204ENST00000506409 NAV1Q8NEY1 1877 aa18.74■□□□□ 0.59
MED28-204ENST00000506409 USP17L5A8MUK1 530 aa18.74■□□□□ 0.59
MED28-204ENST00000506409 GLRX3O76003 335 aaKnown RBP18.74■□□□□ 0.59
MED28-204ENST00000506409 GDF11O95390 407 aa18.74■□□□□ 0.59
MED28-204ENST00000506409 SPP2Q13103 211 aa18.74■□□□□ 0.59
MED28-204ENST00000506409 GPAT2Q6NUI2 795 aa18.74■□□□□ 0.59
MED28-204ENST00000506409 GADL1Q6ZQY3 521 aa18.74■□□□□ 0.59
MED28-204ENST00000506409 ZNF280CQ8ND82 737 aa18.74■□□□□ 0.59
MED28-204ENST00000506409 PI4K2BQ8TCG2 481 aa18.74■□□□□ 0.59
MED28-204ENST00000506409 CD99L2Q8TCZ2 262 aa18.74■□□□□ 0.59
MED28-204ENST00000506409 RWDD1Q9H446 243 aaPredicted RBP18.74■□□□□ 0.59
MED28-204ENST00000506409 DCP1AQ9NPI6 582 aaPredicted RBP18.74■□□□□ 0.59
MED28-204ENST00000506409 CCDC85CA6NKD9 419 aa18.73■□□□□ 0.59
MED28-204ENST00000506409 PLCD1P51178 756 aa18.73■□□□□ 0.59
MED28-204ENST00000506409 PARK7Q99497 189 aaKnown RBP18.73■□□□□ 0.59
MED28-204ENST00000506409 PUS7LQ9H0K6 701 aaKnown RBP18.73■□□□□ 0.59
MED28-204ENST00000506409 AS3MTQ9HBK9 375 aa18.73■□□□□ 0.59
MED28-204ENST00000506409 GINM1Q9NU53 330 aa18.73■□□□□ 0.59
MED28-204ENST00000506409 PTPRFP10586 1907 aa18.72■□□□□ 0.59
MED28-204ENST00000506409 PRKAB2O43741 272 aa18.72■□□□□ 0.59
MED28-204ENST00000506409 JAG1P78504 1218 aa18.72■□□□□ 0.59
MED28-204ENST00000506409 ZBTB21Q9ULJ3 1066 aa18.72■□□□□ 0.59
MED28-204ENST00000506409 TRIM17Q9Y577 477 aa18.72■□□□□ 0.59
MED28-204ENST00000506409 SALL3Q9BXA9 1300 aa18.72■□□□□ 0.59
MED28-204ENST00000506409 SHROOM1Q2M3G4 852 aaPredicted RBP18.71■□□□□ 0.59
MED28-204ENST00000506409 LRRFIP1Q32MZ4 808 aaKnown RBP18.71■□□□□ 0.59
MED28-204ENST00000506409 TATDN1Q6P1N9 297 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms