RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 AATFQ9NY61 560 aaKnown RBP eCLIP14.6□□□□□ -0.07
MED28-203ENST00000503945 PI4KBQ9UBF8 816 aa14.6□□□□□ -0.07
MED28-203ENST00000503945 SRRDQ9UH36 339 aa14.6□□□□□ -0.07
MED28-203ENST00000503945 EXOC6BQ9Y2D4 811 aa14.6□□□□□ -0.07
MED28-203ENST00000503945 AFG3L2Q9Y4W6 797 aa14.6□□□□□ -0.07
MED28-203ENST00000503945 MYH2Q9UKX2 1941 aa14.6□□□□□ -0.07
MED28-203ENST00000503945 MGAMO43451 1857 aa14.59□□□□□ -0.07
MED28-203ENST00000503945 H0YGN5 161 aa14.59□□□□□ -0.07
MED28-203ENST00000503945 FMNL1O95466 1100 aaPredicted RBP14.59□□□□□ -0.07
MED28-203ENST00000503945 OSBPP22059 807 aa14.59□□□□□ -0.07
MED28-203ENST00000503945 AACSQ86V21 672 aa14.59□□□□□ -0.07
MED28-203ENST00000503945 FOXP4Q8IVH2 680 aaPredicted RBP14.59□□□□□ -0.07
MED28-203ENST00000503945 CLASRPQ8N2M8 674 aaKnown RBP14.59□□□□□ -0.07
MED28-203ENST00000503945 SH3RF3Q8TEJ3 882 aaPredicted RBP14.59□□□□□ -0.07
MED28-203ENST00000503945 OSBPL5Q9H0X9 879 aaPredicted RBP14.59□□□□□ -0.07
MED28-203ENST00000503945 ZBTB40Q9NUA8 1239 aa14.59□□□□□ -0.07
MED28-203ENST00000503945 ADGRA2Q96PE1 1338 aa14.59□□□□□ -0.07
MED28-203ENST00000503945 IDH1O75874 414 aaKnown RBP14.58□□□□□ -0.08
MED28-203ENST00000503945 CYP7A1P22680 504 aa14.58□□□□□ -0.08
MED28-203ENST00000503945 HOXD10P28358 340 aa14.58□□□□□ -0.08
MED28-203ENST00000503945 GPAT2Q6NUI2 795 aa14.58□□□□□ -0.08
MED28-203ENST00000503945 RHPN1Q8TCX5 695 aa14.58□□□□□ -0.08
MED28-203ENST00000503945 TGFBRAP1Q8WUH2 860 aa14.58□□□□□ -0.08
MED28-203ENST00000503945 CEP290O15078 2479 aa14.58□□□□□ -0.08
MED28-203ENST00000503945 APBB1O00213 710 aa14.57□□□□□ -0.08
MED28-203ENST00000503945 RAB11FIP3O75154 756 aa14.57□□□□□ -0.08
MED28-203ENST00000503945 IFIT2P09913 472 aaKnown RBP14.57□□□□□ -0.08
MED28-203ENST00000503945 SLURP2P0DP57 97 aa14.57□□□□□ -0.08
MED28-203ENST00000503945 GRK4P32298 578 aa14.57□□□□□ -0.08
MED28-203ENST00000503945 MAP3K12Q12852 859 aa14.57□□□□□ -0.08
MED28-203ENST00000503945 CERS3Q8IU89 383 aa14.57□□□□□ -0.08
MED28-203ENST00000503945 RAET1EQ8TD07 263 aa14.57□□□□□ -0.08
MED28-203ENST00000503945 SHISA4Q96DD7 197 aa14.57□□□□□ -0.08
MED28-203ENST00000503945 KIF1BPQ96EK5 621 aa14.57□□□□□ -0.08
MED28-203ENST00000503945 PARK7Q99497 189 aaKnown RBP14.57□□□□□ -0.08
MED28-203ENST00000503945 TRIM34Q9BYJ4 488 aa14.57□□□□□ -0.08
MED28-203ENST00000503945 BCL11AQ9H165 835 aa14.57□□□□□ -0.08
MED28-203ENST00000503945 IL1RAPL2Q9NP60 686 aa14.57□□□□□ -0.08
MED28-203ENST00000503945 PIH1D3Q9NQM4 214 aaKnown RBP14.57□□□□□ -0.08
MED28-203ENST00000503945 TLR7Q9NYK1 1049 aaKnown RBP14.57□□□□□ -0.08
MED28-203ENST00000503945 HERC5Q9UII4 1024 aaKnown RBP14.57□□□□□ -0.08
MED28-203ENST00000503945 A0A0G2JLL6 359 aaPredicted RBP14.56□□□□□ -0.08
MED28-203ENST00000503945 TRIM75PA6NK02 468 aa14.56□□□□□ -0.08
MED28-203ENST00000503945 CYP2C8P10632 490 aa14.56□□□□□ -0.08
MED28-203ENST00000503945 CAP2P40123 477 aa14.56□□□□□ -0.08
MED28-203ENST00000503945 PDE3AQ14432 1141 aa14.56□□□□□ -0.08
MED28-203ENST00000503945 TMED8Q6PL24 325 aaPredicted RBP14.56□□□□□ -0.08
MED28-203ENST00000503945 GADL1Q6ZQY3 521 aa14.56□□□□□ -0.08
MED28-203ENST00000503945 PRRT2Q7Z6L0 340 aaPredicted RBP14.56□□□□□ -0.08
MED28-203ENST00000503945 DPF3Q92784 378 aa14.56□□□□□ -0.08
MED28-203ENST00000503945 MYPNQ86TC9 1320 aa14.56□□□□□ -0.08
MED28-203ENST00000503945 ATRNL1Q5VV63 1379 aa14.56□□□□□ -0.08
MED28-203ENST00000503945 DOCK3Q8IZD9 2030 aa14.56□□□□□ -0.08
MED28-203ENST00000503945 FAM196BA6NMK8 535 aa14.55□□□□□ -0.08
MED28-203ENST00000503945 BCRP11274 1271 aa14.55□□□□□ -0.08
MED28-203ENST00000503945 CCL5P13501 91 aa14.55□□□□□ -0.08
MED28-203ENST00000503945 SPP2Q13103 211 aa14.55□□□□□ -0.08
MED28-203ENST00000503945 TTF1Q15361 905 aaPredicted RBP14.55□□□□□ -0.08
MED28-203ENST00000503945 ADGRA1Q86SQ6 560 aa14.55□□□□□ -0.08
MED28-203ENST00000503945 MAPKAPK5Q8IW41 473 aa14.55□□□□□ -0.08
MED28-203ENST00000503945 CRACR2BQ8N4Y2 399 aaPredicted RBP14.55□□□□□ -0.08
MED28-203ENST00000503945 MAGEB6Q8N7X4 407 aa14.55□□□□□ -0.08
MED28-203ENST00000503945 TBC1D2Q9BYX2 928 aa14.55□□□□□ -0.08
MED28-203ENST00000503945 GABRQQ9UN88 632 aa14.55□□□□□ -0.08
MED28-203ENST00000503945 SLC45A1Q9Y2W3 748 aa14.55□□□□□ -0.08
MED28-203ENST00000503945 USP17L5A8MUK1 530 aa14.54□□□□□ -0.08
MED28-203ENST00000503945 USP5P45974 858 aa14.54□□□□□ -0.08
MED28-203ENST00000503945 GJA8P48165 433 aa14.54□□□□□ -0.08
MED28-203ENST00000503945 PRKCZQ05513 592 aa14.54□□□□□ -0.08
MED28-203ENST00000503945 SIRT2Q8IXJ6 389 aa14.54□□□□□ -0.08
MED28-203ENST00000503945 ZNF280CQ8ND82 737 aa14.54□□□□□ -0.08
MED28-203ENST00000503945 NKX2-3Q8TAU0 364 aa14.54□□□□□ -0.08
MED28-203ENST00000503945 RNF208Q9H0X6 261 aa14.54□□□□□ -0.08
MED28-203ENST00000503945 ANTXR1Q9H6X2 564 aa14.54□□□□□ -0.08
MED28-203ENST00000503945 AS3MTQ9HBK9 375 aa14.54□□□□□ -0.08
MED28-203ENST00000503945 BIN2Q9UBW5 565 aaPredicted RBP14.54□□□□□ -0.08
MED28-203ENST00000503945 PALD1Q9ULE6 856 aa14.54□□□□□ -0.08
MED28-203ENST00000503945 RFX7Q2KHR2 1363 aa14.54□□□□□ -0.08
MED28-203ENST00000503945 TRIOBPQ9H2D6 2365 aa14.53□□□□□ -0.08
MED28-203ENST00000503945 PHIPQ8WWQ0 1821 aa14.53□□□□□ -0.08
MED28-203ENST00000503945 DOCK2Q92608 1830 aa14.53□□□□□ -0.08
MED28-203ENST00000503945 HLA-DOAP06340 250 aa14.53□□□□□ -0.08
MED28-203ENST00000503945 GJB1P08034 283 aa14.53□□□□□ -0.08
MED28-203ENST00000503945 FCGRTP55899 365 aa14.53□□□□□ -0.08
MED28-203ENST00000503945 DYNLL1P63167 89 aaKnown RBP14.53□□□□□ -0.08
MED28-203ENST00000503945 CHRDL2Q6WN34 429 aa14.53□□□□□ -0.08
MED28-203ENST00000503945 UBE2Q1Q7Z7E8 422 aa14.53□□□□□ -0.08
MED28-203ENST00000503945 MIGA1Q8NAN2 632 aa14.53□□□□□ -0.08
MED28-203ENST00000503945 SMCR8Q8TEV9 937 aaPredicted RBP14.53□□□□□ -0.08
MED28-203ENST00000503945 NDUFB9Q9Y6M9 179 aa14.53□□□□□ -0.08
MED28-203ENST00000503945 PTPRFP10586 1907 aa14.53□□□□□ -0.08
MED28-203ENST00000503945 ASNSP08243 561 aa14.52□□□□□ -0.09
MED28-203ENST00000503945 PABPC4Q13310 644 aaKnown RBP eCLIP14.52□□□□□ -0.094e-8■□□□□ 9.3
MED28-203ENST00000503945 SLC9C2Q5TAH2 1124 aa14.52□□□□□ -0.09
MED28-203ENST00000503945 METTL16Q86W50 562 aaKnown RBP14.52□□□□□ -0.09
MED28-203ENST00000503945 UNC93B1Q9H1C4 597 aa14.52□□□□□ -0.09
MED28-203ENST00000503945 GINM1Q9NU53 330 aa14.52□□□□□ -0.09
MED28-203ENST00000503945 SAP30BPQ9UHR5 308 aaKnown RBP14.52□□□□□ -0.09
MED28-203ENST00000503945 PNMA3Q9UL41 463 aa14.52□□□□□ -0.09
MED28-203ENST00000503945 FLT1P17948 1338 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms