RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 SREBF2Q12772 1141 aa21.96■■□□□ 1.11
PDLIM7-209ENST00000503346 OSBP2Q969R2 916 aa21.96■■□□□ 1.11
PDLIM7-209ENST00000503346 FAM196BA6NMK8 535 aa21.95■■□□□ 1.1
PDLIM7-209ENST00000503346 CTNND1O60716 968 aaKnown RBP21.95■■□□□ 1.1
PDLIM7-209ENST00000503346 INHBEP58166 350 aa21.95■■□□□ 1.1
PDLIM7-209ENST00000503346 TICAM2Q86XR7 235 aa21.95■■□□□ 1.1
PDLIM7-209ENST00000503346 SCYL3Q8IZE3 742 aa21.95■■□□□ 1.1
PDLIM7-209ENST00000503346 SDR42E1Q8WUS8 393 aa21.95■■□□□ 1.1
PDLIM7-209ENST00000503346 OTUD5Q96G74 571 aa21.95■■□□□ 1.1
PDLIM7-209ENST00000503346 DCP1AQ9NPI6 582 aaPredicted RBP21.95■■□□□ 1.1
PDLIM7-209ENST00000503346 ATP8A2Q9NTI2 1148 aa21.95■■□□□ 1.1
PDLIM7-209ENST00000503346 FOCADQ5VW36 1801 aa21.94■■□□□ 1.1
PDLIM7-209ENST00000503346 PRKAB2O43741 272 aa21.94■■□□□ 1.1
PDLIM7-209ENST00000503346 PDE4AP27815 886 aa21.94■■□□□ 1.1
PDLIM7-209ENST00000503346 PPATQ06203 517 aa21.94■■□□□ 1.1
PDLIM7-209ENST00000503346 TTC6Q86TZ1 520 aa21.94■■□□□ 1.1
PDLIM7-209ENST00000503346 STRBPQ96SI9 672 aaKnown RBP21.94■■□□□ 1.1
PDLIM7-209ENST00000503346 EHD4Q9H223 541 aa21.94■■□□□ 1.1
PDLIM7-209ENST00000503346 DNAJC18Q9H819 358 aa21.94■■□□□ 1.1
PDLIM7-209ENST00000503346 SAGE1Q9NXZ1 904 aa21.94■■□□□ 1.1
PDLIM7-209ENST00000503346 TESPA1A2RU30 521 aaPredicted RBP21.93■■□□□ 1.1
PDLIM7-209ENST00000503346 CTCFP49711 727 aaPredicted RBP21.93■■□□□ 1.1
PDLIM7-209ENST00000503346 PPIL2Q13356 520 aa21.93■■□□□ 1.1
PDLIM7-209ENST00000503346 MS4A4AQ96JQ5 239 aa21.93■■□□□ 1.1
PDLIM7-209ENST00000503346 MCM9Q9NXL9 1143 aa21.93■■□□□ 1.1
PDLIM7-209ENST00000503346 AK9Q5TCS8 1911 aa21.92■■□□□ 1.1
PDLIM7-209ENST00000503346 CDK5RAP2Q96SN8 1893 aa21.92■■□□□ 1.1
PDLIM7-209ENST00000503346 ZMYM1Q5SVZ6 1142 aa21.92■■□□□ 1.1
PDLIM7-209ENST00000503346 CRACR2BQ8N4Y2 399 aaPredicted RBP21.92■■□□□ 1.1
PDLIM7-209ENST00000503346 TRIM34Q9BYJ4 488 aa21.92■■□□□ 1.1
PDLIM7-209ENST00000503346 PICK1Q9NRD5 415 aa21.92■■□□□ 1.1
PDLIM7-209ENST00000503346 RNF186Q9NXI6 227 aa21.92■■□□□ 1.1
PDLIM7-209ENST00000503346 SLC4A4Q9Y6R1 1079 aa21.92■■□□□ 1.1
PDLIM7-209ENST00000503346 MYH7P12883 1935 aa21.91■■□□□ 1.1
PDLIM7-209ENST00000503346 M0R2C6 588 aa21.91■■□□□ 1.1
PDLIM7-209ENST00000503346 IRF6O14896 467 aa21.91■■□□□ 1.1
PDLIM7-209ENST00000503346 GPAA1O43292 621 aa21.91■■□□□ 1.1
PDLIM7-209ENST00000503346 POLR3DP05423 398 aaPredicted RBP21.91■■□□□ 1.1
PDLIM7-209ENST00000503346 HSPA8P11142 646 aaKnown RBP21.91■■□□□ 1.1
PDLIM7-209ENST00000503346 PTPRAP18433 802 aa21.91■■□□□ 1.1
PDLIM7-209ENST00000503346 CAP2P40123 477 aa21.91■■□□□ 1.1
PDLIM7-209ENST00000503346 PLCD1P51178 756 aa21.91■■□□□ 1.1
PDLIM7-209ENST00000503346 GTF2A2P52657 109 aa21.91■■□□□ 1.1
PDLIM7-209ENST00000503346 RRP1BQ14684 758 aaKnown RBP21.91■■□□□ 1.1
PDLIM7-209ENST00000503346 SLC4A8Q2Y0W8 1093 aa21.91■■□□□ 1.1
PDLIM7-209ENST00000503346 SERPINB13Q9UIV8 391 aa21.91■■□□□ 1.1
PDLIM7-209ENST00000503346 SIPA1L1O43166 1804 aa21.9■■□□□ 1.1
PDLIM7-209ENST00000503346 NEFLP07196 543 aa21.9■■□□□ 1.1
PDLIM7-209ENST00000503346 GNAT2P19087 354 aa21.9■■□□□ 1.1
PDLIM7-209ENST00000503346 KCNH4Q9UQ05 1017 aa21.9■■□□□ 1.1
PDLIM7-209ENST00000503346 DDX60LQ5H9U9 1706 aaKnown RBP21.89■■□□□ 1.1
PDLIM7-209ENST00000503346 TRIM6-TRIM34B2RNG4 842 aa21.89■■□□□ 1.09
PDLIM7-209ENST00000503346 GABPAQ06546 454 aa21.89■■□□□ 1.09
PDLIM7-209ENST00000503346 SNAPC2Q13487 334 aa21.89■■□□□ 1.09
PDLIM7-209ENST00000503346 GIMAP6Q6P9H5 292 aa21.89■■□□□ 1.09
PDLIM7-209ENST00000503346 CENPQQ7L2Z9 268 aaPredicted RBP21.89■■□□□ 1.09
PDLIM7-209ENST00000503346 IFNL1Q8IU54 200 aa21.89■■□□□ 1.09
PDLIM7-209ENST00000503346 DDRGK1Q96HY6 314 aa21.89■■□□□ 1.09
PDLIM7-209ENST00000503346 SEC62Q99442 399 aaKnown RBP21.89■■□□□ 1.09
PDLIM7-209ENST00000503346 TAOK2Q9UL54 1235 aa21.89■■□□□ 1.09
PDLIM7-209ENST00000503346 IGF2BP3O00425 579 aaKnown RBP eCLIP21.88■■□□□ 1.09
PDLIM7-209ENST00000503346 TRPA1O75762 1119 aa21.88■■□□□ 1.09
PDLIM7-209ENST00000503346 ALDH1A1P00352 501 aa21.88■■□□□ 1.09
PDLIM7-209ENST00000503346 TATDN1Q6P1N9 297 aa21.88■■□□□ 1.09
PDLIM7-209ENST00000503346 BRI3BPQ8WY22 251 aa21.88■■□□□ 1.09
PDLIM7-209ENST00000503346 RILPL2Q969X0 211 aa21.88■■□□□ 1.09
PDLIM7-209ENST00000503346 PTPN18Q99952 460 aa21.88■■□□□ 1.09
PDLIM7-209ENST00000503346 GINM1Q9NU53 330 aa21.88■■□□□ 1.09
PDLIM7-209ENST00000503346 ZHX2Q9Y6X8 837 aa21.88■■□□□ 1.09
PDLIM7-209ENST00000503346 CCL15-CCL14A0A0B4J2E2 113 aa21.87■■□□□ 1.09
PDLIM7-209ENST00000503346 GSG1L2A8MUP6 293 aa21.87■■□□□ 1.09
PDLIM7-209ENST00000503346 CXCL11O14625 94 aa21.87■■□□□ 1.09
PDLIM7-209ENST00000503346 CYP2D6P10635 497 aa21.87■■□□□ 1.09
PDLIM7-209ENST00000503346 CETPP11597 493 aa21.87■■□□□ 1.09
PDLIM7-209ENST00000503346 LBX1P52954 281 aa21.87■■□□□ 1.09
PDLIM7-209ENST00000503346 CCL15Q16663 113 aa21.87■■□□□ 1.09
PDLIM7-209ENST00000503346 CFHR5Q9BXR6 569 aa21.87■■□□□ 1.09
PDLIM7-209ENST00000503346 PRDM10Q9NQV6 1147 aa21.87■■□□□ 1.09
PDLIM7-209ENST00000503346 TSKSQ9UJT2 592 aa21.87■■□□□ 1.09
PDLIM7-209ENST00000503346 AFG3L2Q9Y4W6 797 aa21.87■■□□□ 1.09
PDLIM7-209ENST00000503346 LAMB1P07942 1786 aa21.87■■□□□ 1.09
PDLIM7-209ENST00000503346 USP17L12C9JPN9 530 aa21.86■■□□□ 1.09
PDLIM7-209ENST00000503346 USP17L21D6R901 530 aa21.86■■□□□ 1.09
PDLIM7-209ENST00000503346 EVX2Q03828 476 aa21.86■■□□□ 1.09
PDLIM7-209ENST00000503346 C12orf60Q5U649 245 aa21.86■■□□□ 1.09
PDLIM7-209ENST00000503346 OTUD7BQ6GQQ9 843 aa21.86■■□□□ 1.09
PDLIM7-209ENST00000503346 AMOTL1Q8IY63 956 aa21.86■■□□□ 1.09
PDLIM7-209ENST00000503346 TBC1D2Q9BYX2 928 aa21.86■■□□□ 1.09
PDLIM7-209ENST00000503346 HELLSQ9NRZ9 838 aa21.86■■□□□ 1.09
PDLIM7-209ENST00000503346 NAV1Q8NEY1 1877 aa21.86■■□□□ 1.09
PDLIM7-209ENST00000503346 PATL2C9JE40 543 aaKnown RBP21.85■■□□□ 1.09
PDLIM7-209ENST00000503346 ASNSP08243 561 aa21.85■■□□□ 1.09
PDLIM7-209ENST00000503346 SHMT1P34896 483 aa21.85■■□□□ 1.09
PDLIM7-209ENST00000503346 JAG1P78504 1218 aa21.85■■□□□ 1.09
PDLIM7-209ENST00000503346 SBK1Q52WX2 424 aa21.85■■□□□ 1.09
PDLIM7-209ENST00000503346 TTC22Q5TAA0 569 aa21.85■■□□□ 1.09
PDLIM7-209ENST00000503346 CTR9Q6PD62 1173 aa21.85■■□□□ 1.09
PDLIM7-209ENST00000503346 EPB41L4AQ9HCS5 686 aaPredicted RBP21.85■■□□□ 1.09
PDLIM7-209ENST00000503346 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.85■■□□□ 1.09
PDLIM7-209ENST00000503346 ARPP21Q9UBL0 812 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms