RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 LMNB2Q03252 620 aa5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 LLGL2Q6P1M3 1020 aa5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 TRIM42Q8IWZ5 723 aa5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 SMG8Q8ND04 991 aaKnown RBP5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 DDX54Q8TDD1 881 aaKnown RBP5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 GPBAR1Q8TDU6 330 aa5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 CORO1BQ9BR76 489 aa5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 ZC3H12CQ9C0D7 883 aaKnown RBP5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 BCL11AQ9H165 835 aa5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 GSX1Q9H4S2 264 aaPredicted RBP5.23□□□□□ -1.57
EXOSC3-208ENST00000496910 C9orf172C9J069 976 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 AOC2O75106 756 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 PF4P02776 101 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 RLBP1P12271 317 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 LIG1P18858 919 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 NTF4P34130 210 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 CDK8P49336 464 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 RING1Q06587 406 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 CAMK2GQ13555 558 aaPredicted RBP5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 SEPT6Q14141 434 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 SF3A1Q15459 793 aaKnown RBP5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 EXOSC6Q5RKV6 272 aaKnown RBP5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 MAP1SQ66K74 1059 aaPredicted RBP5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 FBXL19Q6PCT2 694 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 BNC2Q6ZN30 1099 aaPredicted RBP5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 DEFB132Q7Z7B7 95 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 DZIP1LQ8IYY4 767 aaKnown RBP5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 WFDC12Q8WWY7 111 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 MEGF10Q96KG7 1140 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 UBL7Q96S82 380 aaPredicted RBP5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 RUSC1Q9BVN2 902 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 EMILIN2Q9BXX0 1053 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 RNF208Q9H0X6 261 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 PPP1R9AQ9ULJ8 1098 aa5.22□□□□□ -1.57
EXOSC3-208ENST00000496910 TNRC18O15417 2968 aaPredicted RBP5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 TMPRSS2O15393 492 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 CILPO75339 1184 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 ADH5P11766 374 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 CRKP46108 304 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 RGS19P49795 217 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 LRRC14Q15048 493 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 PLA2G4EQ3MJ16 856 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 ZC3H12AQ5D1E8 599 aaKnown RBP5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 DPH6Q7L8W6 267 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 CCDC84Q86UT8 332 aaPredicted RBP5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 USP48Q86UV5 1035 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 TXNRD3Q86VQ6 643 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 JMYQ8N9B5 988 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 FAM46AQ96IP4 442 aaKnown RBP5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 NACC1Q96RE7 527 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 LRRC3Q9BY71 257 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 TGIF2Q9GZN2 237 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 AKTIPQ9H8T0 292 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 SAMM50Q9Y512 469 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 CAMSAP1Q5T5Y3 1602 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 RUSC2Q8N2Y8 1516 aa5.21□□□□□ -1.58
EXOSC3-208ENST00000496910 GFRA2O00451 464 aa5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 F13A1P00488 732 aa5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 PROCP04070 461 aa5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 GBP2P32456 591 aaPredicted RBP5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 EIF4A3P38919 411 aaKnown RBP5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 PREPP48147 710 aa5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 IREB2P48200 963 aaKnown RBP5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 NRG1Q02297 640 aaPredicted RBP5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 FAM160A1Q05DH4 1040 aa5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 PWP1Q13610 501 aa5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 INPP5AQ14642 412 aa5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 MEX3CQ5U5Q3 659 aaKnown RBP5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 LRFN4Q6PJG9 635 aa5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 ARMC10Q8N2F6 343 aa5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 C2CD4AQ8NCU7 369 aaPredicted RBP5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 FBXO27Q8NI29 283 aa5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 UBE2Q2Q8WVN8 375 aa5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 KCNB2Q92953 911 aa5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 EAF1Q96JC9 268 aaPredicted RBP5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 CBX8Q9HC52 389 aa5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 CRIM1Q9NZV1 1036 aa5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 CFTRP13569 1480 aa5.2□□□□□ -1.58
EXOSC3-208ENST00000496910 MINDY4BA8MYZ0 360 aa5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 GDF11O95390 407 aa5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 APBA3O96018 575 aa5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 DRD2P14416 443 aa5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 GJA8P48165 433 aa5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 SOX4Q06945 474 aaPredicted RBP5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 ANKRD34AQ69YU3 496 aa5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 FAM196AQ6ZSG2 479 aa5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 CYFIP1Q7L576 1253 aa5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 RELL1Q8IUW5 271 aa5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 ZNF296Q8WUU4 475 aaPredicted RBP5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 GATAD2BQ8WXI9 593 aa5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 TINF2Q9BSI4 451 aa5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 ACBD3Q9H3P7 528 aa5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 DISC1Q9NRI5 854 aa5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 USP21Q9UK80 565 aa5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.19□□□□□ -1.58
EXOSC3-208ENST00000496910 NINLQ9Y2I6 1382 aa5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 RTEL1-TNFRSF6BF6WH68 1400 aa5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 MARCH6O60337 910 aa5.18□□□□□ -1.58
EXOSC3-208ENST00000496910 RAPGEF3O95398 923 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms