RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 ANGEL1Q9UNK9 670 aaKnown RBP11.93□□□□□ -0.5
DDX41-203ENST00000504781 SMC3Q9UQE7 1217 aa11.93□□□□□ -0.5
DDX41-203ENST00000504781 DICER1Q9UPY3 1922 aaKnown RBP11.93□□□□□ -0.5
DDX41-203ENST00000504781 F8W031 263 aaPredicted RBP11.92□□□□□ -0.5
DDX41-203ENST00000504781 KDM4AO75164 1064 aa11.92□□□□□ -0.5
DDX41-203ENST00000504781 USP17L8P0C7I0 530 aa11.92□□□□□ -0.5
DDX41-203ENST00000504781 SCNN1DP51172 638 aa11.92□□□□□ -0.5
DDX41-203ENST00000504781 ANTXR2P58335 489 aa11.92□□□□□ -0.5
DDX41-203ENST00000504781 COL9A3Q14050 684 aaPredicted RBP11.92□□□□□ -0.5
DDX41-203ENST00000504781 CDC42EP5Q6NZY7 148 aa11.92□□□□□ -0.5
DDX41-203ENST00000504781 SYNE3Q6ZMZ3 975 aa11.92□□□□□ -0.5
DDX41-203ENST00000504781 NOL8Q76FK4 1167 aaKnown RBP11.92□□□□□ -0.5
DDX41-203ENST00000504781 CYB5R4Q7L1T6 521 aa11.92□□□□□ -0.5
DDX41-203ENST00000504781 SGMS1Q86VZ5 419 aa11.92□□□□□ -0.5
DDX41-203ENST00000504781 IQCA1Q86XH1 822 aa11.92□□□□□ -0.5
DDX41-203ENST00000504781 KIAA0825Q8IV33 1275 aa11.92□□□□□ -0.5
DDX41-203ENST00000504781 ZNF444Q8N0Y2 327 aaPredicted RBP11.92□□□□□ -0.5
DDX41-203ENST00000504781 TCEANC2Q96MN5 208 aa11.92□□□□□ -0.5
DDX41-203ENST00000504781 MXD3Q9BW11 206 aa11.92□□□□□ -0.5
DDX41-203ENST00000504781 IDI2Q9BXS1 227 aa11.92□□□□□ -0.5
DDX41-203ENST00000504781 INCENPQ9NQS7 918 aa11.92□□□□□ -0.5
DDX41-203ENST00000504781 FOXD4L1Q9NU39 408 aa11.92□□□□□ -0.5
DDX41-203ENST00000504781 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.92□□□□□ -0.5
DDX41-203ENST00000504781 GJA3Q9Y6H8 435 aa11.92□□□□□ -0.5
DDX41-203ENST00000504781 IFIT3O14879 490 aaKnown RBP11.91□□□□□ -0.5
DDX41-203ENST00000504781 PDCP20941 246 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 RCAN1P53805 252 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 EIF6P56537 245 aaKnown RBP11.91□□□□□ -0.5
DDX41-203ENST00000504781 CXCL9Q07325 125 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 APOBRQ0VD83 1088 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 RAB3GAP1Q15042 981 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 CIAPIN1Q6FI81 312 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 CLEC17AQ6ZS10 378 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 CHST3Q7LGC8 479 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 CCDC83Q8IWF9 413 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 MTMR14Q8NCE2 650 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 RGS22Q8NE09 1264 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 LRRC2Q9BYS8 371 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 DHX36Q9H2U1 1008 aaKnown RBP11.91□□□□□ -0.5
DDX41-203ENST00000504781 TAF1DQ9H5J8 278 aaPredicted RBP11.91□□□□□ -0.5
DDX41-203ENST00000504781 MKNK2Q9HBH9 465 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 TOMM22Q9NS69 142 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 TCP11L1Q9NUJ3 509 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 HACL1Q9UJ83 578 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 TACC3Q9Y6A5 838 aa11.91□□□□□ -0.5
DDX41-203ENST00000504781 PSMD14O00487 310 aa11.9□□□□□ -0.5
DDX41-203ENST00000504781 SH2B2O14492 632 aaPredicted RBP11.9□□□□□ -0.5
DDX41-203ENST00000504781 LARGE1O95461 756 aa11.9□□□□□ -0.5
DDX41-203ENST00000504781 RPS12P25398 132 aaKnown RBP11.9□□□□□ -0.5
DDX41-203ENST00000504781 RBM5P52756 815 aaKnown RBP eCLIP11.9□□□□□ -0.5
DDX41-203ENST00000504781 TMEM67Q5HYA8 995 aa11.9□□□□□ -0.5
DDX41-203ENST00000504781 RRP12Q5JTH9 1297 aaKnown RBP11.9□□□□□ -0.5
DDX41-203ENST00000504781 LDHDQ86WU2 507 aa11.9□□□□□ -0.5
DDX41-203ENST00000504781 FOXP4Q8IVH2 680 aaPredicted RBP11.9□□□□□ -0.5
DDX41-203ENST00000504781 MAPKAPK5Q8IW41 473 aa11.9□□□□□ -0.5
DDX41-203ENST00000504781 NECAB1Q8N987 351 aa11.9□□□□□ -0.5
DDX41-203ENST00000504781 ANKS1AQ92625 1134 aa11.9□□□□□ -0.5
DDX41-203ENST00000504781 GTF3C6Q969F1 213 aa11.9□□□□□ -0.5
DDX41-203ENST00000504781 L3MBTL3Q96JM7 780 aaPredicted RBP11.9□□□□□ -0.5
DDX41-203ENST00000504781 UBAC1Q9BSL1 405 aa11.9□□□□□ -0.5
DDX41-203ENST00000504781 SCN9AQ15858 1988 aa11.9□□□□□ -0.5
DDX41-203ENST00000504781 BAZ2AQ9UIF9 1905 aaKnown RBP11.9□□□□□ -0.51
DDX41-203ENST00000504781 NEDD4P46934 1319 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 PSME4Q14997 1843 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 CYP2D7A0A087X1C5 515 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 CCDC69A6NI79 296 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 FZD9O00144 591 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 RANBP6O60518 1105 aaKnown RBP11.89□□□□□ -0.51
DDX41-203ENST00000504781 ENTPD3O75355 529 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 WDHD1O75717 1129 aaPredicted RBP11.89□□□□□ -0.51
DDX41-203ENST00000504781 RAD17O75943 681 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 EPHX2P34913 555 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 PLCD1P51178 756 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 HMGN5P82970 282 aaKnown RBP11.89□□□□□ -0.51
DDX41-203ENST00000504781 WTAPQ15007 396 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 DLGAP5Q15398 846 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 SEC23AQ15436 765 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 CFAP100Q494V2 611 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 FKBP1CQ5VVH2 108 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 C16orf86Q6ZW13 317 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 DGKHQ86XP1 1220 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 JMYQ8N9B5 988 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 DPF2Q92785 391 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 ZSCAN10Q96SZ4 725 aaPredicted RBP11.89□□□□□ -0.51
DDX41-203ENST00000504781 LY9Q9HBG7 655 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 SWAP70Q9UH65 585 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 BRPF3Q9ULD4 1205 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 KIF3AQ9Y496 699 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 ROBO3Q96MS0 1386 aa11.89□□□□□ -0.51
DDX41-203ENST00000504781 FLT1P17948 1338 aa11.88□□□□□ -0.51
DDX41-203ENST00000504781 KLF18A0A0U1RQI7 1052 aa11.88□□□□□ -0.51
DDX41-203ENST00000504781 CCDC196A0A1B0GTZ2 297 aa11.88□□□□□ -0.51
DDX41-203ENST00000504781 CALM1P0DP23 149 aa11.88□□□□□ -0.51
DDX41-203ENST00000504781 CALM2P0DP24 149 aa11.88□□□□□ -0.51
DDX41-203ENST00000504781 CALM3P0DP25 149 aa11.88□□□□□ -0.51
DDX41-203ENST00000504781 LMOD1P29536 600 aaPredicted RBP11.88□□□□□ -0.51
DDX41-203ENST00000504781 CDK8P49336 464 aa11.88□□□□□ -0.51
DDX41-203ENST00000504781 SCRN1Q12765 414 aa11.88□□□□□ -0.51
DDX41-203ENST00000504781 CPLX2Q6PUV4 134 aaKnown RBP11.88□□□□□ -0.51
DDX41-203ENST00000504781 NFXL1Q6ZNB6 911 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms