RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.27■■□□□ 1.16
RNF4-204ENST00000503659 MYH7P12883 1935 aa22.26■■□□□ 1.15
RNF4-204ENST00000503659 TLR2O60603 784 aa22.26■■□□□ 1.15
RNF4-204ENST00000503659 CTNND1O60716 968 aaKnown RBP22.26■■□□□ 1.15
RNF4-204ENST00000503659 RRP1P56182 461 aaKnown RBP22.26■■□□□ 1.15
RNF4-204ENST00000503659 MAPKAPK5Q8IW41 473 aa22.26■■□□□ 1.15
RNF4-204ENST00000503659 MIGA1Q8NAN2 632 aa22.26■■□□□ 1.15
RNF4-204ENST00000503659 YTHDC1Q96MU7 727 aaKnown RBP22.26■■□□□ 1.15
RNF4-204ENST00000503659 BCL11AQ9H165 835 aa22.26■■□□□ 1.15
RNF4-204ENST00000503659 PICK1Q9NRD5 415 aa22.26■■□□□ 1.15
RNF4-204ENST00000503659 MAP3K12Q12852 859 aa22.25■■□□□ 1.15
RNF4-204ENST00000503659 ANKRD23Q86SG2 305 aa22.25■■□□□ 1.15
RNF4-204ENST00000503659 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.25■■□□□ 1.15
RNF4-204ENST00000503659 ZHX2Q9Y6X8 837 aa22.25■■□□□ 1.15
RNF4-204ENST00000503659 NAV1Q8NEY1 1877 aa22.25■■□□□ 1.15
RNF4-204ENST00000503659 CXCL11O14625 94 aa22.24■■□□□ 1.15
RNF4-204ENST00000503659 RRP1BQ14684 758 aaKnown RBP22.24■■□□□ 1.15
RNF4-204ENST00000503659 LRRCC1Q9C099 1032 aa22.24■■□□□ 1.15
RNF4-204ENST00000503659 AFG3L2Q9Y4W6 797 aa22.24■■□□□ 1.15
RNF4-204ENST00000503659 LOC285556D6RIA3 1793 aa22.24■■□□□ 1.15
RNF4-204ENST00000503659 SMARCA5O60264 1052 aaPredicted RBP22.23■■□□□ 1.15
RNF4-204ENST00000503659 TTF1Q15361 905 aaPredicted RBP22.23■■□□□ 1.15
RNF4-204ENST00000503659 TMED8Q6PL24 325 aaPredicted RBP22.23■■□□□ 1.15
RNF4-204ENST00000503659 CCDC84Q86UT8 332 aaPredicted RBP22.23■■□□□ 1.15
RNF4-204ENST00000503659 EDC3Q96F86 508 aaKnown RBP22.23■■□□□ 1.15
RNF4-204ENST00000503659 DNAJC2Q99543 621 aaKnown RBP22.23■■□□□ 1.15
RNF4-204ENST00000503659 DHX36Q9H2U1 1008 aaKnown RBP22.23■■□□□ 1.15
RNF4-204ENST00000503659 PI4KBQ9UBF8 816 aa22.23■■□□□ 1.15
RNF4-204ENST00000503659 HERC5Q9UII4 1024 aaKnown RBP22.23■■□□□ 1.15
RNF4-204ENST00000503659 A0A0G2JLL6 359 aaPredicted RBP22.22■■□□□ 1.15
RNF4-204ENST00000503659 GOLIM4O00461 696 aa22.22■■□□□ 1.15
RNF4-204ENST00000503659 GNRH1P01148 92 aa22.22■■□□□ 1.15
RNF4-204ENST00000503659 KIF22Q14807 665 aa22.22■■□□□ 1.15
RNF4-204ENST00000503659 PRRT2Q7Z6L0 340 aaPredicted RBP22.22■■□□□ 1.15
RNF4-204ENST00000503659 METTL16Q86W50 562 aaKnown RBP22.22■■□□□ 1.15
RNF4-204ENST00000503659 ARMC5Q96C12 935 aa22.22■■□□□ 1.15
RNF4-204ENST00000503659 RIOK1Q9BRS2 568 aaKnown RBP22.22■■□□□ 1.15
RNF4-204ENST00000503659 DNAJC18Q9H819 358 aa22.22■■□□□ 1.15
RNF4-204ENST00000503659 PALD1Q9ULE6 856 aa22.22■■□□□ 1.15
RNF4-204ENST00000503659 ADGRA2Q96PE1 1338 aa22.22■■□□□ 1.15
RNF4-204ENST00000503659 CENPFP49454 3210 aa22.22■■□□□ 1.15
RNF4-204ENST00000503659 PDHXO00330 501 aa22.21■■□□□ 1.15
RNF4-204ENST00000503659 PDE6AP16499 860 aa22.21■■□□□ 1.15
RNF4-204ENST00000503659 ATP5JP18859 108 aa22.21■■□□□ 1.15
RNF4-204ENST00000503659 GPAT2Q6NUI2 795 aa22.21■■□□□ 1.15
RNF4-204ENST00000503659 DCTPP1Q9H773 170 aa22.21■■□□□ 1.15
RNF4-204ENST00000503659 SAP30BPQ9UHR5 308 aaKnown RBP22.21■■□□□ 1.15
RNF4-204ENST00000503659 PCDHB15Q9Y5E8 787 aa22.21■■□□□ 1.15
RNF4-204ENST00000503659 TCRBV5S4A2TA0A5A2 114 aa22.2■■□□□ 1.14
RNF4-204ENST00000503659 CAP2P40123 477 aa22.2■■□□□ 1.14
RNF4-204ENST00000503659 LACTBP83111 547 aaPredicted RBP22.2■■□□□ 1.14
RNF4-204ENST00000503659 SLC9C2Q5TAH2 1124 aa22.2■■□□□ 1.14
RNF4-204ENST00000503659 CERS3Q8IU89 383 aa22.2■■□□□ 1.14
RNF4-204ENST00000503659 BOLA2Q9H3K6 86 aa22.2■■□□□ 1.14
RNF4-204ENST00000503659 C17orf99Q6UX52 265 aa22.19■■□□□ 1.14
RNF4-204ENST00000503659 HAUS7Q99871 368 aa22.19■■□□□ 1.14
RNF4-204ENST00000503659 PAG1Q9NWQ8 432 aa22.19■■□□□ 1.14
RNF4-204ENST00000503659 ZNF532Q9HCE3 1301 aa22.18■■□□□ 1.14
RNF4-204ENST00000503659 TRIM75PA6NK02 468 aa22.18■■□□□ 1.14
RNF4-204ENST00000503659 PRMT2P55345 433 aa22.18■■□□□ 1.14
RNF4-204ENST00000503659 SLC4A8Q2Y0W8 1093 aa22.18■■□□□ 1.14
RNF4-204ENST00000503659 FASTKD5Q7L8L6 764 aaKnown RBP22.18■■□□□ 1.14
RNF4-204ENST00000503659 NBPF11Q86T75 865 aa22.18■■□□□ 1.14
RNF4-204ENST00000503659 KIAA0100Q14667 2235 aaKnown RBP22.17■■□□□ 1.14
RNF4-204ENST00000503659 MAGEB6P1A0A0J9YX57 407 aa22.17■■□□□ 1.14
RNF4-204ENST00000503659 USP5P45974 858 aa22.17■■□□□ 1.14
RNF4-204ENST00000503659 JAG1P78504 1218 aa22.17■■□□□ 1.14
RNF4-204ENST00000503659 SHROOM1Q2M3G4 852 aaPredicted RBP22.17■■□□□ 1.14
RNF4-204ENST00000503659 FOXP4Q8IVH2 680 aaPredicted RBP22.17■■□□□ 1.14
RNF4-204ENST00000503659 PARK7Q99497 189 aaKnown RBP22.17■■□□□ 1.14
RNF4-204ENST00000503659 ARHGAP39Q9C0H5 1083 aa22.17■■□□□ 1.14
RNF4-204ENST00000503659 MGAMO43451 1857 aa22.17■■□□□ 1.14
RNF4-204ENST00000503659 HLA-DOAP06340 250 aa22.16■■□□□ 1.14
RNF4-204ENST00000503659 SLFNL1Q499Z3 407 aa22.16■■□□□ 1.14
RNF4-204ENST00000503659 GADL1Q6ZQY3 521 aa22.16■■□□□ 1.14
RNF4-204ENST00000503659 CRACR2BQ8N4Y2 399 aaPredicted RBP22.16■■□□□ 1.14
RNF4-204ENST00000503659 CRBNQ96SW2 442 aa22.16■■□□□ 1.14
RNF4-204ENST00000503659 CPA4Q9UI42 421 aa22.16■■□□□ 1.14
RNF4-204ENST00000503659 SLC45A1Q9Y2W3 748 aa22.16■■□□□ 1.14
RNF4-204ENST00000503659 RBBP6Q7Z6E9 1792 aaKnown RBP22.16■■□□□ 1.14
RNF4-204ENST00000503659 CYP2C8P10632 490 aa22.15■■□□□ 1.14
RNF4-204ENST00000503659 SLC9C1Q4G0N8 1177 aa22.15■■□□□ 1.14
RNF4-204ENST00000503659 ZNF280CQ8ND82 737 aa22.15■■□□□ 1.14
RNF4-204ENST00000503659 PTCH2Q9Y6C5 1203 aa22.15■■□□□ 1.14
RNF4-204ENST00000503659 BAZ2AQ9UIF9 1905 aaKnown RBP22.14■■□□□ 1.14
RNF4-204ENST00000503659 USP17L5A8MUK1 530 aa22.14■■□□□ 1.13
RNF4-204ENST00000503659 CHGBP05060 677 aa22.14■■□□□ 1.13
RNF4-204ENST00000503659 ADD2P35612 726 aa22.14■■□□□ 1.13
RNF4-204ENST00000503659 SPP2Q13103 211 aa22.14■■□□□ 1.13
RNF4-204ENST00000503659 ZNF333Q96JL9 665 aa22.14■■□□□ 1.13
RNF4-204ENST00000503659 TBC1D2Q9BYX2 928 aa22.14■■□□□ 1.13
RNF4-204ENST00000503659 ECHDC1Q9NTX5 307 aa22.14■■□□□ 1.13
RNF4-204ENST00000503659 BRCA2P51587 3418 aa22.13■■□□□ 1.13
RNF4-204ENST00000503659 GDF11O95390 407 aa22.13■■□□□ 1.13
RNF4-204ENST00000503659 CTGFP29279 349 aa22.13■■□□□ 1.13
RNF4-204ENST00000503659 TREML2Q5T2D2 321 aa22.13■■□□□ 1.13
RNF4-204ENST00000503659 LCORLQ8N3X6 602 aa22.13■■□□□ 1.13
RNF4-204ENST00000503659 TMEM106CQ9BVX2 250 aa22.13■■□□□ 1.13
RNF4-204ENST00000503659 TRIM34Q9BYJ4 488 aa22.13■■□□□ 1.13
RNF4-204ENST00000503659 EHD4Q9H223 541 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms