RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 CEP85Q6P2H3 762 aa14.75□□□□□ -0.05
PDLIM7-214ENST00000505746 ERC1Q8IUD2 1116 aa14.75□□□□□ -0.05
PDLIM7-214ENST00000505746 SMCR8Q8TEV9 937 aaPredicted RBP14.75□□□□□ -0.05
PDLIM7-214ENST00000505746 CCDC8Q9H0W5 538 aaPredicted RBP14.75□□□□□ -0.05
PDLIM7-214ENST00000505746 DBNLQ9UJU6 430 aaKnown RBP14.75□□□□□ -0.05
PDLIM7-214ENST00000505746 AGTPBP1Q9UPW5 1226 aa14.75□□□□□ -0.05
PDLIM7-214ENST00000505746 HTTP42858 3142 aa14.75□□□□□ -0.05
PDLIM7-214ENST00000505746 MYH2Q9UKX2 1941 aa14.74□□□□□ -0.05
PDLIM7-214ENST00000505746 MYPNQ86TC9 1320 aa14.74□□□□□ -0.05
PDLIM7-214ENST00000505746 USP17L5A8MUK1 530 aa14.74□□□□□ -0.05
PDLIM7-214ENST00000505746 GRK4P32298 578 aa14.74□□□□□ -0.05
PDLIM7-214ENST00000505746 SPP2Q13103 211 aa14.74□□□□□ -0.05
PDLIM7-214ENST00000505746 HSP90AB4PQ58FF6 505 aa14.74□□□□□ -0.05
PDLIM7-214ENST00000505746 FOXP4Q8IVH2 680 aaPredicted RBP14.74□□□□□ -0.05
PDLIM7-214ENST00000505746 PROCA1Q8NCQ7 364 aaPredicted RBP14.74□□□□□ -0.05
PDLIM7-214ENST00000505746 ZNF280CQ8ND82 737 aa14.74□□□□□ -0.05
PDLIM7-214ENST00000505746 TGFBRAP1Q8WUH2 860 aa14.74□□□□□ -0.05
PDLIM7-214ENST00000505746 EAF2Q96CJ1 260 aaPredicted RBP14.74□□□□□ -0.05
PDLIM7-214ENST00000505746 AS3MTQ9HBK9 375 aa14.74□□□□□ -0.05
PDLIM7-214ENST00000505746 PNMA3Q9UL41 463 aa14.74□□□□□ -0.05
PDLIM7-214ENST00000505746 PABPC4Q13310 644 aaKnown RBP eCLIP14.73□□□□□ -0.05
PDLIM7-214ENST00000505746 CCDC84Q86UT8 332 aaPredicted RBP14.73□□□□□ -0.05
PDLIM7-214ENST00000505746 CERS3Q8IU89 383 aa14.73□□□□□ -0.05
PDLIM7-214ENST00000505746 MAPKAPK5Q8IW41 473 aa14.73□□□□□ -0.05
PDLIM7-214ENST00000505746 PANK1Q8TE04 598 aa14.73□□□□□ -0.05
PDLIM7-214ENST00000505746 GCC1Q96CN9 775 aa14.73□□□□□ -0.05
PDLIM7-214ENST00000505746 TRIM34Q9BYJ4 488 aa14.73□□□□□ -0.05
PDLIM7-214ENST00000505746 PIH1D3Q9NQM4 214 aaKnown RBP14.73□□□□□ -0.05
PDLIM7-214ENST00000505746 TLR7Q9NYK1 1049 aaKnown RBP14.73□□□□□ -0.05
PDLIM7-214ENST00000505746 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.73□□□□□ -0.05
PDLIM7-214ENST00000505746 AK9Q5TCS8 1911 aa14.72□□□□□ -0.05
PDLIM7-214ENST00000505746 FLT1P17948 1338 aa14.72□□□□□ -0.05
PDLIM7-214ENST00000505746 DOCK2Q92608 1830 aa14.72□□□□□ -0.05
PDLIM7-214ENST00000505746 CYP7A1P22680 504 aa14.72□□□□□ -0.05
PDLIM7-214ENST00000505746 UBXN2AP68543 259 aa14.72□□□□□ -0.05
PDLIM7-214ENST00000505746 PRKCZQ05513 592 aa14.72□□□□□ -0.05
PDLIM7-214ENST00000505746 TMED8Q6PL24 325 aaPredicted RBP14.72□□□□□ -0.05
PDLIM7-214ENST00000505746 ADGRA1Q86SQ6 560 aa14.72□□□□□ -0.05
PDLIM7-214ENST00000505746 CRACR2BQ8N4Y2 399 aaPredicted RBP14.72□□□□□ -0.05
PDLIM7-214ENST00000505746 NKX2-3Q8TAU0 364 aa14.72□□□□□ -0.05
PDLIM7-214ENST00000505746 BIN2Q9UBW5 565 aaPredicted RBP14.72□□□□□ -0.05
PDLIM7-214ENST00000505746 TNPO2O14787 897 aaKnown RBP14.71□□□□□ -0.05
PDLIM7-214ENST00000505746 IDH1O75874 414 aaKnown RBP14.71□□□□□ -0.05
PDLIM7-214ENST00000505746 HLA-DOAP06340 250 aa14.71□□□□□ -0.05
PDLIM7-214ENST00000505746 ASNSP08243 561 aa14.71□□□□□ -0.05
PDLIM7-214ENST00000505746 MAP3K12Q12852 859 aa14.71□□□□□ -0.05
PDLIM7-214ENST00000505746 TREML2Q5T2D2 321 aa14.71□□□□□ -0.05
PDLIM7-214ENST00000505746 METTL16Q86W50 562 aaKnown RBP14.71□□□□□ -0.05
PDLIM7-214ENST00000505746 SLAIN1Q8ND83 568 aa14.71□□□□□ -0.05
PDLIM7-214ENST00000505746 GINM1Q9NU53 330 aa14.71□□□□□ -0.05
PDLIM7-214ENST00000505746 EXOC6BQ9Y2D4 811 aa14.71□□□□□ -0.05
PDLIM7-214ENST00000505746 GCLCP48506 637 aaPredicted RBP14.7□□□□□ -0.06
PDLIM7-214ENST00000505746 HMGCS2P54868 508 aa14.7□□□□□ -0.06
PDLIM7-214ENST00000505746 RRP1BQ14684 758 aaKnown RBP14.7□□□□□ -0.06
PDLIM7-214ENST00000505746 MTFR1Q15390 333 aa14.7□□□□□ -0.06
PDLIM7-214ENST00000505746 SH3D19Q5HYK7 790 aa14.7□□□□□ -0.06
PDLIM7-214ENST00000505746 AACSQ86V21 672 aa14.7□□□□□ -0.06
PDLIM7-214ENST00000505746 RPAP2Q8IXW5 612 aaPredicted RBP14.7□□□□□ -0.06
PDLIM7-214ENST00000505746 ANKRD13CQ8N6S4 541 aa14.7□□□□□ -0.06
PDLIM7-214ENST00000505746 COA7Q96BR5 231 aa14.7□□□□□ -0.06
PDLIM7-214ENST00000505746 WDR18Q9BV38 432 aa14.7□□□□□ -0.06
PDLIM7-214ENST00000505746 PALD1Q9ULE6 856 aa14.7□□□□□ -0.06
PDLIM7-214ENST00000505746 GABRQQ9UN88 632 aa14.7□□□□□ -0.06
PDLIM7-214ENST00000505746 HMMRO75330 724 aa14.69□□□□□ -0.06
PDLIM7-214ENST00000505746 CCL5P13501 91 aa14.69□□□□□ -0.06
PDLIM7-214ENST00000505746 USP5P45974 858 aa14.69□□□□□ -0.06
PDLIM7-214ENST00000505746 FLT3LGP49771 235 aa14.69□□□□□ -0.06
PDLIM7-214ENST00000505746 BACE1P56817 501 aa14.69□□□□□ -0.06
PDLIM7-214ENST00000505746 DYNLL1P63167 89 aaKnown RBP14.69□□□□□ -0.06
PDLIM7-214ENST00000505746 FAM110CQ1W6H9 321 aa14.69□□□□□ -0.06
PDLIM7-214ENST00000505746 MAGEB6Q8N7X4 407 aa14.69□□□□□ -0.06
PDLIM7-214ENST00000505746 CHMP4BQ9H444 224 aaKnown RBP14.69□□□□□ -0.06
PDLIM7-214ENST00000505746 TMOD4Q9NZQ9 345 aa14.69□□□□□ -0.06
PDLIM7-214ENST00000505746 DDX19BQ9UMR2 479 aa14.69□□□□□ -0.06
PDLIM7-214ENST00000505746 C19orf81C9J6K1 198 aa14.68□□□□□ -0.06
PDLIM7-214ENST00000505746 ADCY3O60266 1144 aa14.68□□□□□ -0.06
PDLIM7-214ENST00000505746 GJB1P08034 283 aa14.68□□□□□ -0.06
PDLIM7-214ENST00000505746 GJA8P48165 433 aa14.68□□□□□ -0.06
PDLIM7-214ENST00000505746 IRF5Q13568 498 aa14.68□□□□□ -0.06
PDLIM7-214ENST00000505746 TTF1Q15361 905 aaPredicted RBP14.68□□□□□ -0.06
PDLIM7-214ENST00000505746 CLASRPQ8N2M8 674 aaKnown RBP14.68□□□□□ -0.06
PDLIM7-214ENST00000505746 MIGA1Q8NAN2 632 aa14.68□□□□□ -0.06
PDLIM7-214ENST00000505746 RHPN1Q8TCX5 695 aa14.68□□□□□ -0.06
PDLIM7-214ENST00000505746 PXYLP1Q8TE99 480 aa14.68□□□□□ -0.06
PDLIM7-214ENST00000505746 KIF1BPQ96EK5 621 aa14.68□□□□□ -0.06
PDLIM7-214ENST00000505746 RNF208Q9H0X6 261 aa14.68□□□□□ -0.06
PDLIM7-214ENST00000505746 DNAJC18Q9H819 358 aa14.68□□□□□ -0.06
PDLIM7-214ENST00000505746 IL1RAPL2Q9NP60 686 aa14.68□□□□□ -0.06
PDLIM7-214ENST00000505746 SAP30BPQ9UHR5 308 aaKnown RBP14.68□□□□□ -0.06
PDLIM7-214ENST00000505746 RBBP6Q7Z6E9 1792 aaKnown RBP14.68□□□□□ -0.06
PDLIM7-214ENST00000505746 CAPN2P17655 700 aa14.67□□□□□ -0.06
PDLIM7-214ENST00000505746 MTMR2Q13614 643 aa14.67□□□□□ -0.06
PDLIM7-214ENST00000505746 ASCC2Q9H1I8 757 aaPredicted RBP14.67□□□□□ -0.06
PDLIM7-214ENST00000505746 ANTXR1Q9H6X2 564 aa14.67□□□□□ -0.06
PDLIM7-214ENST00000505746 NDUFB9Q9Y6M9 179 aa14.67□□□□□ -0.06
PDLIM7-214ENST00000505746 DOCK1Q14185 1865 aa14.67□□□□□ -0.06
PDLIM7-214ENST00000505746 PDE4DIPQ5VU43 2346 aa14.66□□□□□ -0.06
PDLIM7-214ENST00000505746 CENPFP49454 3210 aa14.66□□□□□ -0.06
PDLIM7-214ENST00000505746 USP17L10C9JJH3 530 aa14.66□□□□□ -0.06
PDLIM7-214ENST00000505746 RAB11FIP3O75154 756 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms