RNA–Protein interactions for RNA: ENST00000502588.5

TNFRSF25-216, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-216ENST00000502588 IDH1O75874 414 aaKnown RBP27.78■■■□□ 2.04
TNFRSF25-216ENST00000502588 PPP4CP60510 307 aa27.78■■■□□ 2.04
TNFRSF25-216ENST00000502588 TGFBRAP1Q8WUH2 860 aa27.78■■■□□ 2.04
TNFRSF25-216ENST00000502588 CPA4Q9UI42 421 aa27.78■■■□□ 2.04
TNFRSF25-216ENST00000502588 FLT1P17948 1338 aa27.77■■■□□ 2.04
TNFRSF25-216ENST00000502588 CXCL11O14625 94 aa27.77■■■□□ 2.04
TNFRSF25-216ENST00000502588 CYP7A1P22680 504 aa27.77■■■□□ 2.04
TNFRSF25-216ENST00000502588 DDX60LQ5H9U9 1706 aaKnown RBP27.76■■■□□ 2.03
TNFRSF25-216ENST00000502588 A0A0G2JLL6 359 aaPredicted RBP27.76■■■□□ 2.03
TNFRSF25-216ENST00000502588 BAG3O95817 575 aa27.76■■■□□ 2.03
TNFRSF25-216ENST00000502588 CTGFP29279 349 aa27.76■■■□□ 2.03
TNFRSF25-216ENST00000502588 HSP90AB4PQ58FF6 505 aa27.76■■■□□ 2.03
TNFRSF25-216ENST00000502588 C17orf99Q6UX52 265 aa27.76■■■□□ 2.03
TNFRSF25-216ENST00000502588 PRRT2Q7Z6L0 340 aaPredicted RBP27.76■■■□□ 2.03
TNFRSF25-216ENST00000502588 MIGA1Q8NAN2 632 aa27.76■■■□□ 2.03
TNFRSF25-216ENST00000502588 NAV1Q8NEY1 1877 aa27.75■■■□□ 2.03
TNFRSF25-216ENST00000502588 TRIM75PA6NK02 468 aa27.75■■■□□ 2.03
TNFRSF25-216ENST00000502588 CYP2C8P10632 490 aa27.75■■■□□ 2.03
TNFRSF25-216ENST00000502588 LACTBP83111 547 aaPredicted RBP27.75■■■□□ 2.03
TNFRSF25-216ENST00000502588 MAGEB6Q8N7X4 407 aa27.75■■■□□ 2.03
TNFRSF25-216ENST00000502588 SLC4A8Q2Y0W8 1093 aa27.74■■■□□ 2.03
TNFRSF25-216ENST00000502588 GADL1Q6ZQY3 521 aa27.74■■■□□ 2.03
TNFRSF25-216ENST00000502588 KIF1BPQ96EK5 621 aa27.74■■■□□ 2.03
TNFRSF25-216ENST00000502588 DNAJC18Q9H819 358 aa27.74■■■□□ 2.03
TNFRSF25-216ENST00000502588 SAP30BPQ9UHR5 308 aaKnown RBP27.74■■■□□ 2.03
TNFRSF25-216ENST00000502588 PTCH2Q9Y6C5 1203 aa27.74■■■□□ 2.03
TNFRSF25-216ENST00000502588 HMMRO75330 724 aa27.73■■■□□ 2.03
TNFRSF25-216ENST00000502588 PLCG2P16885 1265 aa27.73■■■□□ 2.03
TNFRSF25-216ENST00000502588 SHROOM1Q2M3G4 852 aaPredicted RBP27.73■■■□□ 2.03
TNFRSF25-216ENST00000502588 PALD1Q9ULE6 856 aa27.73■■■□□ 2.03
TNFRSF25-216ENST00000502588 MYH7P12883 1935 aa27.73■■■□□ 2.03
TNFRSF25-216ENST00000502588 JAG1P78504 1218 aa27.72■■■□□ 2.03
TNFRSF25-216ENST00000502588 PDE3AQ14432 1141 aa27.72■■■□□ 2.03
TNFRSF25-216ENST00000502588 CLASRPQ8N2M8 674 aaKnown RBP27.72■■■□□ 2.03
TNFRSF25-216ENST00000502588 CAP2P40123 477 aa27.71■■■□□ 2.03
TNFRSF25-216ENST00000502588 EDC3Q96F86 508 aaKnown RBP27.71■■■□□ 2.03
TNFRSF25-216ENST00000502588 PI4KBQ9UBF8 816 aa27.71■■■□□ 2.03
TNFRSF25-216ENST00000502588 POTEFA5A3E0 1075 aa27.7■■■□□ 2.02
TNFRSF25-216ENST00000502588 HERC5Q9UII4 1024 aaKnown RBP27.7■■■□□ 2.02
TNFRSF25-216ENST00000502588 ARMC5Q96C12 935 aa27.69■■■□□ 2.02
TNFRSF25-216ENST00000502588 PARK7Q99497 189 aaKnown RBP27.69■■■□□ 2.02
TNFRSF25-216ENST00000502588 DHX36Q9H2U1 1008 aaKnown RBP27.69■■■□□ 2.02
TNFRSF25-216ENST00000502588 IFIT2P09913 472 aaKnown RBP27.68■■■□□ 2.02
TNFRSF25-216ENST00000502588 SPP2Q13103 211 aa27.68■■■□□ 2.02
TNFRSF25-216ENST00000502588 TREML2Q5T2D2 321 aa27.68■■■□□ 2.02
TNFRSF25-216ENST00000502588 FASTKD5Q7L8L6 764 aaKnown RBP27.68■■■□□ 2.02
TNFRSF25-216ENST00000502588 TRIM47Q96LD4 638 aa27.68■■■□□ 2.02
TNFRSF25-216ENST00000502588 DNAJC2Q99543 621 aaKnown RBP27.68■■■□□ 2.02
TNFRSF25-216ENST00000502588 KIAA0100Q14667 2235 aaKnown RBP27.67■■■□□ 2.02
TNFRSF25-216ENST00000502588 GOLIM4O00461 696 aa27.67■■■□□ 2.02
TNFRSF25-216ENST00000502588 IGSF3O75054 1194 aa27.67■■■□□ 2.02
TNFRSF25-216ENST00000502588 RAB11FIP3O75154 756 aa27.67■■■□□ 2.02
TNFRSF25-216ENST00000502588 BCRP11274 1271 aa27.67■■■□□ 2.02
TNFRSF25-216ENST00000502588 MAP3K12Q12852 859 aa27.67■■■□□ 2.02
TNFRSF25-216ENST00000502588 PDE4DIPQ5VU43 2346 aa27.67■■■□□ 2.02
TNFRSF25-216ENST00000502588 BRCA2P51587 3418 aa27.66■■■□□ 2.02
TNFRSF25-216ENST00000502588 SMARCA5O60264 1052 aaPredicted RBP27.66■■■□□ 2.02
TNFRSF25-216ENST00000502588 PSMC4P43686 418 aa27.66■■■□□ 2.02
TNFRSF25-216ENST00000502588 KIF22Q14807 665 aa27.66■■■□□ 2.02
TNFRSF25-216ENST00000502588 METTL16Q86W50 562 aaKnown RBP27.66■■■□□ 2.02
TNFRSF25-216ENST00000502588 RIOK1Q9BRS2 568 aaKnown RBP27.66■■■□□ 2.02
TNFRSF25-216ENST00000502588 CHMP4BQ9H444 224 aaKnown RBP27.66■■■□□ 2.02
TNFRSF25-216ENST00000502588 GDF11O95390 407 aa27.65■■■□□ 2.02
TNFRSF25-216ENST00000502588 PDE6AP16499 860 aa27.65■■■□□ 2.02
TNFRSF25-216ENST00000502588 SLFNL1Q499Z3 407 aa27.65■■■□□ 2.02
TNFRSF25-216ENST00000502588 ZNF280CQ8ND82 737 aa27.65■■■□□ 2.02
TNFRSF25-216ENST00000502588 SH3TC2Q8TF17 1288 aa27.65■■■□□ 2.02
TNFRSF25-216ENST00000502588 AGTPBP1Q9UPW5 1226 aa27.65■■■□□ 2.02
TNFRSF25-216ENST00000502588 DOCK3Q8IZD9 2030 aa27.64■■■□□ 2.02
TNFRSF25-216ENST00000502588 HMGCS2P54868 508 aa27.64■■■□□ 2.02
TNFRSF25-216ENST00000502588 ARHGEF6Q15052 776 aa27.64■■■□□ 2.02
TNFRSF25-216ENST00000502588 CRACR2BQ8N4Y2 399 aaPredicted RBP27.64■■■□□ 2.02
TNFRSF25-216ENST00000502588 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.64■■■□□ 2.02
TNFRSF25-216ENST00000502588 ZNF333Q96JL9 665 aa27.64■■■□□ 2.02
TNFRSF25-216ENST00000502588 BAZ2AQ9UIF9 1905 aaKnown RBP27.64■■■□□ 2.02
TNFRSF25-216ENST00000502588 USP17L5A8MUK1 530 aa27.63■■■□□ 2.01
TNFRSF25-216ENST00000502588 MYCP01106 439 aaPredicted RBP27.63■■■□□ 2.01
TNFRSF25-216ENST00000502588 OSBPP22059 807 aa27.63■■■□□ 2.01
TNFRSF25-216ENST00000502588 USP5P45974 858 aa27.63■■■□□ 2.01
TNFRSF25-216ENST00000502588 SLC9C1Q4G0N8 1177 aa27.63■■■□□ 2.01
TNFRSF25-216ENST00000502588 SLC9C2Q5TAH2 1124 aa27.63■■■□□ 2.01
TNFRSF25-216ENST00000502588 BOLA2Q9H3K6 86 aa27.63■■■□□ 2.01
TNFRSF25-216ENST00000502588 SLC45A1Q9Y2W3 748 aa27.63■■■□□ 2.01
TNFRSF25-216ENST00000502588 TCRBV5S4A2TA0A5A2 114 aa27.62■■■□□ 2.01
TNFRSF25-216ENST00000502588 CHGBP05060 677 aa27.62■■■□□ 2.01
TNFRSF25-216ENST00000502588 EVX2Q03828 476 aa27.62■■■□□ 2.01
TNFRSF25-216ENST00000502588 TTF1Q15361 905 aaPredicted RBP27.62■■■□□ 2.01
TNFRSF25-216ENST00000502588 FOXP4Q8IVH2 680 aaPredicted RBP27.62■■■□□ 2.01
TNFRSF25-216ENST00000502588 ZNF532Q9HCE3 1301 aa27.62■■■□□ 2.01
TNFRSF25-216ENST00000502588 MYH8P13535 1937 aa27.61■■■□□ 2.01
TNFRSF25-216ENST00000502588 FMNL1O95466 1100 aaPredicted RBP27.61■■■□□ 2.01
TNFRSF25-216ENST00000502588 SRRDQ9UH36 339 aa27.61■■■□□ 2.01
TNFRSF25-216ENST00000502588 MAGEB6P1A0A0J9YX57 407 aa27.6■■■□□ 2.01
TNFRSF25-216ENST00000502588 HLA-DOAP06340 250 aa27.6■■■□□ 2.01
TNFRSF25-216ENST00000502588 MTMR2Q13614 643 aa27.6■■■□□ 2.01
TNFRSF25-216ENST00000502588 PROCA1Q8NCQ7 364 aaPredicted RBP27.6■■■□□ 2.01
TNFRSF25-216ENST00000502588 TRIM34Q9BYJ4 488 aa27.6■■■□□ 2.01
TNFRSF25-216ENST00000502588 ZBTB21Q9ULJ3 1066 aa27.6■■■□□ 2.01
TNFRSF25-216ENST00000502588 ATP5JP18859 108 aa27.59■■■□□ 2.01
TNFRSF25-216ENST00000502588 EN2P19622 333 aaPredicted RBP27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms