RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 MBD4O95243 580 aa24.34■■□□□ 1.49
HERC6-205ENST00000504905 LCORLQ8N3X6 602 aa24.34■■□□□ 1.49
HERC6-205ENST00000504905 DHX36Q9H2U1 1008 aaKnown RBP24.34■■□□□ 1.49
HERC6-205ENST00000504905 OSBPL3Q9H4L5 887 aa24.34■■□□□ 1.49
HERC6-205ENST00000504905 VGLL4Q14135 290 aa24.33■■□□□ 1.49
HERC6-205ENST00000504905 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.33■■□□□ 1.49
HERC6-205ENST00000504905 EVI5LQ96CN4 794 aa24.33■■□□□ 1.49
HERC6-205ENST00000504905 ARMT1Q9H993 441 aa24.33■■□□□ 1.49
HERC6-205ENST00000504905 SAP30BPQ9UHR5 308 aaKnown RBP24.33■■□□□ 1.49
HERC6-205ENST00000504905 GPR25O00155 361 aa24.32■■□□□ 1.48
HERC6-205ENST00000504905 APPBP2Q92624 585 aa24.32■■□□□ 1.48
HERC6-205ENST00000504905 CFHR5Q9BXR6 569 aa24.32■■□□□ 1.48
HERC6-205ENST00000504905 PUS7LQ9H0K6 701 aaKnown RBP24.32■■□□□ 1.48
HERC6-205ENST00000504905 ELP3Q9H9T3 547 aa24.32■■□□□ 1.48
HERC6-205ENST00000504905 TRIM6-TRIM34B2RNG4 842 aa24.31■■□□□ 1.48
HERC6-205ENST00000504905 MKRN3Q13064 507 aaKnown RBP24.31■■□□□ 1.48
HERC6-205ENST00000504905 PI4KBQ9UBF8 816 aa24.31■■□□□ 1.48
HERC6-205ENST00000504905 ZNF112Q9UJU3 913 aa24.31■■□□□ 1.48
HERC6-205ENST00000504905 PALD1Q9ULE6 856 aa24.31■■□□□ 1.48
HERC6-205ENST00000504905 SIPA1L1O43166 1804 aa24.31■■□□□ 1.48
HERC6-205ENST00000504905 TBC1D12O60347 775 aa24.3■■□□□ 1.48
HERC6-205ENST00000504905 HLA-DOAP06340 250 aa24.3■■□□□ 1.48
HERC6-205ENST00000504905 PDE4AP27815 886 aa24.3■■□□□ 1.48
HERC6-205ENST00000504905 INPP5BP32019 993 aa24.3■■□□□ 1.48
HERC6-205ENST00000504905 MAP3K10Q02779 954 aa24.3■■□□□ 1.48
HERC6-205ENST00000504905 SREBF2Q12772 1141 aa24.3■■□□□ 1.48
HERC6-205ENST00000504905 SPRYD7Q5W111 196 aa24.3■■□□□ 1.48
HERC6-205ENST00000504905 ZKSCAN4Q969J2 545 aaPredicted RBP24.3■■□□□ 1.48
HERC6-205ENST00000504905 WNK4Q96J92 1243 aa24.3■■□□□ 1.48
HERC6-205ENST00000504905 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.3■■□□□ 1.48
HERC6-205ENST00000504905 FBXO46Q6PJ61 603 aaPredicted RBP24.29■■□□□ 1.48
HERC6-205ENST00000504905 CENPQQ7L2Z9 268 aaPredicted RBP24.29■■□□□ 1.48
HERC6-205ENST00000504905 SDR42E1Q8WUS8 393 aa24.29■■□□□ 1.48
HERC6-205ENST00000504905 OSBP2Q969R2 916 aa24.29■■□□□ 1.48
HERC6-205ENST00000504905 DDX60LQ5H9U9 1706 aaKnown RBP24.29■■□□□ 1.48
HERC6-205ENST00000504905 SLURP2P0DP57 97 aa24.28■■□□□ 1.48
HERC6-205ENST00000504905 ZBTB48P10074 688 aaPredicted RBP24.28■■□□□ 1.48
HERC6-205ENST00000504905 SLC4A8Q2Y0W8 1093 aa24.28■■□□□ 1.48
HERC6-205ENST00000504905 CRACR2BQ8N4Y2 399 aaPredicted RBP24.28■■□□□ 1.48
HERC6-205ENST00000504905 RILPL2Q969X0 211 aa24.28■■□□□ 1.48
HERC6-205ENST00000504905 OPTNQ96CV9 577 aa24.28■■□□□ 1.48
HERC6-205ENST00000504905 CCDC136Q96JN2 1154 aa24.28■■□□□ 1.48
HERC6-205ENST00000504905 TRIM34Q9BYJ4 488 aa24.28■■□□□ 1.48
HERC6-205ENST00000504905 HERC5Q9UII4 1024 aaKnown RBP24.28■■□□□ 1.48
HERC6-205ENST00000504905 SNCAIPQ9Y6H5 919 aa24.28■■□□□ 1.48
HERC6-205ENST00000504905 FAM196BA6NMK8 535 aa24.27■■□□□ 1.48
HERC6-205ENST00000504905 PHF20L1A8MW92 1017 aa24.27■■□□□ 1.48
HERC6-205ENST00000504905 PRKAB2O43741 272 aa24.27■■□□□ 1.48
HERC6-205ENST00000504905 DCP1AQ9NPI6 582 aaPredicted RBP24.27■■□□□ 1.48
HERC6-205ENST00000504905 ATP8A2Q9NTI2 1148 aa24.27■■□□□ 1.48
HERC6-205ENST00000504905 SLC4A4Q9Y6R1 1079 aa24.27■■□□□ 1.48
HERC6-205ENST00000504905 BAZ2AQ9UIF9 1905 aaKnown RBP24.27■■□□□ 1.48
HERC6-205ENST00000504905 DOCK1Q14185 1865 aa24.26■■□□□ 1.47
HERC6-205ENST00000504905 FKTNO75072 461 aa24.26■■□□□ 1.47
HERC6-205ENST00000504905 POLR3DP05423 398 aaPredicted RBP24.26■■□□□ 1.47
HERC6-205ENST00000504905 NOL9Q5SY16 702 aaKnown RBP24.26■■□□□ 1.47
HERC6-205ENST00000504905 TTC6Q86TZ1 520 aa24.26■■□□□ 1.47
HERC6-205ENST00000504905 FOXP4Q8IVH2 680 aaPredicted RBP24.26■■□□□ 1.47
HERC6-205ENST00000504905 DDRGK1Q96HY6 314 aa24.26■■□□□ 1.47
HERC6-205ENST00000504905 STRBPQ96SI9 672 aaKnown RBP24.26■■□□□ 1.47
HERC6-205ENST00000504905 MCM9Q9NXL9 1143 aa24.26■■□□□ 1.47
HERC6-205ENST00000504905 LAMB1P07942 1786 aa24.25■■□□□ 1.47
HERC6-205ENST00000504905 SPDYE5A6NIY4 337 aa24.25■■□□□ 1.47
HERC6-205ENST00000504905 M0R2C6 588 aa24.25■■□□□ 1.47
HERC6-205ENST00000504905 GPAA1O43292 621 aa24.25■■□□□ 1.47
HERC6-205ENST00000504905 GJA5P36382 358 aa24.25■■□□□ 1.47
HERC6-205ENST00000504905 ZMYM1Q5SVZ6 1142 aa24.25■■□□□ 1.47
HERC6-205ENST00000504905 ERO1BQ86YB8 467 aa24.25■■□□□ 1.47
HERC6-205ENST00000504905 CNKSR2Q8WXI2 1034 aa24.25■■□□□ 1.47
HERC6-205ENST00000504905 OTUD5Q96G74 571 aa24.25■■□□□ 1.47
HERC6-205ENST00000504905 ATAD5Q96QE3 1844 aa24.24■■□□□ 1.47
HERC6-205ENST00000504905 CTNND1O60716 968 aaKnown RBP24.24■■□□□ 1.47
HERC6-205ENST00000504905 METTL16Q86W50 562 aaKnown RBP24.24■■□□□ 1.47
HERC6-205ENST00000504905 TICAM2Q86XR7 235 aa24.24■■□□□ 1.47
HERC6-205ENST00000504905 SCYL3Q8IZE3 742 aa24.24■■□□□ 1.47
HERC6-205ENST00000504905 PICK1Q9NRD5 415 aa24.24■■□□□ 1.47
HERC6-205ENST00000504905 MANSC4A6NHS7 340 aaPredicted RBP24.23■■□□□ 1.47
HERC6-205ENST00000504905 ALDH1A1P00352 501 aa24.23■■□□□ 1.47
HERC6-205ENST00000504905 SEC62Q99442 399 aaKnown RBP24.23■■□□□ 1.47
HERC6-205ENST00000504905 EHD4Q9H223 541 aa24.23■■□□□ 1.47
HERC6-205ENST00000504905 R3HDMLQ9H3Y0 253 aa24.23■■□□□ 1.47
HERC6-205ENST00000504905 GNAT2P19087 354 aa24.22■■□□□ 1.47
HERC6-205ENST00000504905 INHBEP58166 350 aa24.22■■□□□ 1.47
HERC6-205ENST00000504905 TTC22Q5TAA0 569 aa24.22■■□□□ 1.47
HERC6-205ENST00000504905 AMOTL1Q8IY63 956 aa24.22■■□□□ 1.47
HERC6-205ENST00000504905 DNAJC18Q9H819 358 aa24.22■■□□□ 1.47
HERC6-205ENST00000504905 SERPINB13Q9UIV8 391 aa24.22■■□□□ 1.47
HERC6-205ENST00000504905 PLCD1P51178 756 aa24.21■■□□□ 1.47
HERC6-205ENST00000504905 PPATQ06203 517 aa24.21■■□□□ 1.47
HERC6-205ENST00000504905 PPIL2Q13356 520 aa24.21■■□□□ 1.47
HERC6-205ENST00000504905 HELLSQ9NRZ9 838 aa24.2■■□□□ 1.46
HERC6-205ENST00000504905 GSG1L2A8MUP6 293 aa24.19■■□□□ 1.46
HERC6-205ENST00000504905 CYP2D6P10635 497 aa24.19■■□□□ 1.46
HERC6-205ENST00000504905 CAP2P40123 477 aa24.19■■□□□ 1.46
HERC6-205ENST00000504905 GTF2A2P52657 109 aa24.19■■□□□ 1.46
HERC6-205ENST00000504905 ERICH6BQ5W0A0 696 aa24.19■■□□□ 1.46
HERC6-205ENST00000504905 GIMAP6Q6P9H5 292 aa24.19■■□□□ 1.46
HERC6-205ENST00000504905 MYH8P13535 1937 aa24.18■■□□□ 1.46
HERC6-205ENST00000504905 USP17L12C9JPN9 530 aa24.18■■□□□ 1.46
HERC6-205ENST00000504905 USP17L21D6R901 530 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms