RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 XAGE3Q8WTP9 111 aa8.25□□□□□ -1.09
HOXA9-206ENST00000497089 CRAMP1Q96RY5 1269 aa8.25□□□□□ -1.09
HOXA9-206ENST00000497089 ARHGEF10LQ9HCE6 1279 aa8.25□□□□□ -1.09
HOXA9-206ENST00000497089 CHPF2Q9P2E5 772 aa8.25□□□□□ -1.09
HOXA9-206ENST00000497089 LAS1LQ9Y4W2 734 aaKnown RBP8.25□□□□□ -1.09
HOXA9-206ENST00000497089 WDR90Q96KV7 1748 aa8.25□□□□□ -1.09
HOXA9-206ENST00000497089 TMEM229AB2RXF0 380 aa8.24□□□□□ -1.09
HOXA9-206ENST00000497089 STAU1O95793 577 aaKnown RBP8.24□□□□□ -1.09
HOXA9-206ENST00000497089 INHAP05111 366 aa8.24□□□□□ -1.09
HOXA9-206ENST00000497089 CDK11BP21127 795 aaKnown RBP8.24□□□□□ -1.09
HOXA9-206ENST00000497089 FGD1P98174 961 aa8.24□□□□□ -1.09
HOXA9-206ENST00000497089 FKBP4Q02790 459 aaKnown RBP eCLIP8.24□□□□□ -1.09
HOXA9-206ENST00000497089 FSTL1Q12841 308 aa8.24□□□□□ -1.09
HOXA9-206ENST00000497089 TRIM28Q13263 835 aaKnown RBP8.24□□□□□ -1.09
HOXA9-206ENST00000497089 CLN3Q13286 438 aa8.24□□□□□ -1.09
HOXA9-206ENST00000497089 NLRP10Q86W26 655 aa8.24□□□□□ -1.09
HOXA9-206ENST00000497089 RTKN2Q8IZC4 609 aa8.24□□□□□ -1.09
HOXA9-206ENST00000497089 C1orf216Q8TAB5 229 aa8.24□□□□□ -1.09
HOXA9-206ENST00000497089 INSM2Q96T92 566 aaPredicted RBP8.24□□□□□ -1.09
HOXA9-206ENST00000497089 UTP14AQ9BVJ6 771 aaKnown RBP8.24□□□□□ -1.09
HOXA9-206ENST00000497089 RAB6BQ9NRW1 208 aa8.24□□□□□ -1.09
HOXA9-206ENST00000497089 HYPKQ9NX55 129 aa8.24□□□□□ -1.09
HOXA9-206ENST00000497089 SERTAD1Q9UHV2 236 aa8.24□□□□□ -1.09
HOXA9-206ENST00000497089 IL16Q14005 1332 aa8.24□□□□□ -1.09
HOXA9-206ENST00000497089 LGR5O75473 907 aa8.23□□□□□ -1.09
HOXA9-206ENST00000497089 IL2RAP01589 272 aa8.23□□□□□ -1.09
HOXA9-206ENST00000497089 VEGFAP15692 232 aaPredicted RBP8.23□□□□□ -1.09
HOXA9-206ENST00000497089 BRD2P25440 801 aaKnown RBP8.23□□□□□ -1.09
HOXA9-206ENST00000497089 AIMP1Q12904 312 aaKnown RBP8.23□□□□□ -1.09
HOXA9-206ENST00000497089 FRAT1Q92837 279 aaPredicted RBP8.23□□□□□ -1.09
HOXA9-206ENST00000497089 PSMD1Q99460 953 aa8.23□□□□□ -1.09
HOXA9-206ENST00000497089 ISCA1Q9BUE6 129 aa8.23□□□□□ -1.09
HOXA9-206ENST00000497089 RRAGCQ9HB90 399 aa8.23□□□□□ -1.09
HOXA9-206ENST00000497089 ETNK1Q9HBU6 452 aa8.23□□□□□ -1.09
HOXA9-206ENST00000497089 SENP2Q9HC62 589 aa8.23□□□□□ -1.09
HOXA9-206ENST00000497089 CXXC1Q9P0U4 656 aaPredicted RBP8.23□□□□□ -1.09
HOXA9-206ENST00000497089 GMPR2Q9P2T1 348 aaKnown RBP8.23□□□□□ -1.09
HOXA9-206ENST00000497089 LAMB2P55268 1798 aa8.23□□□□□ -1.09
HOXA9-206ENST00000497089 MEN1O00255 615 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 CTSOP43234 321 aaPredicted RBP8.22□□□□□ -1.09
HOXA9-206ENST00000497089 AAMPQ13685 434 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 C8orf58Q8NAV2 365 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 RPGRQ92834 1020 aaKnown RBP8.22□□□□□ -1.09
HOXA9-206ENST00000497089 XAGE2Q96GT9 111 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 RBM17Q96I25 401 aaKnown RBP8.22□□□□□ -1.09
HOXA9-206ENST00000497089 NLRP3Q96P20 1036 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 ESYT1Q9BSJ8 1104 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 MRS2Q9HD23 443 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 HRH3Q9Y5N1 445 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 SCN4AP35499 1836 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 SH3TC1Q8TE82 1336 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 DDX60Q8IY21 1712 aaKnown RBP8.22□□□□□ -1.09
HOXA9-206ENST00000497089 POTECB2RU33 542 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 WEE1P30291 646 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 RBM10P98175 930 aaKnown RBP8.22□□□□□ -1.09
HOXA9-206ENST00000497089 NFKBIBQ15653 356 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 OCLNQ16625 522 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 OLFM4Q6UX06 510 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 C16orf71Q8IYS4 520 aaPredicted RBP8.22□□□□□ -1.09
HOXA9-206ENST00000497089 TNS4Q8IZW8 715 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 KIFC2Q96AC6 838 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 TRIM47Q96LD4 638 aa8.22□□□□□ -1.09
HOXA9-206ENST00000497089 NAP1L5Q96NT1 182 aaPredicted RBP8.22□□□□□ -1.09
HOXA9-206ENST00000497089 POLMQ9NP87 494 aaPredicted RBP8.22□□□□□ -1.09
HOXA9-206ENST00000497089 TTLL8A6PVC2 850 aa8.21□□□□□ -1.1
HOXA9-206ENST00000497089 BBOX1O75936 387 aa8.21□□□□□ -1.1
HOXA9-206ENST00000497089 TPM2P07951 284 aa8.21□□□□□ -1.1
HOXA9-206ENST00000497089 GPC1P35052 558 aa8.21□□□□□ -1.1
HOXA9-206ENST00000497089 IARSP41252 1262 aaKnown RBP8.21□□□□□ -1.1
HOXA9-206ENST00000497089 RNF144AP50876 292 aaPredicted RBP8.21□□□□□ -1.1
HOXA9-206ENST00000497089 SYNE4Q8N205 404 aa8.21□□□□□ -1.1
HOXA9-206ENST00000497089 SMC1BQ8NDV3 1235 aa8.21□□□□□ -1.1
HOXA9-206ENST00000497089 SCG3Q8WXD2 468 aaKnown RBP8.21□□□□□ -1.1
HOXA9-206ENST00000497089 VPS33BQ9H267 617 aa8.21□□□□□ -1.1
HOXA9-206ENST00000497089 ZNF277Q9NRM2 450 aaPredicted RBP8.21□□□□□ -1.1
HOXA9-206ENST00000497089 TRMT112Q9UI30 125 aaKnown RBP8.21□□□□□ -1.1
HOXA9-206ENST00000497089 ATP6V0A2Q9Y487 856 aa8.21□□□□□ -1.1
HOXA9-206ENST00000497089 LRRC37AA6NMS7 1700 aa8.2□□□□□ -1.1
HOXA9-206ENST00000497089 CACNA1FO60840 1977 aa8.2□□□□□ -1.1
HOXA9-206ENST00000497089 ABCC4O15439 1325 aa8.2□□□□□ -1.1
HOXA9-206ENST00000497089 CEP350Q5VT06 3117 aa8.2□□□□□ -1.1
HOXA9-206ENST00000497089 FZD9O00144 591 aa8.2□□□□□ -1.1
HOXA9-206ENST00000497089 ELL2O00472 640 aaPredicted RBP8.2□□□□□ -1.1
HOXA9-206ENST00000497089 HCLS1P14317 486 aaPredicted RBP8.2□□□□□ -1.1
HOXA9-206ENST00000497089 NCLP19338 710 aaKnown RBP8.2□□□□□ -1.1
HOXA9-206ENST00000497089 IGFBP4P22692 258 aa8.2□□□□□ -1.1
HOXA9-206ENST00000497089 SF3B3Q15393 1217 aaKnown RBP8.2□□□□□ -1.1
HOXA9-206ENST00000497089 FOXD4L5Q5VV16 416 aaPredicted RBP8.2□□□□□ -1.1
HOXA9-206ENST00000497089 CCDC30Q5VVM6 783 aa8.2□□□□□ -1.1
HOXA9-206ENST00000497089 SND1Q7KZF4 910 aaKnown RBP eCLIP8.2□□□□□ -1.1
HOXA9-206ENST00000497089 TAS1R3Q7RTX0 852 aa8.2□□□□□ -1.1
HOXA9-206ENST00000497089 TMC4Q7Z404 712 aa8.2□□□□□ -1.1
HOXA9-206ENST00000497089 WDR63Q8IWG1 891 aa8.2□□□□□ -1.1
HOXA9-206ENST00000497089 SP8Q8IXZ3 490 aa8.2□□□□□ -1.1
HOXA9-206ENST00000497089 TSPYL6Q8N831 410 aa8.2□□□□□ -1.1
HOXA9-206ENST00000497089 VTI1AQ96AJ9 217 aa8.2□□□□□ -1.1
HOXA9-206ENST00000497089 RTFDC1Q9BY42 306 aaPredicted RBP8.2□□□□□ -1.1
HOXA9-206ENST00000497089 PHAXQ9H814 394 aaKnown RBP8.2□□□□□ -1.1
HOXA9-206ENST00000497089 COL4A5P29400 1685 aa8.19□□□□□ -1.1
HOXA9-206ENST00000497089 DDNO94850 711 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms