RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 CDK8P49336 464 aa10.91□□□□□ -0.66
GARNL3-221ENST00000497703 EIF6P56537 245 aaKnown RBP10.91□□□□□ -0.66
GARNL3-221ENST00000497703 PPM1JQ5JR12 505 aa10.91□□□□□ -0.66
GARNL3-221ENST00000497703 MCF2L2Q86YR7 1114 aa10.91□□□□□ -0.66
GARNL3-221ENST00000497703 RNF214Q8ND24 703 aa10.91□□□□□ -0.66
GARNL3-221ENST00000497703 FANCD2OSQ96PS1 177 aa10.91□□□□□ -0.66
GARNL3-221ENST00000497703 PPT2Q9UMR5 302 aa10.91□□□□□ -0.66
GARNL3-221ENST00000497703 HTR3BO95264 441 aa10.9□□□□□ -0.66
GARNL3-221ENST00000497703 PGRP06401 933 aa10.9□□□□□ -0.66
GARNL3-221ENST00000497703 ZNF507Q8TCN5 953 aa10.9□□□□□ -0.66
GARNL3-221ENST00000497703 HIRIP3Q9BW71 556 aaPredicted RBP10.9□□□□□ -0.66
GARNL3-221ENST00000497703 WNT10AQ9GZT5 417 aa10.9□□□□□ -0.66
GARNL3-221ENST00000497703 EHMT1Q9H9B1 1298 aa10.9□□□□□ -0.66
GARNL3-221ENST00000497703 POLR3KQ9Y2Y1 108 aaPredicted RBP10.9□□□□□ -0.66
GARNL3-221ENST00000497703 ATE1O95260 518 aa10.89□□□□□ -0.67
GARNL3-221ENST00000497703 GRK4P32298 578 aa10.89□□□□□ -0.67
GARNL3-221ENST00000497703 ADGRE1Q14246 886 aa10.89□□□□□ -0.67
GARNL3-221ENST00000497703 MBTPS1Q14703 1052 aa10.89□□□□□ -0.67
GARNL3-221ENST00000497703 UVSSAQ2YD98 709 aa10.89□□□□□ -0.67
GARNL3-221ENST00000497703 TXNRD3Q86VQ6 643 aa10.89□□□□□ -0.67
GARNL3-221ENST00000497703 OR6P1Q8NGX9 317 aa10.89□□□□□ -0.67
GARNL3-221ENST00000497703 DISC1Q9NRI5 854 aa10.89□□□□□ -0.67
GARNL3-221ENST00000497703 ADAM30Q9UKF2 790 aa10.89□□□□□ -0.67
GARNL3-221ENST00000497703 R3HCC1Q9Y3T6 440 aaKnown RBP10.89□□□□□ -0.67
GARNL3-221ENST00000497703 PRR36Q9H6K5 1346 aa10.88□□□□□ -0.67
GARNL3-221ENST00000497703 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.88□□□□□ -0.67
GARNL3-221ENST00000497703 NOS3P29474 1203 aa10.88□□□□□ -0.67
GARNL3-221ENST00000497703 CLCQ05315 142 aa10.88□□□□□ -0.67
GARNL3-221ENST00000497703 TTLL4Q14679 1199 aa10.88□□□□□ -0.67
GARNL3-221ENST00000497703 ZBTB37Q5TC79 503 aa10.88□□□□□ -0.67
GARNL3-221ENST00000497703 CCDC81Q6ZN84 652 aa10.88□□□□□ -0.67
GARNL3-221ENST00000497703 C2CD4AQ8NCU7 369 aaPredicted RBP10.88□□□□□ -0.67
GARNL3-221ENST00000497703 ANAPC16Q96DE5 110 aa10.88□□□□□ -0.67
GARNL3-221ENST00000497703 ZNRF3Q9ULT6 936 aa10.88□□□□□ -0.67
GARNL3-221ENST00000497703 ACTL7BQ9Y614 415 aa10.88□□□□□ -0.67
GARNL3-221ENST00000497703 PREPP48147 710 aa10.87□□□□□ -0.67
GARNL3-221ENST00000497703 YARSP54577 528 aaKnown RBP10.87□□□□□ -0.67
GARNL3-221ENST00000497703 RING1Q06587 406 aa10.87□□□□□ -0.67
GARNL3-221ENST00000497703 SOGA3Q5TF21 947 aa10.87□□□□□ -0.67
GARNL3-221ENST00000497703 Q6ZS46 218 aa10.87□□□□□ -0.67
GARNL3-221ENST00000497703 HID1Q8IV36 788 aa10.87□□□□□ -0.67
GARNL3-221ENST00000497703 CKAP2LQ8IYA6 745 aa10.87□□□□□ -0.67
GARNL3-221ENST00000497703 REV1Q9UBZ9 1251 aa10.87□□□□□ -0.67
GARNL3-221ENST00000497703 HCLS1P14317 486 aaPredicted RBP10.86□□□□□ -0.67
GARNL3-221ENST00000497703 RAB6AP20340 208 aa10.86□□□□□ -0.67
GARNL3-221ENST00000497703 TNNI3KQ59H18 835 aa10.86□□□□□ -0.67
GARNL3-221ENST00000497703 SMYD4Q8IYR2 804 aaPredicted RBP10.86□□□□□ -0.67
GARNL3-221ENST00000497703 DHX38Q92620 1227 aaKnown RBP10.86□□□□□ -0.67
GARNL3-221ENST00000497703 UTP4Q969X6 686 aaKnown RBP10.86□□□□□ -0.67
GARNL3-221ENST00000497703 CORINQ9Y5Q5 1042 aa10.86□□□□□ -0.67
GARNL3-221ENST00000497703 RXRBP28702 533 aa10.85□□□□□ -0.67
GARNL3-221ENST00000497703 GSX1Q9H4S2 264 aaPredicted RBP10.85□□□□□ -0.67
GARNL3-221ENST00000497703 FAM105AQ9NUU6 356 aa10.85□□□□□ -0.67
GARNL3-221ENST00000497703 GMIPQ9P107 970 aa10.85□□□□□ -0.67
GARNL3-221ENST00000497703 PCOLCE2Q9UKZ9 415 aa10.85□□□□□ -0.67
GARNL3-221ENST00000497703 MRVI1Q9Y6F6 885 aa10.85□□□□□ -0.67
GARNL3-221ENST00000497703 TMEM201Q5SNT2 666 aa10.84□□□□□ -0.67
GARNL3-221ENST00000497703 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.84□□□□□ -0.67
GARNL3-221ENST00000497703 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.84□□□□□ -0.67
GARNL3-221ENST00000497703 DCAF5Q96JK2 942 aa10.84□□□□□ -0.67
GARNL3-221ENST00000497703 KLHL3Q9UH77 587 aa10.84□□□□□ -0.67
GARNL3-221ENST00000497703 MAP7Q14244 749 aa10.83□□□□□ -0.68
GARNL3-221ENST00000497703 RBBP8NLQ8NC74 664 aaPredicted RBP10.83□□□□□ -0.68
GARNL3-221ENST00000497703 FAM46AQ96IP4 442 aaKnown RBP10.83□□□□□ -0.68
GARNL3-221ENST00000497703 UBL7Q96S82 380 aaPredicted RBP10.83□□□□□ -0.68
GARNL3-221ENST00000497703 KCNF1Q9H3M0 494 aa10.83□□□□□ -0.68
GARNL3-221ENST00000497703 DAGLAQ9Y4D2 1042 aa10.83□□□□□ -0.68
GARNL3-221ENST00000497703 DHX15O43143 795 aaKnown RBP10.82□□□□□ -0.68
GARNL3-221ENST00000497703 BMP3P12645 472 aa10.82□□□□□ -0.68
GARNL3-221ENST00000497703 GIPRP48546 466 aa10.82□□□□□ -0.68
GARNL3-221ENST00000497703 CHMP4BP1P59074 171 aa10.82□□□□□ -0.68
GARNL3-221ENST00000497703 SLC6A19Q695T7 634 aa10.82□□□□□ -0.68
GARNL3-221ENST00000497703 DZIP1LQ8IYY4 767 aaKnown RBP10.82□□□□□ -0.68
GARNL3-221ENST00000497703 FAM13CQ8NE31 585 aa10.82□□□□□ -0.68
GARNL3-221ENST00000497703 TMEM40Q8WWA1 233 aa10.82□□□□□ -0.68
GARNL3-221ENST00000497703 ISL2Q96A47 359 aa10.82□□□□□ -0.68
GARNL3-221ENST00000497703 MYRFLQ96LU7 910 aa10.82□□□□□ -0.68
GARNL3-221ENST00000497703 TM9SF2Q99805 663 aa10.82□□□□□ -0.68
GARNL3-221ENST00000497703 ZNF408Q9H9D4 720 aa10.82□□□□□ -0.68
GARNL3-221ENST00000497703 CCDC180Q9P1Z9 1646 aa10.81□□□□□ -0.68
GARNL3-221ENST00000497703 KRBA1A5PL33 1030 aa10.81□□□□□ -0.68
GARNL3-221ENST00000497703 IGSF3O75054 1194 aa10.81□□□□□ -0.68
GARNL3-221ENST00000497703 MCATQ8IVS2 390 aaKnown RBP10.81□□□□□ -0.68
GARNL3-221ENST00000497703 SHDQ96IW2 340 aa10.81□□□□□ -0.68
GARNL3-221ENST00000497703 TMEM87BQ96K49 555 aa10.81□□□□□ -0.68
GARNL3-221ENST00000497703 DNAJC2Q99543 621 aaKnown RBP10.81□□□□□ -0.68
GARNL3-221ENST00000497703 TRIM55Q9BYV6 548 aa10.81□□□□□ -0.68
GARNL3-221ENST00000497703 U2SURPO15042 1029 aaKnown RBP10.8□□□□□ -0.68
GARNL3-221ENST00000497703 NEFMP07197 916 aa10.8□□□□□ -0.68
GARNL3-221ENST00000497703 RAG1P15918 1043 aa10.8□□□□□ -0.68
GARNL3-221ENST00000497703 MRPL41Q8IXM3 137 aaKnown RBP10.8□□□□□ -0.68
GARNL3-221ENST00000497703 FBLIM1Q8WUP2 373 aa10.8□□□□□ -0.68
GARNL3-221ENST00000497703 ACSF2Q96CM8 615 aaPredicted RBP10.8□□□□□ -0.68
GARNL3-221ENST00000497703 ACSS3Q9H6R3 686 aa10.8□□□□□ -0.68
GARNL3-221ENST00000497703 PRKAG3Q9UGI9 489 aa10.8□□□□□ -0.68
GARNL3-221ENST00000497703 MEIS3P2A8K0S8 358 aa10.79□□□□□ -0.68
GARNL3-221ENST00000497703 C1QTNF9BB2RNN3 333 aa10.79□□□□□ -0.68
GARNL3-221ENST00000497703 MAP4P27816 1152 aaKnown RBP10.79□□□□□ -0.68
GARNL3-221ENST00000497703 ETFBP38117 255 aa10.79□□□□□ -0.68
GARNL3-221ENST00000497703 CHRNA4P43681 627 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms