RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 FANCBQ8NB91 859 aa11.18□□□□□ -0.62
CSF1R-203ENST00000504875 ZBTB9Q96C00 473 aa11.18□□□□□ -0.62
CSF1R-203ENST00000504875 CRNKL1Q9BZJ0 848 aaKnown RBP11.18□□□□□ -0.62
CSF1R-203ENST00000504875 V9GY48 417 aaPredicted RBP11.18□□□□□ -0.62
CSF1R-203ENST00000504875 A0A1W2PQ27 194 aa11.18□□□□□ -0.62
CSF1R-203ENST00000504875 A0A1W2PQ64 194 aa11.18□□□□□ -0.62
CSF1R-203ENST00000504875 A0A1W2PQD8 194 aa11.18□□□□□ -0.62
CSF1R-203ENST00000504875 GUCY1A2P33402 732 aa11.18□□□□□ -0.62
CSF1R-203ENST00000504875 ARID5BQ14865 1188 aa11.18□□□□□ -0.62
CSF1R-203ENST00000504875 KLHL10Q6JEL2 608 aa11.18□□□□□ -0.62
CSF1R-203ENST00000504875 C3orf67Q6ZVT6 689 aa11.18□□□□□ -0.62
CSF1R-203ENST00000504875 LINC00116Q8NCU8 138 aa11.18□□□□□ -0.62
CSF1R-203ENST00000504875 MCM9Q9NXL9 1143 aa11.18□□□□□ -0.62
CSF1R-203ENST00000504875 TCRBV5S4A2TA0A5A2 114 aa11.17□□□□□ -0.62
CSF1R-203ENST00000504875 DEXIO95424 95 aa11.17□□□□□ -0.62
CSF1R-203ENST00000504875 KRI1Q8N9T8 703 aaKnown RBP11.17□□□□□ -0.62
CSF1R-203ENST00000504875 KIAA1524Q8TCG1 905 aa11.17□□□□□ -0.62
CSF1R-203ENST00000504875 NYXQ9GZU5 481 aa11.17□□□□□ -0.62
CSF1R-203ENST00000504875 BCL2L12Q9HB09 334 aa11.17□□□□□ -0.62
CSF1R-203ENST00000504875 MKNK2Q9HBH9 465 aa11.17□□□□□ -0.62
CSF1R-203ENST00000504875 KCNH3Q9ULD8 1083 aa11.17□□□□□ -0.62
CSF1R-203ENST00000504875 MINPP1Q9UNW1 487 aa11.17□□□□□ -0.62
CSF1R-203ENST00000504875 WDHD1O75717 1129 aaPredicted RBP11.17□□□□□ -0.62
CSF1R-203ENST00000504875 CMA1P23946 247 aa11.17□□□□□ -0.62
CSF1R-203ENST00000504875 UBE4AQ14139 1066 aa11.17□□□□□ -0.62
CSF1R-203ENST00000504875 NOSTRINQ8IVI9 506 aa11.17□□□□□ -0.62
CSF1R-203ENST00000504875 CACTINQ8WUQ7 758 aaKnown RBP11.17□□□□□ -0.62
CSF1R-203ENST00000504875 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.17□□□□□ -0.62
CSF1R-203ENST00000504875 SFPQP23246 707 aaKnown RBP eCLIP11.17□□□□□ -0.62
CSF1R-203ENST00000504875 LIFRP42702 1097 aa11.17□□□□□ -0.62
CSF1R-203ENST00000504875 BAZ2BQ9UIF8 2168 aaKnown RBP11.17□□□□□ -0.62
CSF1R-203ENST00000504875 SMIM22K7EJ46 135 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 AFMP43652 599 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 EVCP57679 992 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 NLRP5P59047 1200 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.16□□□□□ -0.62
CSF1R-203ENST00000504875 POLR2DO15514 142 aaKnown RBP11.16□□□□□ -0.62
CSF1R-203ENST00000504875 ALX1Q15699 326 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 CCDC144BQ3MJ40 725 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 ENGASEQ8NFI3 743 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 PRIMPOLQ96LW4 560 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 CEP131Q9UPN4 1083 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 WDR19Q8NEZ3 1342 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 FMNL1O95466 1100 aaPredicted RBP11.16□□□□□ -0.62
CSF1R-203ENST00000504875 PTPN21Q16825 1174 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 ADGRA1Q86SQ6 560 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 ZNF710Q8N1W2 664 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 CCDC112Q8NEF3 446 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 DHX58Q96C10 678 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 ZFP91Q96JP5 570 aaPredicted RBP11.16□□□□□ -0.62
CSF1R-203ENST00000504875 SPATA31A5Q5VU36 1347 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 SPATA31A7Q8IWB4 1347 aa11.16□□□□□ -0.62
CSF1R-203ENST00000504875 CCDC66A2RUB6 948 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 IFNAR1P17181 557 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 KLRK1P26718 216 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 NLRP12P59046 1061 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 IRX3P78415 501 aaPredicted RBP11.15□□□□□ -0.62
CSF1R-203ENST00000504875 IQCB1Q15051 598 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 PTPN14Q15678 1187 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 PTF1AQ7RTS3 328 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 STAG1Q8WVM7 1258 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 XPO4Q9C0E2 1151 aaKnown RBP11.15□□□□□ -0.62
CSF1R-203ENST00000504875 BSDC1Q9NW68 430 aaPredicted RBP11.15□□□□□ -0.62
CSF1R-203ENST00000504875 RTL9Q8NET4 1388 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 PES1O00541 588 aaKnown RBP11.15□□□□□ -0.62
CSF1R-203ENST00000504875 RAD21O60216 631 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 KCNA4P22459 653 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 PRDX5P30044 214 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 UBASH3AP57075 661 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 PDE4BQ07343 736 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 CLEC4GQ6UXB4 293 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 RBM43Q6ZSC3 357 aaKnown RBP11.15□□□□□ -0.62
CSF1R-203ENST00000504875 ZSCAN10Q96SZ4 725 aaPredicted RBP11.15□□□□□ -0.62
CSF1R-203ENST00000504875 STX8Q9UNK0 236 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 TRIM75PA6NK02 468 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 G3V3G9 751 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 CUTAO60888 179 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 ZNF174Q15697 407 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 RILPL1Q5EBL4 403 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 DCAF8Q5TAQ9 597 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 SGMS1Q86VZ5 419 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 PLA2G4DQ86XP0 818 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 FAM177A1Q8N128 213 aaPredicted RBP11.15□□□□□ -0.62
CSF1R-203ENST00000504875 RPGRQ92834 1020 aaKnown RBP11.15□□□□□ -0.62
CSF1R-203ENST00000504875 SMARCE1Q969G3 411 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 FAM84BQ96KN1 310 aaPredicted RBP11.15□□□□□ -0.62
CSF1R-203ENST00000504875 TRIM34Q9BYJ4 488 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 USP21Q9UK80 565 aa11.15□□□□□ -0.62
CSF1R-203ENST00000504875 RIOK3O14730 519 aaKnown RBP11.14□□□□□ -0.63
CSF1R-203ENST00000504875 ZNF827Q17R98 1081 aa11.14□□□□□ -0.63
CSF1R-203ENST00000504875 GPR101Q96P66 508 aaPredicted RBP11.14□□□□□ -0.63
CSF1R-203ENST00000504875 MROH7-TTC4A0A0A0MT08 1334 aa11.14□□□□□ -0.63
CSF1R-203ENST00000504875 MMP1P03956 469 aa11.14□□□□□ -0.63
CSF1R-203ENST00000504875 CRACR2BQ8N4Y2 399 aaPredicted RBP11.14□□□□□ -0.63
CSF1R-203ENST00000504875 OXER1Q8TDS5 423 aa11.14□□□□□ -0.63
CSF1R-203ENST00000504875 ANKRD2Q9GZV1 360 aa11.14□□□□□ -0.63
CSF1R-203ENST00000504875 KAT14Q9H8E8 782 aa11.14□□□□□ -0.63
CSF1R-203ENST00000504875 NMT2O60551 498 aa11.14□□□□□ -0.63
CSF1R-203ENST00000504875 CYP2D6P10635 497 aa11.14□□□□□ -0.63
CSF1R-203ENST00000504875 KRT2P35908 639 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 186.3 ms