RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 NUP98P52948 1817 aa5.55□□□□□ -1.52
CPNE4-204ENST00000505331 LTBP2Q14767 1821 aa5.55□□□□□ -1.52
CPNE4-204ENST00000505331 GAKO14976 1311 aa5.54□□□□□ -1.52
CPNE4-204ENST00000505331 PSME4Q14997 1843 aa5.54□□□□□ -1.52
CPNE4-204ENST00000505331 KBTBD13C9JR72 458 aa5.54□□□□□ -1.52
CPNE4-204ENST00000505331 SLC5A1P13866 664 aa5.54□□□□□ -1.52
CPNE4-204ENST00000505331 TLE2Q04725 743 aa5.54□□□□□ -1.52
CPNE4-204ENST00000505331 AIMP1Q12904 312 aaKnown RBP5.54□□□□□ -1.52
CPNE4-204ENST00000505331 RTL5Q5HYW3 569 aaPredicted RBP5.54□□□□□ -1.52
CPNE4-204ENST00000505331 EPHA10Q5JZY3 1008 aa5.54□□□□□ -1.52
CPNE4-204ENST00000505331 PPP2R2DQ66LE6 453 aa5.54□□□□□ -1.52
CPNE4-204ENST00000505331 GADL1Q6ZQY3 521 aa5.54□□□□□ -1.52
CPNE4-204ENST00000505331 ASCL5Q7RTU5 278 aa5.54□□□□□ -1.52
CPNE4-204ENST00000505331 FAM83AQ86UY5 434 aa5.54□□□□□ -1.52
CPNE4-204ENST00000505331 DZIP1LQ8IYY4 767 aaKnown RBP5.54□□□□□ -1.52
CPNE4-204ENST00000505331 PHACTR3Q96KR7 559 aa5.54□□□□□ -1.52
CPNE4-204ENST00000505331 CDC5LQ99459 802 aaKnown RBP5.54□□□□□ -1.52
CPNE4-204ENST00000505331 ISCA1Q9BUE6 129 aa5.54□□□□□ -1.52
CPNE4-204ENST00000505331 ZNF112Q9UJU3 913 aa5.54□□□□□ -1.52
CPNE4-204ENST00000505331 DAGLAQ9Y4D2 1042 aa5.54□□□□□ -1.52
CPNE4-204ENST00000505331 KMT2BQ9UMN6 2715 aaPredicted RBP5.54□□□□□ -1.52
CPNE4-204ENST00000505331 MAST2Q6P0Q8 1798 aa5.54□□□□□ -1.52
CPNE4-204ENST00000505331 CACNA1GO43497 2377 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 ZNF521Q96K83 1311 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 OTOFQ9HC10 1997 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 NCOR1O75376 2440 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 LAMB2P55268 1798 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 PRR23AA6NEV1 266 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 U2SURPO15042 1029 aaKnown RBP5.53□□□□□ -1.52
CPNE4-204ENST00000505331 KLRK1P26718 216 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 RGS2P41220 211 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 TRIM28Q13263 835 aaKnown RBP5.53□□□□□ -1.52
CPNE4-204ENST00000505331 PPIGQ13427 754 aaKnown RBP eCLIP5.53□□□□□ -1.52
CPNE4-204ENST00000505331 DCTN1Q14203 1278 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 LEXMQ3ZCV2 418 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 TMEM240Q5SV17 173 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 GJC2Q5T442 439 aaPredicted RBP5.53□□□□□ -1.52
CPNE4-204ENST00000505331 MFSD14CQ5VZR4 134 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 PSRC1Q6PGN9 363 aaPredicted RBP5.53□□□□□ -1.52
CPNE4-204ENST00000505331 MIGA2Q7L4E1 593 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 SUGP1Q8IWZ8 645 aaKnown RBP5.53□□□□□ -1.52
CPNE4-204ENST00000505331 XAGE3Q8WTP9 111 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 UPF3BQ9BZI7 483 aaKnown RBP5.53□□□□□ -1.52
CPNE4-204ENST00000505331 MTIF3Q9H2K0 278 aaKnown RBP5.53□□□□□ -1.52
CPNE4-204ENST00000505331 TMEM39AQ9NV64 488 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 AGTPBP1Q9UPW5 1226 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 YBX2Q9Y2T7 364 aaKnown RBP5.53□□□□□ -1.52
CPNE4-204ENST00000505331 ZHX2Q9Y6X8 837 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 LRRC37A2A6NM11 1700 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 CHD8Q9HCK8 2581 aa5.53□□□□□ -1.52
CPNE4-204ENST00000505331 UTYO14607 1347 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 DCHS1Q96JQ0 3298 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 SOWAHBA6NEL2 793 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 ZNF316A6NFI3 1004 aaPredicted RBP5.52□□□□□ -1.53
CPNE4-204ENST00000505331 ATP5J2-PTCD1G3V325 749 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 PDE8AO60658 829 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 IL1R1P14778 569 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 CNGA1P29973 690 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 PUS10Q3MIT2 529 aaKnown RBP5.52□□□□□ -1.53
CPNE4-204ENST00000505331 FKBP1CQ5VVH2 108 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 MFSD5Q6N075 450 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 C16orf59Q7L2K0 433 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 SLC44A5Q8NCS7 719 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 TDRD7Q8NHU6 1098 aaKnown RBP5.52□□□□□ -1.53
CPNE4-204ENST00000505331 USP6NLQ92738 828 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 FAM212AQ96EL1 285 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 APBA2Q99767 749 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 ANKRD2Q9GZV1 360 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 TMOD2Q9NZR1 351 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 AFG3L2Q9Y4W6 797 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 GTF3C3Q9Y5Q9 886 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 CHD9Q3L8U1 2897 aa5.52□□□□□ -1.53
CPNE4-204ENST00000505331 DNAH12Q6ZR08 3092 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 TIMP1P01033 207 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 ANXA1P04083 346 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 EIF2S2P20042 333 aaKnown RBP5.51□□□□□ -1.53
CPNE4-204ENST00000505331 MAPK4P31152 587 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 PRKAR2BP31323 418 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 ADCYAP1R1P41586 468 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 CRKP46108 304 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 CCL14Q16627 93 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 PLBD2Q8NHP8 589 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.51□□□□□ -1.53
CPNE4-204ENST00000505331 PBXIP1Q96AQ6 731 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 RMDN1Q96DB5 314 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 TOX2Q96NM4 488 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 CCDC85AQ96PX6 553 aaPredicted RBP5.51□□□□□ -1.53
CPNE4-204ENST00000505331 PANK3Q9H999 370 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 PICK1Q9NRD5 415 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 MORF4L1Q9UBU8 362 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 TTF2Q9UNY4 1162 aaKnown RBP5.51□□□□□ -1.53
CPNE4-204ENST00000505331 PCDHA11Q9Y5I1 949 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 TCF20Q9UGU0 1960 aaKnown RBP5.51□□□□□ -1.53
CPNE4-204ENST00000505331 CACNA1BQ00975 2339 aa5.51□□□□□ -1.53
CPNE4-204ENST00000505331 ZDBF2Q9HCK1 2354 aa5.5□□□□□ -1.53
CPNE4-204ENST00000505331 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.5□□□□□ -1.53
CPNE4-204ENST00000505331 GRXCR2A6NFK2 248 aa5.5□□□□□ -1.53
CPNE4-204ENST00000505331 RFXAPO00287 272 aa5.5□□□□□ -1.53
CPNE4-204ENST00000505331 PQBP1O60828 265 aaKnown RBP5.5□□□□□ -1.53
CPNE4-204ENST00000505331 IL9P15248 144 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms