RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 C17orf99Q6UX52 265 aa26.89■■□□□ 1.9
LSM6-203ENST00000503982 NDUFB9Q9Y6M9 179 aa26.89■■□□□ 1.9
LSM6-203ENST00000503982 TNRC18O15417 2968 aaPredicted RBP26.88■■□□□ 1.89
LSM6-203ENST00000503982 A0A0G2JLL6 359 aaPredicted RBP26.88■■□□□ 1.89
LSM6-203ENST00000503982 FMNL1O95466 1100 aaPredicted RBP26.88■■□□□ 1.89
LSM6-203ENST00000503982 CYP2C8P10632 490 aa26.88■■□□□ 1.89
LSM6-203ENST00000503982 MOGSQ13724 837 aa26.88■■□□□ 1.89
LSM6-203ENST00000503982 PRRT2Q7Z6L0 340 aaPredicted RBP26.88■■□□□ 1.89
LSM6-203ENST00000503982 RPAP2Q8IXW5 612 aaPredicted RBP26.88■■□□□ 1.89
LSM6-203ENST00000503982 CRACR2BQ8N4Y2 399 aaPredicted RBP26.88■■□□□ 1.89
LSM6-203ENST00000503982 RHPN1Q8TCX5 695 aa26.88■■□□□ 1.89
LSM6-203ENST00000503982 TMEM106CQ9BVX2 250 aa26.88■■□□□ 1.89
LSM6-203ENST00000503982 MYH1P12882 1939 aa26.87■■□□□ 1.89
LSM6-203ENST00000503982 MYCP01106 439 aaPredicted RBP26.87■■□□□ 1.89
LSM6-203ENST00000503982 PSMC4P43686 418 aa26.87■■□□□ 1.89
LSM6-203ENST00000503982 GPAT2Q6NUI2 795 aa26.87■■□□□ 1.89
LSM6-203ENST00000503982 ADGRA1Q86SQ6 560 aa26.87■■□□□ 1.89
LSM6-203ENST00000503982 CLASRPQ8N2M8 674 aaKnown RBP26.87■■□□□ 1.89
LSM6-203ENST00000503982 DHX36Q9H2U1 1008 aaKnown RBP26.87■■□□□ 1.89
LSM6-203ENST00000503982 PI4KBQ9UBF8 816 aa26.87■■□□□ 1.89
LSM6-203ENST00000503982 MGAMO43451 1857 aa26.86■■□□□ 1.89
LSM6-203ENST00000503982 PPP4CP60510 307 aa26.86■■□□□ 1.89
LSM6-203ENST00000503982 DYNLL1P63167 89 aaKnown RBP26.86■■□□□ 1.89
LSM6-203ENST00000503982 MAGEB6Q8N7X4 407 aa26.86■■□□□ 1.89
LSM6-203ENST00000503982 SAP30BPQ9UHR5 308 aaKnown RBP26.86■■□□□ 1.89
LSM6-203ENST00000503982 HERC5Q9UII4 1024 aaKnown RBP26.86■■□□□ 1.89
LSM6-203ENST00000503982 FLT1P17948 1338 aa26.86■■□□□ 1.89
LSM6-203ENST00000503982 IGSF3O75054 1194 aa26.85■■□□□ 1.89
LSM6-203ENST00000503982 GNRH1P01148 92 aa26.85■■□□□ 1.89
LSM6-203ENST00000503982 IFIT2P09913 472 aaKnown RBP26.85■■□□□ 1.89
LSM6-203ENST00000503982 HOXD10P28358 340 aa26.85■■□□□ 1.89
LSM6-203ENST00000503982 USP5P45974 858 aa26.85■■□□□ 1.89
LSM6-203ENST00000503982 MAP3K12Q12852 859 aa26.85■■□□□ 1.89
LSM6-203ENST00000503982 SLC4A8Q2Y0W8 1093 aa26.85■■□□□ 1.89
LSM6-203ENST00000503982 MIGA1Q8NAN2 632 aa26.85■■□□□ 1.89
LSM6-203ENST00000503982 SMCR8Q8TEV9 937 aaPredicted RBP26.85■■□□□ 1.89
LSM6-203ENST00000503982 ARMC5Q96C12 935 aa26.85■■□□□ 1.89
LSM6-203ENST00000503982 KIF1BPQ96EK5 621 aa26.85■■□□□ 1.89
LSM6-203ENST00000503982 PDE4DIPQ5VU43 2346 aa26.85■■□□□ 1.89
LSM6-203ENST00000503982 POTEFA5A3E0 1075 aa26.84■■□□□ 1.89
LSM6-203ENST00000503982 HLA-DOAP06340 250 aa26.84■■□□□ 1.89
LSM6-203ENST00000503982 ANTXR1Q9H6X2 564 aa26.84■■□□□ 1.89
LSM6-203ENST00000503982 SIPA1L1O43166 1804 aa26.83■■□□□ 1.89
LSM6-203ENST00000503982 CAP2P40123 477 aa26.83■■□□□ 1.89
LSM6-203ENST00000503982 PRMT2P55345 433 aa26.83■■□□□ 1.89
LSM6-203ENST00000503982 SPP2Q13103 211 aa26.83■■□□□ 1.89
LSM6-203ENST00000503982 RAET1EQ8TD07 263 aa26.83■■□□□ 1.89
LSM6-203ENST00000503982 SH3TC2Q8TF17 1288 aa26.83■■□□□ 1.89
LSM6-203ENST00000503982 AS3MTQ9HBK9 375 aa26.83■■□□□ 1.89
LSM6-203ENST00000503982 ZBTB40Q9NUA8 1239 aa26.83■■□□□ 1.89
LSM6-203ENST00000503982 RBBP6Q7Z6E9 1792 aaKnown RBP26.83■■□□□ 1.89
LSM6-203ENST00000503982 USP17L5A8MUK1 530 aa26.82■■□□□ 1.88
LSM6-203ENST00000503982 DNAJC2Q99543 621 aaKnown RBP26.82■■□□□ 1.88
LSM6-203ENST00000503982 PALD1Q9ULE6 856 aa26.82■■□□□ 1.88
LSM6-203ENST00000503982 ADGRA2Q96PE1 1338 aa26.82■■□□□ 1.88
LSM6-203ENST00000503982 FCGRTP55899 365 aa26.81■■□□□ 1.88
LSM6-203ENST00000503982 TTF1Q15361 905 aaPredicted RBP26.81■■□□□ 1.88
LSM6-203ENST00000503982 ZNF280CQ8ND82 737 aa26.81■■□□□ 1.88
LSM6-203ENST00000503982 TRIM47Q96LD4 638 aa26.81■■□□□ 1.88
LSM6-203ENST00000503982 TBC1D2Q9BYX2 928 aa26.81■■□□□ 1.88
LSM6-203ENST00000503982 PNMA3Q9UL41 463 aa26.81■■□□□ 1.88
LSM6-203ENST00000503982 AGTPBP1Q9UPW5 1226 aa26.81■■□□□ 1.88
LSM6-203ENST00000503982 KIAA0100Q14667 2235 aaKnown RBP26.8■■□□□ 1.88
LSM6-203ENST00000503982 OSBPP22059 807 aa26.8■■□□□ 1.88
LSM6-203ENST00000503982 CERS3Q8IU89 383 aa26.8■■□□□ 1.88
LSM6-203ENST00000503982 ZNF333Q96JL9 665 aa26.8■■□□□ 1.88
LSM6-203ENST00000503982 SRRDQ9UH36 339 aa26.8■■□□□ 1.88
LSM6-203ENST00000503982 SLC45A1Q9Y2W3 748 aa26.8■■□□□ 1.88
LSM6-203ENST00000503982 MYPNQ86TC9 1320 aa26.8■■□□□ 1.88
LSM6-203ENST00000503982 RAB11FIP3O75154 756 aa26.79■■□□□ 1.88
LSM6-203ENST00000503982 GDF11O95390 407 aa26.79■■□□□ 1.88
LSM6-203ENST00000503982 HMGCS2P54868 508 aa26.79■■□□□ 1.88
LSM6-203ENST00000503982 FOXP4Q8IVH2 680 aaPredicted RBP26.79■■□□□ 1.88
LSM6-203ENST00000503982 HTTP42858 3142 aa26.79■■□□□ 1.88
LSM6-203ENST00000503982 BCRP11274 1271 aa26.78■■□□□ 1.88
LSM6-203ENST00000503982 EN2P19622 333 aaPredicted RBP26.78■■□□□ 1.88
LSM6-203ENST00000503982 CTGFP29279 349 aa26.78■■□□□ 1.88
LSM6-203ENST00000503982 PABPC4Q13310 644 aaKnown RBP eCLIP26.78■■□□□ 1.88
LSM6-203ENST00000503982 RRP1BQ14684 758 aaKnown RBP26.78■■□□□ 1.88
LSM6-203ENST00000503982 TREML2Q5T2D2 321 aa26.78■■□□□ 1.88
LSM6-203ENST00000503982 SIRT2Q8IXJ6 389 aa26.78■■□□□ 1.88
LSM6-203ENST00000503982 PROCA1Q8NCQ7 364 aaPredicted RBP26.78■■□□□ 1.88
LSM6-203ENST00000503982 BIN2Q9UBW5 565 aaPredicted RBP26.78■■□□□ 1.88
LSM6-203ENST00000503982 LOC285556D6RIA3 1793 aa26.78■■□□□ 1.88
LSM6-203ENST00000503982 ASNSP08243 561 aa26.77■■□□□ 1.88
LSM6-203ENST00000503982 MAGEB6P1A0A0J9YX57 407 aa26.76■■□□□ 1.87
LSM6-203ENST00000503982 GOLIM4O00461 696 aa26.76■■□□□ 1.87
LSM6-203ENST00000503982 C20orf194Q5TEA3 1177 aa26.76■■□□□ 1.87
LSM6-203ENST00000503982 ANKRD13CQ8N6S4 541 aa26.76■■□□□ 1.87
LSM6-203ENST00000503982 TMOD4Q9NZQ9 345 aa26.76■■□□□ 1.87
LSM6-203ENST00000503982 NAV1Q8NEY1 1877 aa26.76■■□□□ 1.87
LSM6-203ENST00000503982 PDE3AQ14432 1141 aa26.75■■□□□ 1.87
LSM6-203ENST00000503982 SLC9C2Q5TAH2 1124 aa26.75■■□□□ 1.87
LSM6-203ENST00000503982 CENPFP49454 3210 aa26.75■■□□□ 1.87
LSM6-203ENST00000503982 GRK4P32298 578 aa26.74■■□□□ 1.87
LSM6-203ENST00000503982 PRKCZQ05513 592 aa26.74■■□□□ 1.87
LSM6-203ENST00000503982 MTMR2Q13614 643 aa26.74■■□□□ 1.87
LSM6-203ENST00000503982 TMED8Q6PL24 325 aaPredicted RBP26.74■■□□□ 1.87
LSM6-203ENST00000503982 DNAJC18Q9H819 358 aa26.74■■□□□ 1.87
LSM6-203ENST00000503982 TAOK2Q9UL54 1235 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms