RNA–Protein interactions for RNA: ENST00000496489.5

NCK1-212, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-212ENST00000496489 USP35Q9P2H5 1018 aa4.44□□□□□ -1.7
NCK1-212ENST00000496489 PPT2Q9UMR5 302 aa4.44□□□□□ -1.7
NCK1-212ENST00000496489 HIF3AQ9Y2N7 669 aa4.44□□□□□ -1.7
NCK1-212ENST00000496489 PCDHB14Q9Y5E9 798 aa4.44□□□□□ -1.7
NCK1-212ENST00000496489 HCLS1P14317 486 aaPredicted RBP4.43□□□□□ -1.7
NCK1-212ENST00000496489 ATF4P18848 351 aaPredicted RBP4.43□□□□□ -1.7
NCK1-212ENST00000496489 RAB6AP20340 208 aa4.43□□□□□ -1.7
NCK1-212ENST00000496489 GRK4P32298 578 aa4.43□□□□□ -1.7
NCK1-212ENST00000496489 ZNF165P49910 485 aa4.43□□□□□ -1.7
NCK1-212ENST00000496489 ETF1P62495 437 aaKnown RBP4.43□□□□□ -1.7
NCK1-212ENST00000496489 SOX4Q06945 474 aaPredicted RBP4.43□□□□□ -1.7
NCK1-212ENST00000496489 COL9A2Q14055 689 aaPredicted RBP4.43□□□□□ -1.7
NCK1-212ENST00000496489 Q6ZS46 218 aa4.43□□□□□ -1.7
NCK1-212ENST00000496489 GK5Q6ZS86 529 aa4.43□□□□□ -1.7
NCK1-212ENST00000496489 MCF2L2Q86YR7 1114 aa4.43□□□□□ -1.7
NCK1-212ENST00000496489 SLITRK4Q8IW52 837 aa4.43□□□□□ -1.7
NCK1-212ENST00000496489 TMEM130Q8N3G9 435 aa4.43□□□□□ -1.7
NCK1-212ENST00000496489 C2CD4AQ8NCU7 369 aaPredicted RBP4.43□□□□□ -1.7
NCK1-212ENST00000496489 FANCD2OSQ96PS1 177 aa4.43□□□□□ -1.7
NCK1-212ENST00000496489 SSBP4Q9BWG4 385 aaPredicted RBP4.43□□□□□ -1.7
NCK1-212ENST00000496489 FAM105AQ9NUU6 356 aa4.43□□□□□ -1.7
NCK1-212ENST00000496489 CRIM1Q9NZV1 1036 aa4.43□□□□□ -1.7
NCK1-212ENST00000496489 PPP1R1BQ9UD71 204 aaPredicted RBP4.43□□□□□ -1.7
NCK1-212ENST00000496489 PRKAG2Q9UGJ0 569 aa4.43□□□□□ -1.7
NCK1-212ENST00000496489 POLR3KQ9Y2Y1 108 aaPredicted RBP4.43□□□□□ -1.7
NCK1-212ENST00000496489 CORINQ9Y5Q5 1042 aa4.43□□□□□ -1.7
NCK1-212ENST00000496489 ACTL7BQ9Y614 415 aa4.43□□□□□ -1.7
NCK1-212ENST00000496489 SNCAIPQ9Y6H5 919 aa4.43□□□□□ -1.7
NCK1-212ENST00000496489 GFRA2O00451 464 aa4.42□□□□□ -1.7
NCK1-212ENST00000496489 HYAL3O43820 417 aaPredicted RBP4.42□□□□□ -1.7
NCK1-212ENST00000496489 RNGTTO60942 597 aaKnown RBP4.42□□□□□ -1.7
NCK1-212ENST00000496489 HTR3BO95264 441 aa4.42□□□□□ -1.7
NCK1-212ENST00000496489 SSBP05455 408 aaKnown RBP eCLIP4.42□□□□□ -1.7
NCK1-212ENST00000496489 FGRP09769 529 aa4.42□□□□□ -1.7
NCK1-212ENST00000496489 ASPAP45381 313 aa4.42□□□□□ -1.7
NCK1-212ENST00000496489 SOX9P48436 509 aa4.42□□□□□ -1.7
NCK1-212ENST00000496489 USP11P51784 963 aa4.42□□□□□ -1.7
NCK1-212ENST00000496489 ERVK-24P63145 666 aa4.42□□□□□ -1.7
NCK1-212ENST00000496489 CLCQ05315 142 aa4.42□□□□□ -1.7
NCK1-212ENST00000496489 TTLL4Q14679 1199 aa4.42□□□□□ -1.7
NCK1-212ENST00000496489 ZBTB37Q5TC79 503 aa4.42□□□□□ -1.7
NCK1-212ENST00000496489 CYFIP1Q7L576 1253 aa4.42□□□□□ -1.7
NCK1-212ENST00000496489 CPLX3Q8WVH0 158 aa4.42□□□□□ -1.7
NCK1-212ENST00000496489 UTP4Q969X6 686 aaKnown RBP4.42□□□□□ -1.7
NCK1-212ENST00000496489 SEC16BQ96JE7 1060 aa4.42□□□□□ -1.7
NCK1-212ENST00000496489 MEGF10Q96KG7 1140 aa4.42□□□□□ -1.7
NCK1-212ENST00000496489 DISC1Q9NRI5 854 aa4.42□□□□□ -1.7
NCK1-212ENST00000496489 SYNGAP1Q96PV0 1343 aa4.42□□□□□ -1.7
NCK1-212ENST00000496489 PGRP06401 933 aa4.41□□□□□ -1.7
NCK1-212ENST00000496489 NEFMP07197 916 aa4.41□□□□□ -1.7
NCK1-212ENST00000496489 PLCG1P19174 1290 aa4.41□□□□□ -1.7
NCK1-212ENST00000496489 RXRBP28702 533 aa4.41□□□□□ -1.7
NCK1-212ENST00000496489 PDE4BQ07343 736 aa4.41□□□□□ -1.7
NCK1-212ENST00000496489 LRP8Q14114 963 aa4.41□□□□□ -1.7
NCK1-212ENST00000496489 SGO2Q562F6 1265 aa4.41□□□□□ -1.7
NCK1-212ENST00000496489 REXO1Q8N1G1 1221 aaKnown RBP4.41□□□□□ -1.7
NCK1-212ENST00000496489 ANAPC16Q96DE5 110 aa4.41□□□□□ -1.7
NCK1-212ENST00000496489 UBL7Q96S82 380 aaPredicted RBP4.41□□□□□ -1.7
NCK1-212ENST00000496489 SRRTQ9BXP5 876 aaKnown RBP4.41□□□□□ -1.7
NCK1-212ENST00000496489 KRTAP9-2Q9BYQ4 174 aa4.41□□□□□ -1.7
NCK1-212ENST00000496489 SSU72Q9NP77 194 aaKnown RBP4.41□□□□□ -1.7
NCK1-212ENST00000496489 KLHL3Q9UH77 587 aa4.41□□□□□ -1.7
NCK1-212ENST00000496489 ZNRF3Q9ULT6 936 aa4.41□□□□□ -1.7
NCK1-212ENST00000496489 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.4□□□□□ -1.71
NCK1-212ENST00000496489 FANCGO15287 622 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 ATP2B1P20020 1258 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 GTF2F1P35269 517 aaKnown RBP eCLIP4.4□□□□□ -1.71
NCK1-212ENST00000496489 MLECQ14165 292 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 UVSSAQ2YD98 709 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.4□□□□□ -1.71
NCK1-212ENST00000496489 CDC37L1Q7L3B6 337 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 UBE3DQ7Z6J8 389 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 SMYD4Q8IYR2 804 aaPredicted RBP4.4□□□□□ -1.71
NCK1-212ENST00000496489 RNF214Q8ND24 703 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 FBLIM1Q8WUP2 373 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 DHX38Q92620 1227 aaKnown RBP4.4□□□□□ -1.71
NCK1-212ENST00000496489 ISL2Q96A47 359 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 FAM46AQ96IP4 442 aaKnown RBP4.4□□□□□ -1.71
NCK1-212ENST00000496489 DRC1Q96MC2 740 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 GMLQ99445 158 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 YIPF2Q9BWQ6 316 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 WNT10AQ9GZT5 417 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 LGR6Q9HBX8 967 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 REV1Q9UBZ9 1251 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 STRIP2Q9ULQ0 834 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 DAGLAQ9Y4D2 1042 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 TACC3Q9Y6A5 838 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 MRVI1Q9Y6F6 885 aa4.4□□□□□ -1.71
NCK1-212ENST00000496489 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.39□□□□□ -1.71
NCK1-212ENST00000496489 IGSF3O75054 1194 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 STK10O94804 968 aaKnown RBP4.39□□□□□ -1.71
NCK1-212ENST00000496489 ATE1O95260 518 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 IMPDH2P12268 514 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 BMP3P12645 472 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 NTF4P34130 210 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 EIF6P56537 245 aaKnown RBP4.39□□□□□ -1.71
NCK1-212ENST00000496489 RING1Q06587 406 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 OVOS1Q6IE37 1185 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 CDPF1Q6NVV7 123 aa4.39□□□□□ -1.71
NCK1-212ENST00000496489 SLC51AQ86UW1 340 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms