RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 CCDC84Q86UT8 332 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-211ENST00000504318 ZSCAN29Q8IWY8 852 aaPredicted RBP17.11■□□□□ 0.33
PDLIM7-211ENST00000504318 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.11■□□□□ 0.33
PDLIM7-211ENST00000504318 KIF1BPQ96EK5 621 aa17.11■□□□□ 0.33
PDLIM7-211ENST00000504318 ARHGAP39Q9C0H5 1083 aa17.11■□□□□ 0.33
PDLIM7-211ENST00000504318 MGAMO43451 1857 aa17.1■□□□□ 0.33
PDLIM7-211ENST00000504318 PDHXO00330 501 aa17.1■□□□□ 0.33
PDLIM7-211ENST00000504318 JAG1P78504 1218 aa17.1■□□□□ 0.33
PDLIM7-211ENST00000504318 TGFBRAP1Q8WUH2 860 aa17.1■□□□□ 0.33
PDLIM7-211ENST00000504318 ZHX2Q9Y6X8 837 aa17.1■□□□□ 0.33
PDLIM7-211ENST00000504318 LACTBP83111 547 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-211ENST00000504318 MAPKAPK5Q8IW41 473 aa17.09■□□□□ 0.33
PDLIM7-211ENST00000504318 RIOK1Q9BRS2 568 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-211ENST00000504318 EFCC1Q9HA90 598 aa17.09■□□□□ 0.33
PDLIM7-211ENST00000504318 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.09■□□□□ 0.332e-6■■■■■ 52.9
PDLIM7-211ENST00000504318 KIAA0100Q14667 2235 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-211ENST00000504318 TCRBV5S4A2TA0A5A2 114 aa17.08■□□□□ 0.32
PDLIM7-211ENST00000504318 RAB11FIP3O75154 756 aa17.08■□□□□ 0.32
PDLIM7-211ENST00000504318 HMMRO75330 724 aa17.08■□□□□ 0.32
PDLIM7-211ENST00000504318 BAG3O95817 575 aa17.08■□□□□ 0.32
PDLIM7-211ENST00000504318 BCRP11274 1271 aa17.08■□□□□ 0.32
PDLIM7-211ENST00000504318 PLCG2P16885 1265 aa17.08■□□□□ 0.32
PDLIM7-211ENST00000504318 CYP7A1P22680 504 aa17.08■□□□□ 0.32
PDLIM7-211ENST00000504318 CAP2P40123 477 aa17.08■□□□□ 0.32
PDLIM7-211ENST00000504318 MLLT1Q03111 559 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-211ENST00000504318 SHROOM1Q2M3G4 852 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-211ENST00000504318 ARMC5Q96C12 935 aa17.08■□□□□ 0.32
PDLIM7-211ENST00000504318 DHX36Q9H2U1 1008 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-211ENST00000504318 HERC5Q9UII4 1024 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-211ENST00000504318 MYH7P12883 1935 aa17.08■□□□□ 0.32
PDLIM7-211ENST00000504318 NAV1Q8NEY1 1877 aa17.07■□□□□ 0.32
PDLIM7-211ENST00000504318 IDH1O75874 414 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-211ENST00000504318 CENPBP07199 599 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-211ENST00000504318 TMED8Q6PL24 325 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-211ENST00000504318 CLASRPQ8N2M8 674 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-211ENST00000504318 MAGEB6Q8N7X4 407 aa17.07■□□□□ 0.32
PDLIM7-211ENST00000504318 PICK1Q9NRD5 415 aa17.07■□□□□ 0.32
PDLIM7-211ENST00000504318 PI4KBQ9UBF8 816 aa17.07■□□□□ 0.32
PDLIM7-211ENST00000504318 CPA4Q9UI42 421 aa17.07■□□□□ 0.32
PDLIM7-211ENST00000504318 SLC45A1Q9Y2W3 748 aa17.07■□□□□ 0.32
PDLIM7-211ENST00000504318 PDE4DIPQ5VU43 2346 aa17.06■□□□□ 0.32
PDLIM7-211ENST00000504318 CYP2C8P10632 490 aa17.06■□□□□ 0.32
PDLIM7-211ENST00000504318 MIGA1Q8NAN2 632 aa17.06■□□□□ 0.32
PDLIM7-211ENST00000504318 EDC3Q96F86 508 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-211ENST00000504318 CHMP4BQ9H444 224 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-211ENST00000504318 PALD1Q9ULE6 856 aa17.06■□□□□ 0.32
PDLIM7-211ENST00000504318 DOCK3Q8IZD9 2030 aa17.06■□□□□ 0.32
PDLIM7-211ENST00000504318 APBB1O00213 710 aa17.05■□□□□ 0.32
PDLIM7-211ENST00000504318 PDE6AP16499 860 aa17.05■□□□□ 0.32
PDLIM7-211ENST00000504318 PTCH2Q9Y6C5 1203 aa17.05■□□□□ 0.32
PDLIM7-211ENST00000504318 TRIM75PA6NK02 468 aa17.04■□□□□ 0.32
PDLIM7-211ENST00000504318 ATP5JP18859 108 aa17.04■□□□□ 0.32
PDLIM7-211ENST00000504318 MAP3K12Q12852 859 aa17.04■□□□□ 0.32
PDLIM7-211ENST00000504318 SH3D19Q5HYK7 790 aa17.04■□□□□ 0.32
PDLIM7-211ENST00000504318 TREML2Q5T2D2 321 aa17.04■□□□□ 0.32
PDLIM7-211ENST00000504318 FASTKD5Q7L8L6 764 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-211ENST00000504318 ZNF333Q96JL9 665 aa17.04■□□□□ 0.32
PDLIM7-211ENST00000504318 TRIM47Q96LD4 638 aa17.04■□□□□ 0.32
PDLIM7-211ENST00000504318 NOL10Q9BSC4 688 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-211ENST00000504318 AGTPBP1Q9UPW5 1226 aa17.04■□□□□ 0.32
PDLIM7-211ENST00000504318 POTEFA5A3E0 1075 aa17.03■□□□□ 0.32
PDLIM7-211ENST00000504318 CHGBP05060 677 aa17.03■□□□□ 0.32
PDLIM7-211ENST00000504318 IFIT2P09913 472 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-211ENST00000504318 EVX2Q03828 476 aa17.03■□□□□ 0.32
PDLIM7-211ENST00000504318 SLFNL1Q499Z3 407 aa17.03■□□□□ 0.32
PDLIM7-211ENST00000504318 TATDN1Q6P1N9 297 aa17.03■□□□□ 0.32
PDLIM7-211ENST00000504318 FOXP4Q8IVH2 680 aaPredicted RBP17.03■□□□□ 0.32
PDLIM7-211ENST00000504318 PROCA1Q8NCQ7 364 aaPredicted RBP17.03■□□□□ 0.32
PDLIM7-211ENST00000504318 ZNF280CQ8ND82 737 aa17.03■□□□□ 0.32
PDLIM7-211ENST00000504318 PARK7Q99497 189 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-211ENST00000504318 SAP30BPQ9UHR5 308 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-211ENST00000504318 GOLIM4O00461 696 aa17.02■□□□□ 0.32
PDLIM7-211ENST00000504318 SMARCA5O60264 1052 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-211ENST00000504318 SPP2Q13103 211 aa17.02■□□□□ 0.32
PDLIM7-211ENST00000504318 TTF1Q15361 905 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-211ENST00000504318 CERS3Q8IU89 383 aa17.02■□□□□ 0.32
PDLIM7-211ENST00000504318 HAUS7Q99871 368 aa17.02■□□□□ 0.32
PDLIM7-211ENST00000504318 WDR18Q9BV38 432 aa17.02■□□□□ 0.32
PDLIM7-211ENST00000504318 TBC1D2Q9BYX2 928 aa17.02■□□□□ 0.32
PDLIM7-211ENST00000504318 EHD4Q9H223 541 aa17.02■□□□□ 0.32
PDLIM7-211ENST00000504318 DCTPP1Q9H773 170 aa17.02■□□□□ 0.32
PDLIM7-211ENST00000504318 PCDHB15Q9Y5E8 787 aa17.02■□□□□ 0.32
PDLIM7-211ENST00000504318 ZNF532Q9HCE3 1301 aa17.01■□□□□ 0.31
PDLIM7-211ENST00000504318 USP17L5A8MUK1 530 aa17.01■□□□□ 0.31
PDLIM7-211ENST00000504318 GNRH1P01148 92 aa17.01■□□□□ 0.31
PDLIM7-211ENST00000504318 GABPAQ06546 454 aa17.01■□□□□ 0.31
PDLIM7-211ENST00000504318 SLC9C2Q5TAH2 1124 aa17.01■□□□□ 0.31
PDLIM7-211ENST00000504318 GADL1Q6ZQY3 521 aa17.01■□□□□ 0.31
PDLIM7-211ENST00000504318 LRRCC1Q9C099 1032 aa17.01■□□□□ 0.31
PDLIM7-211ENST00000504318 BOLA2Q9H3K6 86 aa17.01■□□□□ 0.31
PDLIM7-211ENST00000504318 BAZ2AQ9UIF9 1905 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-211ENST00000504318 GDF11O95390 407 aa17■□□□□ 0.31
PDLIM7-211ENST00000504318 OSBPP22059 807 aa17■□□□□ 0.31
PDLIM7-211ENST00000504318 ADD2P35612 726 aa17■□□□□ 0.31
PDLIM7-211ENST00000504318 PSMC4P43686 418 aa17■□□□□ 0.31
PDLIM7-211ENST00000504318 PLCD1P51178 756 aa17■□□□□ 0.31
PDLIM7-211ENST00000504318 HMGCS2P54868 508 aa17■□□□□ 0.31
PDLIM7-211ENST00000504318 SLC4A8Q2Y0W8 1093 aa17■□□□□ 0.31
PDLIM7-211ENST00000504318 LCORLQ8N3X6 602 aa17■□□□□ 0.31
PDLIM7-211ENST00000504318 DNAJC2Q99543 621 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms