RNA–Protein interactions for RNA: ENST00000503534.5

CLPTM1L-204, Transcript of CLPTM1 like, humanhuman

TSL 2

Gene CLPTM1L, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-204ENST00000503534 HMGCS2P54868 508 aa12.16□□□□□ -0.46
CLPTM1L-204ENST00000503534 IRX3P78415 501 aaPredicted RBP12.16□□□□□ -0.46
CLPTM1L-204ENST00000503534 CCDC84Q86UT8 332 aaPredicted RBP12.16□□□□□ -0.46
CLPTM1L-204ENST00000503534 WWC1Q8IX03 1113 aa12.16□□□□□ -0.46
CLPTM1L-204ENST00000503534 ZGPATQ8N5A5 531 aaKnown RBP12.16□□□□□ -0.46
CLPTM1L-204ENST00000503534 ZNF280CQ8ND82 737 aa12.16□□□□□ -0.46
CLPTM1L-204ENST00000503534 LPIN2Q92539 896 aa12.16□□□□□ -0.46
CLPTM1L-204ENST00000503534 OSBPL5Q9H0X9 879 aaPredicted RBP12.16□□□□□ -0.46
CLPTM1L-204ENST00000503534 BICC1Q9H694 974 aaKnown RBP12.16□□□□□ -0.46
CLPTM1L-204ENST00000503534 AS3MTQ9HBK9 375 aa12.16□□□□□ -0.46
CLPTM1L-204ENST00000503534 CWC22Q9HCG8 908 aaKnown RBP12.16□□□□□ -0.46
CLPTM1L-204ENST00000503534 ATAD5Q96QE3 1844 aa12.16□□□□□ -0.46
CLPTM1L-204ENST00000503534 DDTLA6NHG4 134 aaPredicted RBP12.15□□□□□ -0.46
CLPTM1L-204ENST00000503534 CCND3P30281 292 aaPredicted RBP12.15□□□□□ -0.46
CLPTM1L-204ENST00000503534 MAPK4P31152 587 aa12.15□□□□□ -0.46
CLPTM1L-204ENST00000503534 RGS2P41220 211 aa12.15□□□□□ -0.46
CLPTM1L-204ENST00000503534 SMAD3P84022 425 aaKnown RBP12.15□□□□□ -0.46
CLPTM1L-204ENST00000503534 DDX10Q13206 875 aaKnown RBP12.15□□□□□ -0.46
CLPTM1L-204ENST00000503534 PICALMQ13492 652 aa12.15□□□□□ -0.46
CLPTM1L-204ENST00000503534 RABL6Q3YEC7 729 aaPredicted RBP12.15□□□□□ -0.46
CLPTM1L-204ENST00000503534 LHX8Q68G74 356 aa12.15□□□□□ -0.46
CLPTM1L-204ENST00000503534 FAM122AQ96E09 287 aa12.15□□□□□ -0.46
CLPTM1L-204ENST00000503534 KAZALD1Q96I82 304 aa12.15□□□□□ -0.46
CLPTM1L-204ENST00000503534 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.15□□□□□ -0.46
CLPTM1L-204ENST00000503534 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.15□□□□□ -0.46
CLPTM1L-204ENST00000503534 SALL1Q9NSC2 1324 aa12.14□□□□□ -0.47
CLPTM1L-204ENST00000503534 FANCIQ9NVI1 1328 aa12.14□□□□□ -0.47
CLPTM1L-204ENST00000503534 LTBP2Q14767 1821 aa12.14□□□□□ -0.47
CLPTM1L-204ENST00000503534 TBC1D12O60347 775 aa12.14□□□□□ -0.47
CLPTM1L-204ENST00000503534 NBPF7P0C2Y1 421 aaPredicted RBP12.14□□□□□ -0.47
CLPTM1L-204ENST00000503534 PLA2G5P39877 138 aa12.14□□□□□ -0.47
CLPTM1L-204ENST00000503534 SHHQ15465 462 aa12.14□□□□□ -0.47
CLPTM1L-204ENST00000503534 SH3BP5LQ7L8J4 393 aa12.14□□□□□ -0.47
CLPTM1L-204ENST00000503534 GPRC5AQ8NFJ5 357 aa12.14□□□□□ -0.47
CLPTM1L-204ENST00000503534 TMOD4Q9NZQ9 345 aa12.14□□□□□ -0.47
CLPTM1L-204ENST00000503534 DENND2AQ9ULE3 1009 aa12.14□□□□□ -0.47
CLPTM1L-204ENST00000503534 SPTBN5Q9NRC6 3674 aaKnown RBP12.14□□□□□ -0.47
CLPTM1L-204ENST00000503534 TMEM265A0A087WTH1 108 aa12.13□□□□□ -0.47
CLPTM1L-204ENST00000503534 USP17L5A8MUK1 530 aa12.13□□□□□ -0.47
CLPTM1L-204ENST00000503534 SEMA3EO15041 775 aa12.13□□□□□ -0.47
CLPTM1L-204ENST00000503534 MSCO60682 206 aa12.13□□□□□ -0.47
CLPTM1L-204ENST00000503534 ATN1P54259 1190 aaPredicted RBP12.13□□□□□ -0.47
CLPTM1L-204ENST00000503534 SH3D19Q5HYK7 790 aa12.13□□□□□ -0.47
CLPTM1L-204ENST00000503534 DZIP1Q86YF9 867 aaKnown RBP12.13□□□□□ -0.47
CLPTM1L-204ENST00000503534 KLHDC4Q8TBB5 520 aa12.13□□□□□ -0.47
CLPTM1L-204ENST00000503534 APBA2Q99767 749 aa12.13□□□□□ -0.47
CLPTM1L-204ENST00000503534 ATP11BQ9Y2G3 1177 aa12.13□□□□□ -0.47
CLPTM1L-204ENST00000503534 UTYO14607 1347 aa12.12□□□□□ -0.47
CLPTM1L-204ENST00000503534 GAKO14976 1311 aa12.12□□□□□ -0.47
CLPTM1L-204ENST00000503534 GLRX3O76003 335 aaKnown RBP12.12□□□□□ -0.47
CLPTM1L-204ENST00000503534 RTP1P59025 263 aa12.12□□□□□ -0.47
CLPTM1L-204ENST00000503534 EXOSC9Q06265 439 aaKnown RBP12.12□□□□□ -0.47
CLPTM1L-204ENST00000503534 MFSD14CQ5VZR4 134 aa12.12□□□□□ -0.47
CLPTM1L-204ENST00000503534 GTF3C2Q8WUA4 911 aaPredicted RBP12.12□□□□□ -0.47
CLPTM1L-204ENST00000503534 TTYH1Q9H313 450 aaPredicted RBP12.12□□□□□ -0.47
CLPTM1L-204ENST00000503534 PRDM5Q9NQX1 630 aaPredicted RBP12.12□□□□□ -0.47
CLPTM1L-204ENST00000503534 RFX7Q2KHR2 1363 aa12.12□□□□□ -0.47
CLPTM1L-204ENST00000503534 VCANP13611 3396 aa12.12□□□□□ -0.47
CLPTM1L-204ENST00000503534 EYA2O00167 538 aa12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 DNM1LO00429 736 aa12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 SLURP2P0DP57 97 aa12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 CNGA1P29973 690 aa12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 HOXA7P31268 230 aaPredicted RBP12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 CAP2P40123 477 aa12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 BTDP43251 543 aa12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 HERVK_113P62684 666 aa12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 CCL14Q16627 93 aa12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 C9orf50Q5SZB4 431 aa12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 SPTY2D1Q68D10 685 aaPredicted RBP12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 GPR142Q7Z601 462 aa12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 PLEKHH3Q7Z736 793 aa12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 ANKRD44Q8N8A2 993 aa12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 LPAR1Q92633 364 aa12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 USP6NLQ92738 828 aa12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 P2RX7Q99572 595 aaKnown RBP12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 PRKRIP1Q9H875 184 aaPredicted RBP12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 DDX4Q9NQI0 724 aaKnown RBP12.11□□□□□ -0.47
CLPTM1L-204ENST00000503534 FAM196BA6NMK8 535 aa12.1□□□□□ -0.47
CLPTM1L-204ENST00000503534 ERVK-9P63128 1117 aa12.1□□□□□ -0.47
CLPTM1L-204ENST00000503534 ERVK-24P63145 666 aa12.1□□□□□ -0.47
CLPTM1L-204ENST00000503534 ATP2B3Q16720 1220 aa12.1□□□□□ -0.47
CLPTM1L-204ENST00000503534 MORN1Q5T089 497 aa12.1□□□□□ -0.47
CLPTM1L-204ENST00000503534 ARRDC4Q8NCT1 418 aa12.1□□□□□ -0.47
CLPTM1L-204ENST00000503534 EDC3Q96F86 508 aaKnown RBP12.1□□□□□ -0.47
CLPTM1L-204ENST00000503534 PAGR1Q9BTK6 254 aa12.1□□□□□ -0.47
CLPTM1L-204ENST00000503534 ABCF2Q9UG63 623 aa12.1□□□□□ -0.47
CLPTM1L-204ENST00000503534 DDX20Q9UHI6 824 aaKnown RBP12.1□□□□□ -0.47
CLPTM1L-204ENST00000503534 C19orf81C9J6K1 198 aa12.09□□□□□ -0.47
CLPTM1L-204ENST00000503534 KBTBD13C9JR72 458 aa12.09□□□□□ -0.47
CLPTM1L-204ENST00000503534 NPM3O75607 178 aaKnown RBP12.09□□□□□ -0.47
CLPTM1L-204ENST00000503534 MAP4K4O95819 1239 aaPredicted RBP12.09□□□□□ -0.47
CLPTM1L-204ENST00000503534 BACE1P56817 501 aa12.09□□□□□ -0.47
CLPTM1L-204ENST00000503534 CCNA1P78396 465 aa12.09□□□□□ -0.47
CLPTM1L-204ENST00000503534 MAP2K5Q13163 448 aa12.09□□□□□ -0.47
CLPTM1L-204ENST00000503534 MTMR2Q13614 643 aa12.09□□□□□ -0.47
CLPTM1L-204ENST00000503534 NCBP3Q53F19 620 aaKnown RBP12.09□□□□□ -0.47
CLPTM1L-204ENST00000503534 BADQ92934 168 aa12.09□□□□□ -0.47
CLPTM1L-204ENST00000503534 FAM163AQ96GL9 167 aaPredicted RBP12.09□□□□□ -0.47
CLPTM1L-204ENST00000503534 TXNRD2Q9NNW7 524 aa12.09□□□□□ -0.47
CLPTM1L-204ENST00000503534 CEP126Q9P2H0 1117 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms