RNA–Protein interactions for RNA: ENST00000502724.5

PRDM2-211, Transcript of PR/SET domain 2, humanhuman

TSL 4

Gene PRDM2, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-211ENST00000502724 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.19□□□□□ -0.46
PRDM2-211ENST00000502724 SLC10A4Q96EP9 437 aa12.19□□□□□ -0.46
PRDM2-211ENST00000502724 WRNIP1Q96S55 665 aa12.19□□□□□ -0.46
PRDM2-211ENST00000502724 TBC1D2Q9BYX2 928 aa12.19□□□□□ -0.46
PRDM2-211ENST00000502724 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.19□□□□□ -0.46
PRDM2-211ENST00000502724 SWAP70Q9UH65 585 aa12.19□□□□□ -0.46
PRDM2-211ENST00000502724 MKRN1Q9UHC7 482 aaKnown RBP12.19□□□□□ -0.46
PRDM2-211ENST00000502724 ZNF112Q9UJU3 913 aa12.19□□□□□ -0.46
PRDM2-211ENST00000502724 DDX60LQ5H9U9 1706 aaKnown RBP12.19□□□□□ -0.46
PRDM2-211ENST00000502724 UBE2Q2LH0YL09 131 aa12.18□□□□□ -0.46
PRDM2-211ENST00000502724 CTNND1O60716 968 aaKnown RBP12.18□□□□□ -0.46
PRDM2-211ENST00000502724 APPP05067 770 aa12.18□□□□□ -0.46
PRDM2-211ENST00000502724 SLC3A2P08195 630 aaKnown RBP12.18□□□□□ -0.46
PRDM2-211ENST00000502724 ZBTB48P10074 688 aaPredicted RBP12.18□□□□□ -0.46
PRDM2-211ENST00000502724 GSPT1P15170 499 aaKnown RBP12.18□□□□□ -0.46
PRDM2-211ENST00000502724 NOL9Q5SY16 702 aaKnown RBP12.18□□□□□ -0.46
PRDM2-211ENST00000502724 MIGA2Q7L4E1 593 aa12.18□□□□□ -0.46
PRDM2-211ENST00000502724 SH3BP5LQ7L8J4 393 aa12.18□□□□□ -0.46
PRDM2-211ENST00000502724 ZFPM1Q8IX07 1006 aa12.18□□□□□ -0.46
PRDM2-211ENST00000502724 SDR42E1Q8WUS8 393 aa12.18□□□□□ -0.46
PRDM2-211ENST00000502724 CAPNS2Q96L46 248 aa12.18□□□□□ -0.46
PRDM2-211ENST00000502724 PALD1Q9ULE6 856 aa12.18□□□□□ -0.46
PRDM2-211ENST00000502724 ZMYM6O95789 1325 aa12.17□□□□□ -0.46
PRDM2-211ENST00000502724 CCDC171Q6TFL3 1326 aa12.17□□□□□ -0.46
PRDM2-211ENST00000502724 WDR33Q9C0J8 1336 aaKnown RBP12.17□□□□□ -0.46
PRDM2-211ENST00000502724 M0R2C6 588 aa12.17□□□□□ -0.46
PRDM2-211ENST00000502724 SLC10A3P09131 477 aa12.17□□□□□ -0.46
PRDM2-211ENST00000502724 TDO2P48775 406 aa12.17□□□□□ -0.46
PRDM2-211ENST00000502724 INHBEP58166 350 aa12.17□□□□□ -0.46
PRDM2-211ENST00000502724 SBK1Q52WX2 424 aa12.17□□□□□ -0.46
PRDM2-211ENST00000502724 ERO1BQ86YB8 467 aa12.17□□□□□ -0.46
PRDM2-211ENST00000502724 NAPBQ9H115 298 aa12.17□□□□□ -0.46
PRDM2-211ENST00000502724 PICK1Q9NRD5 415 aa12.17□□□□□ -0.46
PRDM2-211ENST00000502724 SAP30BPQ9UHR5 308 aaKnown RBP12.17□□□□□ -0.46
PRDM2-211ENST00000502724 OTOFQ9HC10 1997 aa12.17□□□□□ -0.46
PRDM2-211ENST00000502724 LAMB1P07942 1786 aa12.17□□□□□ -0.46
PRDM2-211ENST00000502724 BAZ2AQ9UIF9 1905 aaKnown RBP12.16□□□□□ -0.46
PRDM2-211ENST00000502724 GSG1L2A8MUP6 293 aa12.16□□□□□ -0.46
PRDM2-211ENST00000502724 ASNSP08243 561 aa12.16□□□□□ -0.46
PRDM2-211ENST00000502724 NT5C2P49902 561 aa12.16□□□□□ -0.46
PRDM2-211ENST00000502724 PPATQ06203 517 aa12.16□□□□□ -0.46
PRDM2-211ENST00000502724 SREBF2Q12772 1141 aa12.16□□□□□ -0.46
PRDM2-211ENST00000502724 NMIQ13287 307 aaPredicted RBP12.16□□□□□ -0.46
PRDM2-211ENST00000502724 VGLL4Q14135 290 aa12.16□□□□□ -0.46
PRDM2-211ENST00000502724 RASAL3Q86YV0 1011 aa12.16□□□□□ -0.46
PRDM2-211ENST00000502724 CDAN1Q8IWY9 1227 aa12.16□□□□□ -0.46
PRDM2-211ENST00000502724 SCYL3Q8IZE3 742 aa12.16□□□□□ -0.46
PRDM2-211ENST00000502724 U3KPZ7 1027 aaPredicted RBP12.16□□□□□ -0.46
PRDM2-211ENST00000502724 DOCK1Q14185 1865 aa12.16□□□□□ -0.46
PRDM2-211ENST00000502724 MYH8P13535 1937 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 THSD7BQ9C0I4 1608 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 A0A0D9SFI3 127 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 MANSC4A6NHS7 340 aaPredicted RBP12.15□□□□□ -0.46
PRDM2-211ENST00000502724 SPDYE5A6NIY4 337 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 PHF20L1A8MW92 1017 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 USP17L12C9JPN9 530 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 USP17L21D6R901 530 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 PRKAB2O43741 272 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 VEGFBP49765 207 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 HTRA3P83110 453 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 MAP2K1Q02750 393 aaPredicted RBP12.15□□□□□ -0.46
PRDM2-211ENST00000502724 ALX1Q15699 326 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 SLFNL1Q499Z3 407 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 C12orf60Q5U649 245 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 CYP4F22Q6NT55 531 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 TATDN1Q6P1N9 297 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 CWC27Q6UX04 472 aaKnown RBP12.15□□□□□ -0.46
PRDM2-211ENST00000502724 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.15□□□□□ -0.46
PRDM2-211ENST00000502724 MOB2Q70IA6 237 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 IFNL3Q8IZI9 196 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 DNAJC5GQ8N7S2 189 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 CCDC17Q96LX7 622 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 FAM227BQ96M60 508 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 AS3MTQ9HBK9 375 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 CABP5Q9NP86 173 aa12.15□□□□□ -0.46
PRDM2-211ENST00000502724 SIPA1L1O43166 1804 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 EIF5BO60841 1220 aaKnown RBP12.14□□□□□ -0.47
PRDM2-211ENST00000502724 CHGBP05060 677 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 CHMLP26374 656 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 CAP2P40123 477 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 GTF2A2P52657 109 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 PDE4BQ07343 736 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 GRM1Q13255 1194 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 PPIL2Q13356 520 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 SPRYD7Q5W111 196 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 OTUD7BQ6GQQ9 843 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 CTR9Q6PD62 1173 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 OPTNQ96CV9 577 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 WNK4Q96J92 1243 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 SEC62Q99442 399 aaKnown RBP12.14□□□□□ -0.47
PRDM2-211ENST00000502724 BEGAINQ9BUH8 593 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 DSCC1Q9BVC3 393 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 ELP3Q9H9T3 547 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 CTNNA3Q9UI47 895 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 ROBO3Q96MS0 1386 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 ATAD5Q96QE3 1844 aa12.14□□□□□ -0.47
PRDM2-211ENST00000502724 FAM155AB1AL88 458 aaPredicted RBP12.13□□□□□ -0.47
PRDM2-211ENST00000502724 CA12O43570 354 aa12.13□□□□□ -0.47
PRDM2-211ENST00000502724 ALDH1A1P00352 501 aa12.13□□□□□ -0.47
PRDM2-211ENST00000502724 HSPD1P10809 573 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms