RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.93□□□□□ -1.14
GGPS1-208ENST00000497327 ITGAEP38570 1179 aa7.93□□□□□ -1.14
GGPS1-208ENST00000497327 CYP27A1Q02318 531 aa7.93□□□□□ -1.14
GGPS1-208ENST00000497327 DUSP27Q5VZP5 1158 aa7.93□□□□□ -1.14
GGPS1-208ENST00000497327 CYB5RLQ6IPT4 315 aa7.93□□□□□ -1.14
GGPS1-208ENST00000497327 TMC7Q7Z402 723 aa7.93□□□□□ -1.14
GGPS1-208ENST00000497327 WFDC3Q8IUB2 231 aa7.93□□□□□ -1.14
GGPS1-208ENST00000497327 FBXL18Q96ME1 805 aa7.93□□□□□ -1.14
GGPS1-208ENST00000497327 TIMELESSQ9UNS1 1208 aa7.93□□□□□ -1.14
GGPS1-208ENST00000497327 DAGLAQ9Y4D2 1042 aa7.93□□□□□ -1.14
GGPS1-208ENST00000497327 ABCC5O15440 1437 aa7.93□□□□□ -1.14
GGPS1-208ENST00000497327 PLCH2O75038 1416 aa7.93□□□□□ -1.14
GGPS1-208ENST00000497327 OGFOD3Q6PK18 319 aa7.92□□□□□ -1.14
GGPS1-208ENST00000497327 PDZD3Q86UT5 571 aa7.92□□□□□ -1.14
GGPS1-208ENST00000497327 CCER1Q8TC90 406 aaPredicted RBP7.92□□□□□ -1.14
GGPS1-208ENST00000497327 FANCD2OSQ96PS1 177 aa7.92□□□□□ -1.14
GGPS1-208ENST00000497327 ZC3H12CQ9C0D7 883 aaKnown RBP7.92□□□□□ -1.14
GGPS1-208ENST00000497327 LGR6Q9HBX8 967 aa7.92□□□□□ -1.14
GGPS1-208ENST00000497327 LRRC4CQ9HCJ2 640 aa7.92□□□□□ -1.14
GGPS1-208ENST00000497327 PAK6Q9NQU5 681 aaPredicted RBP7.92□□□□□ -1.14
GGPS1-208ENST00000497327 GSTP1P09211 210 aaKnown RBP7.91□□□□□ -1.14
GGPS1-208ENST00000497327 KIF4BQ2VIQ3 1234 aa7.91□□□□□ -1.14
GGPS1-208ENST00000497327 KRT82Q9NSB4 513 aa7.91□□□□□ -1.14
GGPS1-208ENST00000497327 SETD5Q9C0A6 1442 aa7.91□□□□□ -1.14
GGPS1-208ENST00000497327 CAMSAP2Q08AD1 1489 aa7.91□□□□□ -1.14
GGPS1-208ENST00000497327 TTC37Q6PGP7 1564 aa7.91□□□□□ -1.14
GGPS1-208ENST00000497327 MBD5Q9P267 1494 aa7.9□□□□□ -1.14
GGPS1-208ENST00000497327 HFM1A2PYH4 1435 aa7.9□□□□□ -1.14
GGPS1-208ENST00000497327 DAPK1P53355 1430 aa7.9□□□□□ -1.14
GGPS1-208ENST00000497327 AKNAQ7Z591 1439 aa7.9□□□□□ -1.14
GGPS1-208ENST00000497327 ROCK1Q13464 1354 aa7.9□□□□□ -1.14
GGPS1-208ENST00000497327 FCGRTP55899 365 aa7.9□□□□□ -1.14
GGPS1-208ENST00000497327 ID3Q02535 119 aa7.9□□□□□ -1.14
GGPS1-208ENST00000497327 DSC3Q14574 896 aa7.9□□□□□ -1.14
GGPS1-208ENST00000497327 STK35Q8TDR2 534 aa7.9□□□□□ -1.14
GGPS1-208ENST00000497327 DISC1Q9NRI5 854 aa7.9□□□□□ -1.14
GGPS1-208ENST00000497327 GNEQ9Y223 722 aaKnown RBP7.9□□□□□ -1.14
GGPS1-208ENST00000497327 ITSN2Q9NZM3 1697 aa7.89□□□□□ -1.15
GGPS1-208ENST00000497327 ARAP3Q8WWN8 1544 aa7.89□□□□□ -1.15
GGPS1-208ENST00000497327 NAIPQ13075 1403 aa7.89□□□□□ -1.15
GGPS1-208ENST00000497327 KIAA1107Q9UPP5 1409 aa7.89□□□□□ -1.15
GGPS1-208ENST00000497327 RAB3GAP2Q9H2M9 1393 aa7.89□□□□□ -1.15
GGPS1-208ENST00000497327 DTHD1Q6ZMT9 781 aa7.89□□□□□ -1.15
GGPS1-208ENST00000497327 TP53INP2Q8IXH6 220 aa7.89□□□□□ -1.15
GGPS1-208ENST00000497327 FLCNQ8NFG4 579 aa7.89□□□□□ -1.15
GGPS1-208ENST00000497327 ATXN3LQ9H3M9 355 aa7.89□□□□□ -1.15
GGPS1-208ENST00000497327 CDC42BPAQ5VT25 1732 aa7.89□□□□□ -1.15
GGPS1-208ENST00000497327 MAPKBP1O60336 1514 aa7.88□□□□□ -1.15
GGPS1-208ENST00000497327 ITGB5P18084 799 aa7.88□□□□□ -1.15
GGPS1-208ENST00000497327 CDK5R2Q13319 367 aa7.88□□□□□ -1.15
GGPS1-208ENST00000497327 EFCAB2Q5VUJ9 269 aa7.88□□□□□ -1.15
GGPS1-208ENST00000497327 BCL7CQ8WUZ0 217 aaPredicted RBP7.88□□□□□ -1.15
GGPS1-208ENST00000497327 BCO2Q9BYV7 579 aa7.88□□□□□ -1.15
GGPS1-208ENST00000497327 U3KQE9 123 aa7.88□□□□□ -1.15
GGPS1-208ENST00000497327 DNMT1P26358 1616 aaKnown RBP7.88□□□□□ -1.15
GGPS1-208ENST00000497327 PREX2Q70Z35 1606 aa7.88□□□□□ -1.15
GGPS1-208ENST00000497327 DHX57Q6P158 1386 aaKnown RBP7.87□□□□□ -1.15
GGPS1-208ENST00000497327 SLFN14P0C7P3 912 aa7.87□□□□□ -1.15
GGPS1-208ENST00000497327 HNRNPMP52272 730 aaKnown RBP eCLIP7.87□□□□□ -1.15
GGPS1-208ENST00000497327 PDE4CQ08493 712 aa7.87□□□□□ -1.15
GGPS1-208ENST00000497327 TMEM39AQ9NV64 488 aa7.87□□□□□ -1.15
GGPS1-208ENST00000497327 GPN3Q9UHW5 284 aaPredicted RBP7.87□□□□□ -1.15
GGPS1-208ENST00000497327 DCTN4Q9UJW0 460 aa7.87□□□□□ -1.15
GGPS1-208ENST00000497327 ABCA9Q8IUA7 1624 aa7.87□□□□□ -1.15
GGPS1-208ENST00000497327 SAMD9LQ8IVG5 1584 aa7.87□□□□□ -1.15
GGPS1-208ENST00000497327 ARHGEF12Q9NZN5 1544 aa7.87□□□□□ -1.15
GGPS1-208ENST00000497327 ADGRL2O95490 1459 aa7.87□□□□□ -1.15
GGPS1-208ENST00000497327 NCOA1Q15788 1441 aa7.86□□□□□ -1.15
GGPS1-208ENST00000497327 CDC42BPBQ9Y5S2 1711 aa7.86□□□□□ -1.15
GGPS1-208ENST00000497327 NEFMP07197 916 aa7.86□□□□□ -1.15
GGPS1-208ENST00000497327 FAM87AP0C7U9 286 aa7.86□□□□□ -1.15
GGPS1-208ENST00000497327 XRCC5P13010 732 aaKnown RBP7.86□□□□□ -1.15
GGPS1-208ENST00000497327 TTLL4Q14679 1199 aa7.86□□□□□ -1.15
GGPS1-208ENST00000497327 ENOX2Q16206 610 aaKnown RBP7.86□□□□□ -1.15
GGPS1-208ENST00000497327 ZNF574Q6ZN55 896 aaPredicted RBP7.86□□□□□ -1.15
GGPS1-208ENST00000497327 SULF2Q8IWU5 870 aa7.86□□□□□ -1.15
GGPS1-208ENST00000497327 SMYD4Q8IYR2 804 aaPredicted RBP7.86□□□□□ -1.15
GGPS1-208ENST00000497327 C3orf58Q8NDZ4 430 aa7.86□□□□□ -1.15
GGPS1-208ENST00000497327 PIDD1Q9HB75 910 aa7.86□□□□□ -1.15
GGPS1-208ENST00000497327 NLRP2Q9NX02 1062 aa7.86□□□□□ -1.15
GGPS1-208ENST00000497327 ARHGAP5Q13017 1502 aa7.86□□□□□ -1.15
GGPS1-208ENST00000497327 PLEKHH2Q8IVE3 1493 aa7.86□□□□□ -1.15
GGPS1-208ENST00000497327 SHANK2Q9UPX8 1470 aa7.86□□□□□ -1.15
GGPS1-208ENST00000497327 ARHGEF5Q12774 1597 aa7.85□□□□□ -1.15
GGPS1-208ENST00000497327 PNMA6FA0A0J9YX94 578 aa7.85□□□□□ -1.15
GGPS1-208ENST00000497327 TREHO43280 583 aa7.85□□□□□ -1.15
GGPS1-208ENST00000497327 PPP2R3AQ06190 1150 aa7.85□□□□□ -1.15
GGPS1-208ENST00000497327 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.85□□□□□ -1.15
GGPS1-208ENST00000497327 CYP27C1Q4G0S4 372 aa7.85□□□□□ -1.15
GGPS1-208ENST00000497327 NXPE4Q6UWF7 544 aa7.85□□□□□ -1.15
GGPS1-208ENST00000497327 SPRED2Q7Z698 418 aa7.85□□□□□ -1.15
GGPS1-208ENST00000497327 AGBL5Q8NDL9 886 aa7.85□□□□□ -1.15
GGPS1-208ENST00000497327 KCNB2Q92953 911 aa7.85□□□□□ -1.15
GGPS1-208ENST00000497327 RRP7BPQ9NSQ0 103 aa7.85□□□□□ -1.15
GGPS1-208ENST00000497327 CACNA2D2Q9NY47 1150 aa7.85□□□□□ -1.15
GGPS1-208ENST00000497327 CCDC141Q6ZP82 1450 aa7.84□□□□□ -1.15
GGPS1-208ENST00000497327 BTBD11A6QL63 1104 aa7.84□□□□□ -1.15
GGPS1-208ENST00000497327 LEFTY1O75610 366 aa7.84□□□□□ -1.15
GGPS1-208ENST00000497327 HCLS1P14317 486 aaPredicted RBP7.84□□□□□ -1.15
GGPS1-208ENST00000497327 ZEB1P37275 1124 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms