RNA–Protein interactions for RNA: ENST00000505205.1

TRIM23-204, Transcript of tripartite motif containing 23, humanhuman

TSL 3

Gene TRIM23, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-204ENST00000505205 PRDX5P30044 214 aa11.49□□□□□ -0.57
TRIM23-204ENST00000505205 CCDC84Q86UT8 332 aaPredicted RBP11.49□□□□□ -0.57
TRIM23-204ENST00000505205 ANKRD44Q8N8A2 993 aa11.49□□□□□ -0.57
TRIM23-204ENST00000505205 WDR66Q8TBY9 1149 aa11.49□□□□□ -0.57
TRIM23-204ENST00000505205 UBE2OQ9C0C9 1292 aaKnown RBP11.49□□□□□ -0.57
TRIM23-204ENST00000505205 SRCIN1Q9C0H9 1055 aa11.49□□□□□ -0.57
TRIM23-204ENST00000505205 NBPF3Q9H094 633 aa11.49□□□□□ -0.57
TRIM23-204ENST00000505205 C11orf49Q9H6J7 331 aa11.49□□□□□ -0.57
TRIM23-204ENST00000505205 USP40Q9NVE5 1235 aa11.49□□□□□ -0.57
TRIM23-204ENST00000505205 LOC285556D6RIA3 1793 aa11.49□□□□□ -0.57
TRIM23-204ENST00000505205 IFIT1P09914 478 aaKnown RBP11.48□□□□□ -0.57
TRIM23-204ENST00000505205 PUM3Q15397 648 aaKnown RBP11.48□□□□□ -0.57
TRIM23-204ENST00000505205 RABL6Q3YEC7 729 aaPredicted RBP11.48□□□□□ -0.57
TRIM23-204ENST00000505205 TREML2Q5T2D2 321 aa11.48□□□□□ -0.57
TRIM23-204ENST00000505205 AGTPBP1Q9UPW5 1226 aa11.48□□□□□ -0.57
TRIM23-204ENST00000505205 PFASO15067 1338 aa11.48□□□□□ -0.57
TRIM23-204ENST00000505205 KIF16BQ96L93 1317 aa11.48□□□□□ -0.57
TRIM23-204ENST00000505205 MYH2Q9UKX2 1941 aa11.48□□□□□ -0.57
TRIM23-204ENST00000505205 RFX7Q2KHR2 1363 aa11.47□□□□□ -0.57
TRIM23-204ENST00000505205 UTYO14607 1347 aa11.47□□□□□ -0.57
TRIM23-204ENST00000505205 RPTORQ8N122 1335 aa11.47□□□□□ -0.57
TRIM23-204ENST00000505205 ZEB1P37275 1124 aaPredicted RBP11.47□□□□□ -0.57
TRIM23-204ENST00000505205 RGS3P49796 1198 aa11.47□□□□□ -0.57
TRIM23-204ENST00000505205 FAM110CQ1W6H9 321 aa11.47□□□□□ -0.57
TRIM23-204ENST00000505205 SH3BP5LQ7L8J4 393 aa11.47□□□□□ -0.57
TRIM23-204ENST00000505205 GUCD1Q96NT3 240 aa11.47□□□□□ -0.57
TRIM23-204ENST00000505205 HMX1Q9NP08 348 aaPredicted RBP11.47□□□□□ -0.57
TRIM23-204ENST00000505205 LRRFIP2Q9Y608 721 aaKnown RBP11.47□□□□□ -0.57
TRIM23-204ENST00000505205 DNAH12Q6ZR08 3092 aa11.47□□□□□ -0.57
TRIM23-204ENST00000505205 PRUNE2Q8WUY3 3088 aa11.46□□□□□ -0.57
TRIM23-204ENST00000505205 ATAD5Q96QE3 1844 aa11.46□□□□□ -0.57
TRIM23-204ENST00000505205 COL2A1P02458 1487 aaPredicted RBP11.46□□□□□ -0.57
TRIM23-204ENST00000505205 CCDC184Q52MB2 194 aa11.46□□□□□ -0.57
TRIM23-204ENST00000505205 GJD2Q9UKL4 321 aa11.46□□□□□ -0.57
TRIM23-204ENST00000505205 OGDHLQ9ULD0 1010 aa11.46□□□□□ -0.57
TRIM23-204ENST00000505205 DDTLA6NHG4 134 aaPredicted RBP11.45□□□□□ -0.58
TRIM23-204ENST00000505205 GALR2O43603 387 aaPredicted RBP11.45□□□□□ -0.58
TRIM23-204ENST00000505205 ENTPD3O75355 529 aa11.45□□□□□ -0.58
TRIM23-204ENST00000505205 LDHBP07195 334 aaKnown RBP11.45□□□□□ -0.58
TRIM23-204ENST00000505205 SLC5A1P13866 664 aa11.45□□□□□ -0.58
TRIM23-204ENST00000505205 CLCN6P51797 869 aa11.45□□□□□ -0.58
TRIM23-204ENST00000505205 MDM2Q00987 491 aaPredicted RBP11.45□□□□□ -0.58
TRIM23-204ENST00000505205 MAP3K10Q02779 954 aa11.45□□□□□ -0.58
TRIM23-204ENST00000505205 ZSCAN29Q8IWY8 852 aaPredicted RBP11.45□□□□□ -0.58
TRIM23-204ENST00000505205 TRIB2Q92519 343 aa11.45□□□□□ -0.58
TRIM23-204ENST00000505205 FAM161BQ96MY7 647 aa11.45□□□□□ -0.58
TRIM23-204ENST00000505205 IDI2Q9BXS1 227 aa11.45□□□□□ -0.58
TRIM23-204ENST00000505205 PNMA3Q9UL41 463 aa11.45□□□□□ -0.58
TRIM23-204ENST00000505205 SALL2Q9Y467 1007 aaPredicted RBP11.45□□□□□ -0.58
TRIM23-204ENST00000505205 FRMPD3Q5JV73 1810 aa11.44□□□□□ -0.58
TRIM23-204ENST00000505205 POTEB2H3BUK9 544 aa11.44□□□□□ -0.58
TRIM23-204ENST00000505205 CTNND1O60716 968 aaKnown RBP11.44□□□□□ -0.58
TRIM23-204ENST00000505205 MAP3K21Q5TCX8 1036 aa11.44□□□□□ -0.58
TRIM23-204ENST00000505205 LPIN2Q92539 896 aa11.44□□□□□ -0.58
TRIM23-204ENST00000505205 DDX4Q9NQI0 724 aaKnown RBP11.44□□□□□ -0.58
TRIM23-204ENST00000505205 MAST2Q6P0Q8 1798 aa11.44□□□□□ -0.58
TRIM23-204ENST00000505205 GAKO14976 1311 aa11.43□□□□□ -0.58
TRIM23-204ENST00000505205 SALL1Q9NSC2 1324 aa11.43□□□□□ -0.58
TRIM23-204ENST00000505205 FAM196BA6NMK8 535 aa11.43□□□□□ -0.58
TRIM23-204ENST00000505205 GABBR2O75899 941 aa11.43□□□□□ -0.58
TRIM23-204ENST00000505205 COL6A1P12109 1028 aa11.43□□□□□ -0.58
TRIM23-204ENST00000505205 GCLCP48506 637 aaPredicted RBP11.43□□□□□ -0.58
TRIM23-204ENST00000505205 PDAP1Q13442 181 aaKnown RBP11.43□□□□□ -0.58
TRIM23-204ENST00000505205 PICALMQ13492 652 aa11.43□□□□□ -0.58
TRIM23-204ENST00000505205 LRRC26Q2I0M4 334 aa11.43□□□□□ -0.58
TRIM23-204ENST00000505205 FAM109BQ6ICB4 259 aaPredicted RBP11.43□□□□□ -0.58
TRIM23-204ENST00000505205 PROCA1Q8NCQ7 364 aaPredicted RBP11.43□□□□□ -0.58
TRIM23-204ENST00000505205 TRPC6Q9Y210 931 aa11.43□□□□□ -0.58
TRIM23-204ENST00000505205 CDH23Q9H251 3354 aa11.42□□□□□ -0.58
TRIM23-204ENST00000505205 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.42□□□□□ -0.58
TRIM23-204ENST00000505205 EYA2O00167 538 aa11.42□□□□□ -0.58
TRIM23-204ENST00000505205 CYP2B6P20813 491 aa11.42□□□□□ -0.58
TRIM23-204ENST00000505205 RFX5P48382 616 aaPredicted RBP11.42□□□□□ -0.58
TRIM23-204ENST00000505205 HMGCS2P54868 508 aa11.42□□□□□ -0.58
TRIM23-204ENST00000505205 SPP2Q13103 211 aa11.42□□□□□ -0.58
TRIM23-204ENST00000505205 WDR63Q8IWG1 891 aa11.42□□□□□ -0.58
TRIM23-204ENST00000505205 ZFP91Q96JP5 570 aaPredicted RBP11.42□□□□□ -0.58
TRIM23-204ENST00000505205 ASCC2Q9H1I8 757 aaPredicted RBP11.42□□□□□ -0.58
TRIM23-204ENST00000505205 PEX10O60683 326 aa11.41□□□□□ -0.58
TRIM23-204ENST00000505205 PHKA1P46020 1223 aa11.41□□□□□ -0.58
TRIM23-204ENST00000505205 PSEN1P49768 467 aa11.41□□□□□ -0.58
TRIM23-204ENST00000505205 ATG9AQ7Z3C6 839 aa11.41□□□□□ -0.58
TRIM23-204ENST00000505205 SP7Q8TDD2 431 aaPredicted RBP11.41□□□□□ -0.58
TRIM23-204ENST00000505205 MORF4L1Q9UBU8 362 aa11.41□□□□□ -0.58
TRIM23-204ENST00000505205 LTBP2Q14767 1821 aa11.41□□□□□ -0.58
TRIM23-204ENST00000505205 CCND3P30281 292 aaPredicted RBP11.4□□□□□ -0.58
TRIM23-204ENST00000505205 BTDP43251 543 aa11.4□□□□□ -0.58
TRIM23-204ENST00000505205 CACNB2Q08289 660 aaPredicted RBP11.4□□□□□ -0.58
TRIM23-204ENST00000505205 PABPC4Q13310 644 aaKnown RBP eCLIP11.4□□□□□ -0.58
TRIM23-204ENST00000505205 RRP1BQ14684 758 aaKnown RBP11.4□□□□□ -0.58
TRIM23-204ENST00000505205 ATP2B3Q16720 1220 aa11.4□□□□□ -0.58
TRIM23-204ENST00000505205 ZNF280CQ8ND82 737 aa11.4□□□□□ -0.58
TRIM23-204ENST00000505205 PRDM6Q9NQX0 595 aa11.4□□□□□ -0.58
TRIM23-204ENST00000505205 GNL3LQ9NVN8 582 aaKnown RBP11.4□□□□□ -0.58
TRIM23-204ENST00000505205 DENND2AQ9ULE3 1009 aa11.4□□□□□ -0.58
TRIM23-204ENST00000505205 TBC1D12O60347 775 aa11.39□□□□□ -0.59
TRIM23-204ENST00000505205 ZNF697Q5TEC3 545 aa11.39□□□□□ -0.59
TRIM23-204ENST00000505205 LHX8Q68G74 356 aa11.39□□□□□ -0.59
TRIM23-204ENST00000505205 DZIP1Q86YF9 867 aaKnown RBP11.39□□□□□ -0.59
TRIM23-204ENST00000505205 NUDT12Q9BQG2 462 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms