RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 WNT10AQ9GZT5 417 aa8.3□□□□□ -1.08
SNX13-211ENST00000496855 PIM2Q9P1W9 311 aa8.3□□□□□ -1.08
SNX13-211ENST00000496855 RPL6Q02878 288 aaKnown RBP8.29□□□□□ -1.08
SNX13-211ENST00000496855 DIEXFQ68CQ4 756 aaKnown RBP8.29□□□□□ -1.08
SNX13-211ENST00000496855 OGFOD3Q6PK18 319 aa8.29□□□□□ -1.08
SNX13-211ENST00000496855 UBE3DQ7Z6J8 389 aa8.29□□□□□ -1.08
SNX13-211ENST00000496855 KCT2Q8NC54 265 aa8.29□□□□□ -1.08
SNX13-211ENST00000496855 PSMG3-AS1Q96PY0 264 aa8.29□□□□□ -1.08
SNX13-211ENST00000496855 LEMD3Q9Y2U8 911 aa8.29□□□□□ -1.08
SNX13-211ENST00000496855 SCO2A0A1W2PP80 73 aa8.28□□□□□ -1.08
SNX13-211ENST00000496855 FAM221AA4D161 298 aa8.28□□□□□ -1.08
SNX13-211ENST00000496855 RECKO95980 971 aa8.28□□□□□ -1.08
SNX13-211ENST00000496855 FAM160A1Q05DH4 1040 aa8.28□□□□□ -1.08
SNX13-211ENST00000496855 DUSP27Q5VZP5 1158 aa8.28□□□□□ -1.08
SNX13-211ENST00000496855 ZNF765Q7L2R6 523 aa8.28□□□□□ -1.08
SNX13-211ENST00000496855 GATAD2BQ8WXI9 593 aa8.28□□□□□ -1.08
SNX13-211ENST00000496855 TACC3Q9Y6A5 838 aa8.28□□□□□ -1.08
SNX13-211ENST00000496855 COBLO75128 1261 aa8.27□□□□□ -1.09
SNX13-211ENST00000496855 CILPO75339 1184 aa8.27□□□□□ -1.09
SNX13-211ENST00000496855 F13A1P00488 732 aa8.27□□□□□ -1.09
SNX13-211ENST00000496855 FAM87AP0C7U9 286 aa8.27□□□□□ -1.09
SNX13-211ENST00000496855 ZNF76P36508 570 aa8.27□□□□□ -1.09
SNX13-211ENST00000496855 GRIK1P39086 918 aa8.27□□□□□ -1.09
SNX13-211ENST00000496855 ETF1P62495 437 aaKnown RBP8.27□□□□□ -1.09
SNX13-211ENST00000496855 LRP8Q14114 963 aa8.27□□□□□ -1.09
SNX13-211ENST00000496855 SNAP47Q5SQN1 464 aa8.27□□□□□ -1.09
SNX13-211ENST00000496855 INTS5Q6P9B9 1019 aaKnown RBP8.27□□□□□ -1.09
SNX13-211ENST00000496855 GOLM1Q8NBJ4 401 aa8.27□□□□□ -1.09
SNX13-211ENST00000496855 MRRFQ96E11 262 aaKnown RBP8.27□□□□□ -1.09
SNX13-211ENST00000496855 UNCXA6NJT0 531 aa8.26□□□□□ -1.09
SNX13-211ENST00000496855 BPNT1O95861 308 aa8.26□□□□□ -1.09
SNX13-211ENST00000496855 GARTP22102 1010 aa8.26□□□□□ -1.09
SNX13-211ENST00000496855 SSTR4P31391 388 aa8.26□□□□□ -1.09
SNX13-211ENST00000496855 GRK4P32298 578 aa8.26□□□□□ -1.09
SNX13-211ENST00000496855 CD97P48960 835 aa8.26□□□□□ -1.09
SNX13-211ENST00000496855 FANCCQ00597 558 aa8.26□□□□□ -1.09
SNX13-211ENST00000496855 FBRSQ9HAH7 460 aa8.26□□□□□ -1.09
SNX13-211ENST00000496855 METTL5Q9NRN9 209 aaKnown RBP8.26□□□□□ -1.09
SNX13-211ENST00000496855 MED26O95402 600 aa8.26□□□□□ -1.09
SNX13-211ENST00000496855 FOSL1P15407 271 aa8.26□□□□□ -1.09
SNX13-211ENST00000496855 EIF4A3P38919 411 aaKnown RBP8.26□□□□□ -1.09
SNX13-211ENST00000496855 CYP27C1Q4G0S4 372 aa8.26□□□□□ -1.09
SNX13-211ENST00000496855 ARTNQ5T4W7 220 aa8.26□□□□□ -1.09
SNX13-211ENST00000496855 HID1Q8IV36 788 aa8.26□□□□□ -1.09
SNX13-211ENST00000496855 Q8N3U1 123 aa8.26□□□□□ -1.09
SNX13-211ENST00000496855 DUSP23Q9BVJ7 150 aa8.26□□□□□ -1.09
SNX13-211ENST00000496855 KCNQ5Q9NR82 932 aa8.26□□□□□ -1.09
SNX13-211ENST00000496855 HYAL3O43820 417 aaPredicted RBP8.25□□□□□ -1.09
SNX13-211ENST00000496855 LEFTY1O75610 366 aa8.25□□□□□ -1.09
SNX13-211ENST00000496855 HOXA10P31260 410 aaPredicted RBP8.25□□□□□ -1.09
SNX13-211ENST00000496855 SLBPQ14493 270 aaKnown RBP eCLIP8.25□□□□□ -1.09
SNX13-211ENST00000496855 FBXL19Q6PCT2 694 aa8.25□□□□□ -1.09
SNX13-211ENST00000496855 TOP6BLQ8N6T0 577 aa8.25□□□□□ -1.09
SNX13-211ENST00000496855 KIAA1522Q9P206 1035 aaPredicted RBP8.25□□□□□ -1.09
SNX13-211ENST00000496855 CYP26A1O43174 497 aa8.24□□□□□ -1.09
SNX13-211ENST00000496855 LRIG2O94898 1065 aa8.24□□□□□ -1.09
SNX13-211ENST00000496855 CAP2P40123 477 aa8.24□□□□□ -1.09
SNX13-211ENST00000496855 PDE4BQ07343 736 aa8.24□□□□□ -1.09
SNX13-211ENST00000496855 NKG7Q16617 165 aa8.24□□□□□ -1.09
SNX13-211ENST00000496855 FAM196AQ6ZSG2 479 aa8.24□□□□□ -1.09
SNX13-211ENST00000496855 ARMCX6Q7L4S7 300 aa8.24□□□□□ -1.09
SNX13-211ENST00000496855 ZFP64Q9NPA5 681 aa8.24□□□□□ -1.09
SNX13-211ENST00000496855 PRDM10Q9NQV6 1147 aa8.24□□□□□ -1.09
SNX13-211ENST00000496855 KIAA1324LA8MWY0 1029 aaPredicted RBP8.23□□□□□ -1.09
SNX13-211ENST00000496855 SCAMP3O14828 347 aaKnown RBP8.23□□□□□ -1.09
SNX13-211ENST00000496855 PGRP06401 933 aa8.23□□□□□ -1.09
SNX13-211ENST00000496855 MPP2Q14168 576 aa8.23□□□□□ -1.09
SNX13-211ENST00000496855 ZNF296Q8WUU4 475 aaPredicted RBP8.23□□□□□ -1.09
SNX13-211ENST00000496855 RNF34Q969K3 372 aa8.23□□□□□ -1.09
SNX13-211ENST00000496855 PCMTD2Q9NV79 361 aa8.23□□□□□ -1.09
SNX13-211ENST00000496855 ADAMTS1Q9UHI8 967 aa8.23□□□□□ -1.09
SNX13-211ENST00000496855 SUPT16HQ9Y5B9 1047 aaKnown RBP8.23□□□□□ -1.09
SNX13-211ENST00000496855 GREM1O60565 184 aa8.22□□□□□ -1.09
SNX13-211ENST00000496855 FBXO27Q8NI29 283 aa8.22□□□□□ -1.09
SNX13-211ENST00000496855 FOXQ1Q9C009 403 aa8.22□□□□□ -1.09
SNX13-211ENST00000496855 LRRC4CQ9HCJ2 640 aa8.22□□□□□ -1.09
SNX13-211ENST00000496855 SPINK2P20155 84 aa8.21□□□□□ -1.09
SNX13-211ENST00000496855 MSMPQ1L6U9 139 aa8.21□□□□□ -1.09
SNX13-211ENST00000496855 REC114Q7Z4M0 266 aa8.21□□□□□ -1.09
SNX13-211ENST00000496855 TJP2Q9UDY2 1190 aa8.21□□□□□ -1.09
SNX13-211ENST00000496855 ADAM30Q9UKF2 790 aa8.21□□□□□ -1.09
SNX13-211ENST00000496855 CORINQ9Y5Q5 1042 aa8.21□□□□□ -1.09
SNX13-211ENST00000496855 ROBO2Q9HCK4 1378 aa8.21□□□□□ -1.1
SNX13-211ENST00000496855 CST3P01034 146 aaPredicted RBP8.2□□□□□ -1.1
SNX13-211ENST00000496855 USP48Q86UV5 1035 aa8.2□□□□□ -1.1
SNX13-211ENST00000496855 DTX1Q86Y01 620 aa8.2□□□□□ -1.1
SNX13-211ENST00000496855 MRPL41Q8IXM3 137 aaKnown RBP8.2□□□□□ -1.1
SNX13-211ENST00000496855 MFSD2AQ8NA29 543 aa8.2□□□□□ -1.1
SNX13-211ENST00000496855 LRRC3Q9BY71 257 aa8.2□□□□□ -1.1
SNX13-211ENST00000496855 POLR3KQ9Y2Y1 108 aaPredicted RBP8.2□□□□□ -1.1
SNX13-211ENST00000496855 TLR3O15455 904 aaKnown RBP8.19□□□□□ -1.1
SNX13-211ENST00000496855 PLCG1P19174 1290 aa8.19□□□□□ -1.1
SNX13-211ENST00000496855 RANGAP1P46060 587 aaPredicted RBP8.19□□□□□ -1.1
SNX13-211ENST00000496855 CWF19L2Q2TBE0 894 aaKnown RBP8.19□□□□□ -1.1
SNX13-211ENST00000496855 PRAMEF13Q5VWM6 474 aa8.19□□□□□ -1.1
SNX13-211ENST00000496855 SLC6A19Q695T7 634 aa8.19□□□□□ -1.1
SNX13-211ENST00000496855 TMEM87BQ96K49 555 aa8.19□□□□□ -1.1
SNX13-211ENST00000496855 ZC3H7BQ9UGR2 993 aaKnown RBP8.19□□□□□ -1.1
SNX13-211ENST00000496855 PRR36Q9H6K5 1346 aa8.19□□□□□ -1.1
SNX13-211ENST00000496855 LOC100996750A0A140TA64 210 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms