RNA–Protein interactions for RNA: ENST00000498219.5

HPS1-214, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-214ENST00000498219 PTPN18Q99952 460 aa17.8■□□□□ 0.44
HPS1-214ENST00000498219 R3HDMLQ9H3Y0 253 aa17.8■□□□□ 0.44
HPS1-214ENST00000498219 ARMT1Q9H993 441 aa17.8■□□□□ 0.44
HPS1-214ENST00000498219 SAGE1Q9NXZ1 904 aa17.8■□□□□ 0.44
HPS1-214ENST00000498219 PHIPQ8WWQ0 1821 aa17.79■□□□□ 0.44
HPS1-214ENST00000498219 TTC41PQ6P2S7 1318 aa17.79■□□□□ 0.44
HPS1-214ENST00000498219 CCL15-CCL14A0A0B4J2E2 113 aa17.79■□□□□ 0.44
HPS1-214ENST00000498219 IRF6O14896 467 aa17.79■□□□□ 0.44
HPS1-214ENST00000498219 RRP1BQ14684 758 aaKnown RBP17.79■□□□□ 0.44
HPS1-214ENST00000498219 CCL15Q16663 113 aa17.79■□□□□ 0.44
HPS1-214ENST00000498219 NOL9Q5SY16 702 aaKnown RBP17.79■□□□□ 0.44
HPS1-214ENST00000498219 BRI3BPQ8WY22 251 aa17.79■□□□□ 0.44
HPS1-214ENST00000498219 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.79■□□□□ 0.446e-7■■■□□ 17.8
HPS1-214ENST00000498219 DDX60LQ5H9U9 1706 aaKnown RBP17.78■□□□□ 0.44
HPS1-214ENST00000498219 PRKAB2O43741 272 aa17.78■□□□□ 0.44
HPS1-214ENST00000498219 MBD4O95243 580 aa17.78■□□□□ 0.44
HPS1-214ENST00000498219 PDE4AP27815 886 aa17.78■□□□□ 0.44
HPS1-214ENST00000498219 PDE1AP54750 535 aa17.78■□□□□ 0.44
HPS1-214ENST00000498219 PPIL2Q13356 520 aa17.78■□□□□ 0.44
HPS1-214ENST00000498219 SCYL3Q8IZE3 742 aa17.78■□□□□ 0.44
HPS1-214ENST00000498219 SDR42E1Q8WUS8 393 aa17.78■□□□□ 0.44
HPS1-214ENST00000498219 TBC1D12O60347 775 aa17.77■□□□□ 0.44
HPS1-214ENST00000498219 GTF2A2P52657 109 aa17.77■□□□□ 0.44
HPS1-214ENST00000498219 EVX2Q03828 476 aa17.77■□□□□ 0.44
HPS1-214ENST00000498219 PPATQ06203 517 aa17.77■□□□□ 0.44
HPS1-214ENST00000498219 TMED8Q6PL24 325 aaPredicted RBP17.77■□□□□ 0.44
HPS1-214ENST00000498219 KBTBD3Q8NAB2 608 aa17.77■□□□□ 0.44
HPS1-214ENST00000498219 CCDC136Q96JN2 1154 aa17.77■□□□□ 0.44
HPS1-214ENST00000498219 PUS7LQ9H0K6 701 aaKnown RBP17.77■□□□□ 0.44
HPS1-214ENST00000498219 DHX36Q9H2U1 1008 aaKnown RBP17.77■□□□□ 0.44
HPS1-214ENST00000498219 DNAJC18Q9H819 358 aa17.77■□□□□ 0.44
HPS1-214ENST00000498219 PI4KBQ9UBF8 816 aa17.77■□□□□ 0.44
HPS1-214ENST00000498219 STAP2Q9UGK3 403 aa17.77■□□□□ 0.44
HPS1-214ENST00000498219 PTPRFP10586 1907 aa17.76■□□□□ 0.43
HPS1-214ENST00000498219 TESPA1A2RU30 521 aaPredicted RBP17.76■□□□□ 0.43
HPS1-214ENST00000498219 ERC2O15083 957 aa17.76■□□□□ 0.43
HPS1-214ENST00000498219 GLRX3O76003 335 aaKnown RBP17.76■□□□□ 0.43
HPS1-214ENST00000498219 INHBEP58166 350 aa17.76■□□□□ 0.43
HPS1-214ENST00000498219 UBE3CQ15386 1083 aa17.76■□□□□ 0.43
HPS1-214ENST00000498219 SHROOM1Q2M3G4 852 aaPredicted RBP17.76■□□□□ 0.43
HPS1-214ENST00000498219 SKAP1Q86WV1 359 aa17.76■□□□□ 0.43
HPS1-214ENST00000498219 CERS3Q8IU89 383 aa17.76■□□□□ 0.43
HPS1-214ENST00000498219 PLEKHM2Q8IWE5 1019 aa17.76■□□□□ 0.43
HPS1-214ENST00000498219 TNS4Q8IZW8 715 aa17.76■□□□□ 0.43
HPS1-214ENST00000498219 CRACR2BQ8N4Y2 399 aaPredicted RBP17.76■□□□□ 0.43
HPS1-214ENST00000498219 CRNKL1Q9BZJ0 848 aaKnown RBP17.76■□□□□ 0.43
HPS1-214ENST00000498219 PICK1Q9NRD5 415 aa17.76■□□□□ 0.43
HPS1-214ENST00000498219 CTNND1O60716 968 aaKnown RBP17.75■□□□□ 0.43
HPS1-214ENST00000498219 HLA-DOAP06340 250 aa17.75■□□□□ 0.43
HPS1-214ENST00000498219 CYP2D6P10635 497 aa17.75■□□□□ 0.43
HPS1-214ENST00000498219 PTPRAP18433 802 aa17.75■□□□□ 0.43
HPS1-214ENST00000498219 JAG1P78504 1218 aa17.75■□□□□ 0.43
HPS1-214ENST00000498219 SNAPC2Q13487 334 aa17.75■□□□□ 0.43
HPS1-214ENST00000498219 ZSCAN25Q6NSZ9 544 aa17.75■□□□□ 0.43
HPS1-214ENST00000498219 FAM43AQ8N2R8 423 aa17.75■□□□□ 0.43
HPS1-214ENST00000498219 TRIM34Q9BYJ4 488 aa17.75■□□□□ 0.43
HPS1-214ENST00000498219 HERC5Q9UII4 1024 aaKnown RBP17.75■□□□□ 0.43
HPS1-214ENST00000498219 ZHX2Q9Y6X8 837 aa17.75■□□□□ 0.43
HPS1-214ENST00000498219 RNF113AO15541 343 aaKnown RBP17.74■□□□□ 0.43
HPS1-214ENST00000498219 GDF11O95390 407 aa17.74■□□□□ 0.43
HPS1-214ENST00000498219 CETPP11597 493 aa17.74■□□□□ 0.43
HPS1-214ENST00000498219 PLCD1P51178 756 aa17.74■□□□□ 0.43
HPS1-214ENST00000498219 CENPQQ7L2Z9 268 aaPredicted RBP17.74■□□□□ 0.43
HPS1-214ENST00000498219 MCM9Q9NXL9 1143 aa17.74■□□□□ 0.43
HPS1-214ENST00000498219 BTBD19C9JJ37 291 aa17.73■□□□□ 0.43
HPS1-214ENST00000498219 ALDH1A1P00352 501 aa17.73■□□□□ 0.43
HPS1-214ENST00000498219 POLR3DP05423 398 aaPredicted RBP17.73■□□□□ 0.43
HPS1-214ENST00000498219 CAP2P40123 477 aa17.73■□□□□ 0.43
HPS1-214ENST00000498219 CRHR2Q13324 411 aa17.73■□□□□ 0.43
HPS1-214ENST00000498219 OTUD7BQ6GQQ9 843 aa17.73■□□□□ 0.43
HPS1-214ENST00000498219 FOXP4Q8IVH2 680 aaPredicted RBP17.73■□□□□ 0.43
HPS1-214ENST00000498219 OSBP2Q969R2 916 aa17.73■□□□□ 0.43
HPS1-214ENST00000498219 FSD1Q9BTV5 496 aa17.73■□□□□ 0.43
HPS1-214ENST00000498219 DCP1AQ9NPI6 582 aaPredicted RBP17.73■□□□□ 0.43
HPS1-214ENST00000498219 KCNH4Q9UQ05 1017 aa17.73■□□□□ 0.43
HPS1-214ENST00000498219 MYH8P13535 1937 aa17.72■□□□□ 0.43
HPS1-214ENST00000498219 SMIM22K7EJ46 135 aa17.72■□□□□ 0.43
HPS1-214ENST00000498219 M0R2C6 588 aa17.72■□□□□ 0.43
HPS1-214ENST00000498219 GPR25O00155 361 aa17.72■□□□□ 0.43
HPS1-214ENST00000498219 METTL16Q86W50 562 aaKnown RBP17.72■□□□□ 0.43
HPS1-214ENST00000498219 ZNF296Q8WUU4 475 aaPredicted RBP17.72■□□□□ 0.43
HPS1-214ENST00000498219 AFG3L2Q9Y4W6 797 aa17.72■□□□□ 0.43
HPS1-214ENST00000498219 SLC4A4Q9Y6R1 1079 aa17.72■□□□□ 0.43
HPS1-214ENST00000498219 CYP2D7A0A087X1C5 515 aa17.71■□□□□ 0.43
HPS1-214ENST00000498219 TRIM75PA6NK02 468 aa17.71■□□□□ 0.43
HPS1-214ENST00000498219 MOGSQ13724 837 aa17.71■□□□□ 0.43
HPS1-214ENST00000498219 TAF1CQ15572 869 aaPredicted RBP17.71■□□□□ 0.43
HPS1-214ENST00000498219 TTC6Q86TZ1 520 aa17.71■□□□□ 0.43
HPS1-214ENST00000498219 APPBP2Q92624 585 aa17.71■□□□□ 0.43
HPS1-214ENST00000498219 SEC62Q99442 399 aaKnown RBP17.71■□□□□ 0.43
HPS1-214ENST00000498219 PPP4R2Q9NY27 417 aa17.71■□□□□ 0.43
HPS1-214ENST00000498219 DGKZQ13574 1117 aa17.7■□□□□ 0.42
HPS1-214ENST00000498219 GADL1Q6ZQY3 521 aa17.7■□□□□ 0.42
HPS1-214ENST00000498219 STRBPQ96SI9 672 aaKnown RBP17.7■□□□□ 0.42
HPS1-214ENST00000498219 CFHR5Q9BXR6 569 aa17.7■□□□□ 0.42
HPS1-214ENST00000498219 OSBPL3Q9H4L5 887 aa17.7■□□□□ 0.42
HPS1-214ENST00000498219 SERPINB13Q9UIV8 391 aa17.7■□□□□ 0.42
HPS1-214ENST00000498219 CXCL11O14625 94 aa17.69■□□□□ 0.42
HPS1-214ENST00000498219 ERICH6BQ5W0A0 696 aa17.69■□□□□ 0.42
HPS1-214ENST00000498219 SLC44A5Q8NCS7 719 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms