RNA–Protein interactions for RNA: ENST00000497873.1

PAXBP1-209, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-209ENST00000497873 ACRP10323 421 aa8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 MLECQ14165 292 aa8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 ARSHQ5FYA8 562 aa8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 UNC5AQ6ZN44 842 aa8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 ATG4CQ96DT6 458 aa8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 KRT82Q9NSB4 513 aa8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 GMIPQ9P107 970 aa8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 PCDHB10Q9UN67 800 aa8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 PTCH2Q9Y6C5 1203 aa8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 FSCN2O14926 492 aa8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 ST13P5Q8NFI4 369 aaPredicted RBP8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 CWC22Q9HCG8 908 aaKnown RBP8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 NSFL1CQ9UNZ2 370 aaKnown RBP8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 LTBP3Q9NS15 1303 aa8.6□□□□□ -1.03
PAXBP1-209ENST00000497873 MARCH6O60337 910 aa8.59□□□□□ -1.03
PAXBP1-209ENST00000497873 MAP2K3P46734 347 aa8.59□□□□□ -1.03
PAXBP1-209ENST00000497873 VHLLQ6RSH7 139 aa8.59□□□□□ -1.03
PAXBP1-209ENST00000497873 C12orf40Q86WS4 652 aa8.59□□□□□ -1.03
PAXBP1-209ENST00000497873 KLHDC7BQ96G42 594 aa8.59□□□□□ -1.03
PAXBP1-209ENST00000497873 FEZ1Q99689 392 aa8.59□□□□□ -1.03
PAXBP1-209ENST00000497873 KLHL3Q9UH77 587 aa8.59□□□□□ -1.03
PAXBP1-209ENST00000497873 PRAMEF27A3QJZ7 478 aa8.59□□□□□ -1.03
PAXBP1-209ENST00000497873 NME1P15531 152 aaKnown RBP8.59□□□□□ -1.03
PAXBP1-209ENST00000497873 JMYQ8N9B5 988 aa8.59□□□□□ -1.03
PAXBP1-209ENST00000497873 MBIPQ9NS73 344 aa8.59□□□□□ -1.03
PAXBP1-209ENST00000497873 ALBP02768 609 aa8.58□□□□□ -1.04
PAXBP1-209ENST00000497873 AFF1P51825 1210 aaKnown RBP8.58□□□□□ -1.04
PAXBP1-209ENST00000497873 C20orf204Q6ZNR8 217 aa8.58□□□□□ -1.04
PAXBP1-209ENST00000497873 NLRC3Q7RTR2 1065 aa8.58□□□□□ -1.04
PAXBP1-209ENST00000497873 GPR161Q8N6U8 529 aaKnown RBP8.58□□□□□ -1.04
PAXBP1-209ENST00000497873 WNT8BQ93098 351 aa8.58□□□□□ -1.04
PAXBP1-209ENST00000497873 SLC9A7Q96T83 725 aa8.58□□□□□ -1.04
PAXBP1-209ENST00000497873 OSGEPQ9NPF4 335 aa8.58□□□□□ -1.04
PAXBP1-209ENST00000497873 SLC12A7Q9Y666 1083 aa8.58□□□□□ -1.04
PAXBP1-209ENST00000497873 ASMTLO95671 621 aa8.57□□□□□ -1.04
PAXBP1-209ENST00000497873 C8orf86Q6ZUL3 223 aa8.57□□□□□ -1.04
PAXBP1-209ENST00000497873 EEPD1Q7L9B9 569 aa8.57□□□□□ -1.04
PAXBP1-209ENST00000497873 TAB3Q8N5C8 712 aaPredicted RBP8.57□□□□□ -1.04
PAXBP1-209ENST00000497873 USP26Q9BXU7 913 aa8.57□□□□□ -1.04
PAXBP1-209ENST00000497873 NLRP12P59046 1061 aa8.57□□□□□ -1.04
PAXBP1-209ENST00000497873 AMPD3Q01432 767 aa8.57□□□□□ -1.04
PAXBP1-209ENST00000497873 PDE4BQ07343 736 aa8.57□□□□□ -1.04
PAXBP1-209ENST00000497873 C21orf62-AS1Q17RA5 79 aa8.57□□□□□ -1.04
PAXBP1-209ENST00000497873 CYFIP1Q7L576 1253 aa8.57□□□□□ -1.04
PAXBP1-209ENST00000497873 MASP1P48740 699 aa8.56□□□□□ -1.04
PAXBP1-209ENST00000497873 INTS3Q68E01 1043 aaKnown RBP8.56□□□□□ -1.04
PAXBP1-209ENST00000497873 CHURC1-FNTBB4DL54 471 aa8.56□□□□□ -1.04
PAXBP1-209ENST00000497873 EIF4EBP3O60516 100 aaPredicted RBP8.56□□□□□ -1.04
PAXBP1-209ENST00000497873 PGRP06401 933 aa8.56□□□□□ -1.04
PAXBP1-209ENST00000497873 GRK4P32298 578 aa8.56□□□□□ -1.04
PAXBP1-209ENST00000497873 TCEA2Q15560 299 aa8.56□□□□□ -1.04
PAXBP1-209ENST00000497873 KIAA1211LQ6NV74 962 aa8.56□□□□□ -1.04
PAXBP1-209ENST00000497873 CNNM2Q9H8M5 875 aa8.56□□□□□ -1.04
PAXBP1-209ENST00000497873 KLHL42Q9P2K6 505 aa8.56□□□□□ -1.04
PAXBP1-209ENST00000497873 CD2APQ9Y5K6 639 aa8.56□□□□□ -1.04
PAXBP1-209ENST00000497873 IGF1RP08069 1367 aa8.55□□□□□ -1.04
PAXBP1-209ENST00000497873 LILRB5O75023 590 aa8.55□□□□□ -1.04
PAXBP1-209ENST00000497873 FAM153BP0C7A2 387 aa8.55□□□□□ -1.04
PAXBP1-209ENST00000497873 NCAPHQ15003 741 aa8.55□□□□□ -1.04
PAXBP1-209ENST00000497873 CDCP2Q5VXM1 449 aa8.55□□□□□ -1.04
PAXBP1-209ENST00000497873 WFDC8Q8IUA0 241 aa8.55□□□□□ -1.04
PAXBP1-209ENST00000497873 RPUSD2Q8IZ73 545 aaKnown RBP8.55□□□□□ -1.04
PAXBP1-209ENST00000497873 TAF7LQ5H9L4 462 aa8.55□□□□□ -1.04
PAXBP1-209ENST00000497873 TMEM201Q5SNT2 666 aa8.55□□□□□ -1.04
PAXBP1-209ENST00000497873 GOLGA6L1Q8N7Z2 621 aa8.55□□□□□ -1.04
PAXBP1-209ENST00000497873 PHAXQ9H814 394 aaKnown RBP8.55□□□□□ -1.04
PAXBP1-209ENST00000497873 TNFRSF10CO14798 259 aa8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 DDX3YO15523 660 aaKnown RBP8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 ETF1P62495 437 aaKnown RBP8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 KIF4BQ2VIQ3 1234 aa8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 SPATA9Q9BWV2 254 aa8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 TACC3Q9Y6A5 838 aa8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 M0R082 166 aa8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 HCLS1P14317 486 aaPredicted RBP8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 POLR2BP30876 1174 aaKnown RBP8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 GNPTABQ3T906 1256 aa8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 ZC3H12AQ5D1E8 599 aaKnown RBP8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 GALNT11Q8NCW6 608 aa8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 ZNF417Q8TAU3 575 aa8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 ZNF669Q96BR6 464 aaPredicted RBP8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 ACSF2Q96CM8 615 aaPredicted RBP8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 ZNF587Q96SQ5 575 aaPredicted RBP8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 HIF3AQ9Y2N7 669 aa8.54□□□□□ -1.04
PAXBP1-209ENST00000497873 SUSD5O60279 629 aa8.53□□□□□ -1.04
PAXBP1-209ENST00000497873 DLGAP3O95886 979 aa8.53□□□□□ -1.04
PAXBP1-209ENST00000497873 EPXP11678 715 aa8.53□□□□□ -1.04
PAXBP1-209ENST00000497873 SUZ12Q15022 739 aaKnown RBP8.53□□□□□ -1.04
PAXBP1-209ENST00000497873 SLC10A6Q3KNW5 377 aa8.53□□□□□ -1.04
PAXBP1-209ENST00000497873 DALRD3Q5D0E6 543 aaKnown RBP8.53□□□□□ -1.04
PAXBP1-209ENST00000497873 PPM1JQ5JR12 505 aa8.53□□□□□ -1.04
PAXBP1-209ENST00000497873 MSL1Q68DK7 614 aa8.53□□□□□ -1.04
PAXBP1-209ENST00000497873 SLCO4C1Q6ZQN7 724 aa8.53□□□□□ -1.04
PAXBP1-209ENST00000497873 ZSWIM2Q8NEG5 633 aa8.53□□□□□ -1.04
PAXBP1-209ENST00000497873 KLHL6Q8WZ60 621 aa8.53□□□□□ -1.04
PAXBP1-209ENST00000497873 METTL14Q9HCE5 456 aaKnown RBP8.53□□□□□ -1.04
PAXBP1-209ENST00000497873 LOC100289279A0A1B0GTE1 492 aa8.52□□□□□ -1.04
PAXBP1-209ENST00000497873 RAG1P15918 1043 aa8.52□□□□□ -1.04
PAXBP1-209ENST00000497873 HNRNPUQ00839 825 aaKnown RBP eCLIP8.52□□□□□ -1.04
PAXBP1-209ENST00000497873 SETDB1Q15047 1291 aa8.52□□□□□ -1.04
PAXBP1-209ENST00000497873 KLHL23Q8NBE8 558 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms