RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 BCL11AQ9H165 835 aa23.74■■□□□ 1.39
UBE2D3-215ENST00000503418 PTCH2Q9Y6C5 1203 aa23.74■■□□□ 1.39
UBE2D3-215ENST00000503418 HMMRO75330 724 aa23.73■■□□□ 1.39
UBE2D3-215ENST00000503418 CYP7A1P22680 504 aa23.73■■□□□ 1.39
UBE2D3-215ENST00000503418 PPP4CP60510 307 aa23.73■■□□□ 1.39
UBE2D3-215ENST00000503418 GPAT2Q6NUI2 795 aa23.73■■□□□ 1.39
UBE2D3-215ENST00000503418 MAPKAPK5Q8IW41 473 aa23.73■■□□□ 1.39
UBE2D3-215ENST00000503418 RPAP2Q8IXW5 612 aaPredicted RBP23.73■■□□□ 1.39
UBE2D3-215ENST00000503418 ZBTB40Q9NUA8 1239 aa23.73■■□□□ 1.39
UBE2D3-215ENST00000503418 IGSF3O75054 1194 aa23.72■■□□□ 1.39
UBE2D3-215ENST00000503418 CYP2C8P10632 490 aa23.72■■□□□ 1.39
UBE2D3-215ENST00000503418 SIPA1L1O43166 1804 aa23.72■■□□□ 1.39
UBE2D3-215ENST00000503418 CENPFP49454 3210 aa23.72■■□□□ 1.39
UBE2D3-215ENST00000503418 FLT1P17948 1338 aa23.71■■□□□ 1.39
UBE2D3-215ENST00000503418 ADGRA2Q96PE1 1338 aa23.71■■□□□ 1.39
UBE2D3-215ENST00000503418 SLC9C1Q4G0N8 1177 aa23.71■■□□□ 1.39
UBE2D3-215ENST00000503418 ARMC5Q96C12 935 aa23.71■■□□□ 1.39
UBE2D3-215ENST00000503418 DHX36Q9H2U1 1008 aaKnown RBP23.71■■□□□ 1.39
UBE2D3-215ENST00000503418 CHMP4BQ9H444 224 aaKnown RBP23.71■■□□□ 1.39
UBE2D3-215ENST00000503418 ANTXR1Q9H6X2 564 aa23.71■■□□□ 1.39
UBE2D3-215ENST00000503418 PI4KBQ9UBF8 816 aa23.71■■□□□ 1.39
UBE2D3-215ENST00000503418 HERC5Q9UII4 1024 aaKnown RBP23.71■■□□□ 1.39
UBE2D3-215ENST00000503418 DYNLL1P63167 89 aaKnown RBP23.7■■□□□ 1.38
UBE2D3-215ENST00000503418 SIRT2Q8IXJ6 389 aa23.7■■□□□ 1.38
UBE2D3-215ENST00000503418 CLASRPQ8N2M8 674 aaKnown RBP23.7■■□□□ 1.38
UBE2D3-215ENST00000503418 MAGEB6Q8N7X4 407 aa23.7■■□□□ 1.38
UBE2D3-215ENST00000503418 KIF1BPQ96EK5 621 aa23.7■■□□□ 1.38
UBE2D3-215ENST00000503418 POTEFA5A3E0 1075 aa23.69■■□□□ 1.38
UBE2D3-215ENST00000503418 CAP2P40123 477 aa23.69■■□□□ 1.38
UBE2D3-215ENST00000503418 PSMC4P43686 418 aa23.69■■□□□ 1.38
UBE2D3-215ENST00000503418 MIGA1Q8NAN2 632 aa23.69■■□□□ 1.38
UBE2D3-215ENST00000503418 TRIM34Q9BYJ4 488 aa23.69■■□□□ 1.38
UBE2D3-215ENST00000503418 RBBP6Q7Z6E9 1792 aaKnown RBP23.68■■□□□ 1.38
UBE2D3-215ENST00000503418 GNRH1P01148 92 aa23.68■■□□□ 1.38
UBE2D3-215ENST00000503418 IFIT2P09913 472 aaKnown RBP23.68■■□□□ 1.38
UBE2D3-215ENST00000503418 MAP3K12Q12852 859 aa23.68■■□□□ 1.38
UBE2D3-215ENST00000503418 RRP1BQ14684 758 aaKnown RBP23.68■■□□□ 1.38
UBE2D3-215ENST00000503418 NBPF11Q86T75 865 aa23.68■■□□□ 1.38
UBE2D3-215ENST00000503418 CRACR2BQ8N4Y2 399 aaPredicted RBP23.68■■□□□ 1.38
UBE2D3-215ENST00000503418 SAP30BPQ9UHR5 308 aaKnown RBP23.68■■□□□ 1.38
UBE2D3-215ENST00000503418 PALD1Q9ULE6 856 aa23.68■■□□□ 1.38
UBE2D3-215ENST00000503418 MYH1P12882 1939 aa23.68■■□□□ 1.38
UBE2D3-215ENST00000503418 PDE4DIPQ5VU43 2346 aa23.67■■□□□ 1.38
UBE2D3-215ENST00000503418 FMNL1O95466 1100 aaPredicted RBP23.67■■□□□ 1.38
UBE2D3-215ENST00000503418 CTGFP29279 349 aa23.67■■□□□ 1.38
UBE2D3-215ENST00000503418 SLC4A8Q2Y0W8 1093 aa23.67■■□□□ 1.38
UBE2D3-215ENST00000503418 C20orf194Q5TEA3 1177 aa23.67■■□□□ 1.38
UBE2D3-215ENST00000503418 TRIM47Q96LD4 638 aa23.67■■□□□ 1.38
UBE2D3-215ENST00000503418 MGAMO43451 1857 aa23.66■■□□□ 1.38
UBE2D3-215ENST00000503418 USP5P45974 858 aa23.66■■□□□ 1.38
UBE2D3-215ENST00000503418 SPP2Q13103 211 aa23.66■■□□□ 1.38
UBE2D3-215ENST00000503418 ZNF280CQ8ND82 737 aa23.66■■□□□ 1.38
UBE2D3-215ENST00000503418 SMCR8Q8TEV9 937 aaPredicted RBP23.66■■□□□ 1.38
UBE2D3-215ENST00000503418 ZNF333Q96JL9 665 aa23.66■■□□□ 1.38
UBE2D3-215ENST00000503418 AGTPBP1Q9UPW5 1226 aa23.66■■□□□ 1.38
UBE2D3-215ENST00000503418 SLC45A1Q9Y2W3 748 aa23.66■■□□□ 1.38
UBE2D3-215ENST00000503418 KIAA0100Q14667 2235 aaKnown RBP23.65■■□□□ 1.38
UBE2D3-215ENST00000503418 USP17L5A8MUK1 530 aa23.65■■□□□ 1.38
UBE2D3-215ENST00000503418 RAB11FIP3O75154 756 aa23.65■■□□□ 1.38
UBE2D3-215ENST00000503418 MYCP01106 439 aaPredicted RBP23.65■■□□□ 1.38
UBE2D3-215ENST00000503418 HLA-DOAP06340 250 aa23.65■■□□□ 1.38
UBE2D3-215ENST00000503418 BCRP11274 1271 aa23.65■■□□□ 1.38
UBE2D3-215ENST00000503418 OSBPP22059 807 aa23.65■■□□□ 1.38
UBE2D3-215ENST00000503418 PRMT2P55345 433 aa23.65■■□□□ 1.38
UBE2D3-215ENST00000503418 CERS3Q8IU89 383 aa23.65■■□□□ 1.38
UBE2D3-215ENST00000503418 SH3TC2Q8TF17 1288 aa23.65■■□□□ 1.38
UBE2D3-215ENST00000503418 TMEM106CQ9BVX2 250 aa23.65■■□□□ 1.38
UBE2D3-215ENST00000503418 TBC1D2Q9BYX2 928 aa23.65■■□□□ 1.38
UBE2D3-215ENST00000503418 DNAJC18Q9H819 358 aa23.65■■□□□ 1.38
UBE2D3-215ENST00000503418 LOC285556D6RIA3 1793 aa23.65■■□□□ 1.38
UBE2D3-215ENST00000503418 HOXD10P28358 340 aa23.64■■□□□ 1.37
UBE2D3-215ENST00000503418 HMGCS2P54868 508 aa23.64■■□□□ 1.37
UBE2D3-215ENST00000503418 PDE3AQ14432 1141 aa23.64■■□□□ 1.37
UBE2D3-215ENST00000503418 TTF1Q15361 905 aaPredicted RBP23.64■■□□□ 1.37
UBE2D3-215ENST00000503418 TREML2Q5T2D2 321 aa23.64■■□□□ 1.37
UBE2D3-215ENST00000503418 FOXP4Q8IVH2 680 aaPredicted RBP23.64■■□□□ 1.37
UBE2D3-215ENST00000503418 DNAJC2Q99543 621 aaKnown RBP23.64■■□□□ 1.37
UBE2D3-215ENST00000503418 AS3MTQ9HBK9 375 aa23.64■■□□□ 1.37
UBE2D3-215ENST00000503418 SRRDQ9UH36 339 aa23.64■■□□□ 1.37
UBE2D3-215ENST00000503418 GDF11O95390 407 aa23.63■■□□□ 1.37
UBE2D3-215ENST00000503418 FCGRTP55899 365 aa23.63■■□□□ 1.37
UBE2D3-215ENST00000503418 PROCA1Q8NCQ7 364 aaPredicted RBP23.63■■□□□ 1.37
UBE2D3-215ENST00000503418 PNMA3Q9UL41 463 aa23.63■■□□□ 1.37
UBE2D3-215ENST00000503418 MYPNQ86TC9 1320 aa23.62■■□□□ 1.37
UBE2D3-215ENST00000503418 GOLIM4O00461 696 aa23.62■■□□□ 1.37
UBE2D3-215ENST00000503418 ASNSP08243 561 aa23.62■■□□□ 1.37
UBE2D3-215ENST00000503418 EN2P19622 333 aaPredicted RBP23.62■■□□□ 1.37
UBE2D3-215ENST00000503418 TMED8Q6PL24 325 aaPredicted RBP23.62■■□□□ 1.37
UBE2D3-215ENST00000503418 METTL16Q86W50 562 aaKnown RBP23.62■■□□□ 1.37
UBE2D3-215ENST00000503418 RAET1EQ8TD07 263 aa23.62■■□□□ 1.37
UBE2D3-215ENST00000503418 JAG1P78504 1218 aa23.6■■□□□ 1.37
UBE2D3-215ENST00000503418 SHROOM1Q2M3G4 852 aaPredicted RBP23.6■■□□□ 1.37
UBE2D3-215ENST00000503418 SLC9C2Q5TAH2 1124 aa23.6■■□□□ 1.37
UBE2D3-215ENST00000503418 ANKRD13CQ8N6S4 541 aa23.6■■□□□ 1.37
UBE2D3-215ENST00000503418 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.6■■□□□ 1.37
UBE2D3-215ENST00000503418 NAV1Q8NEY1 1877 aa23.6■■□□□ 1.37
UBE2D3-215ENST00000503418 BRCA2P51587 3418 aa23.59■■□□□ 1.37
UBE2D3-215ENST00000503418 MAGEB6P1A0A0J9YX57 407 aa23.59■■□□□ 1.37
UBE2D3-215ENST00000503418 PDE6AP16499 860 aa23.59■■□□□ 1.37
UBE2D3-215ENST00000503418 PRKCZQ05513 592 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 377.2 ms