RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 SERPINB13Q9UIV8 391 aa21.85■■□□□ 1.09
TSSC4-210ENST00000496468 OTOFQ9HC10 1997 aa21.85■■□□□ 1.09
TSSC4-210ENST00000496468 PLCD1P51178 756 aa21.84■■□□□ 1.09
TSSC4-210ENST00000496468 PPARAQ07869 468 aa21.84■■□□□ 1.09
TSSC4-210ENST00000496468 HERC5Q9UII4 1024 aaKnown RBP21.84■■□□□ 1.09
TSSC4-210ENST00000496468 RBM8AQ9Y5S9 174 aaKnown RBP21.84■■□□□ 1.09
TSSC4-210ENST00000496468 PASKQ96RG2 1323 aa21.83■■□□□ 1.09
TSSC4-210ENST00000496468 EVX2Q03828 476 aa21.83■■□□□ 1.09
TSSC4-210ENST00000496468 FMR1Q06787 632 aaKnown RBP eCLIP21.83■■□□□ 1.09
TSSC4-210ENST00000496468 IMMTQ16891 758 aaKnown RBP21.83■■□□□ 1.09
TSSC4-210ENST00000496468 MAP4K1Q92918 833 aa21.83■■□□□ 1.09
TSSC4-210ENST00000496468 FAM196BA6NMK8 535 aa21.82■■□□□ 1.08
TSSC4-210ENST00000496468 CELF2O95319 508 aaKnown RBP21.82■■□□□ 1.08
TSSC4-210ENST00000496468 SLC3A2P08195 630 aaKnown RBP21.82■■□□□ 1.08
TSSC4-210ENST00000496468 HAND2P61296 217 aa21.82■■□□□ 1.08
TSSC4-210ENST00000496468 MIGA2Q7L4E1 593 aa21.82■■□□□ 1.08
TSSC4-210ENST00000496468 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.82■■□□□ 1.08
TSSC4-210ENST00000496468 ZNF213O14771 459 aa21.81■■□□□ 1.08
TSSC4-210ENST00000496468 PPP1R12BO60237 982 aaPredicted RBP21.81■■□□□ 1.08
TSSC4-210ENST00000496468 TTLL12Q14166 644 aaPredicted RBP21.81■■□□□ 1.08
TSSC4-210ENST00000496468 C16orf86Q6ZW13 317 aa21.81■■□□□ 1.08
TSSC4-210ENST00000496468 METTL16Q86W50 562 aaKnown RBP21.81■■□□□ 1.08
TSSC4-210ENST00000496468 ZNF341Q9BYN7 854 aa21.81■■□□□ 1.08
TSSC4-210ENST00000496468 DNAJC18Q9H819 358 aa21.81■■□□□ 1.08
TSSC4-210ENST00000496468 ANAPC4Q9UJX5 808 aa21.81■■□□□ 1.08
TSSC4-210ENST00000496468 TAOK2Q9UL54 1235 aa21.81■■□□□ 1.08
TSSC4-210ENST00000496468 DOCK1Q14185 1865 aa21.8■■□□□ 1.08
TSSC4-210ENST00000496468 SMIM22K7EJ46 135 aa21.8■■□□□ 1.08
TSSC4-210ENST00000496468 TBC1D12O60347 775 aa21.8■■□□□ 1.08
TSSC4-210ENST00000496468 CTDSPL2Q05D32 466 aa21.8■■□□□ 1.08
TSSC4-210ENST00000496468 GABPAQ06546 454 aa21.8■■□□□ 1.08
TSSC4-210ENST00000496468 PRKG1Q13976 671 aa21.8■■□□□ 1.08
TSSC4-210ENST00000496468 FOXP4Q8IVH2 680 aaPredicted RBP21.8■■□□□ 1.08
TSSC4-210ENST00000496468 SLC44A5Q8NCS7 719 aa21.8■■□□□ 1.08
TSSC4-210ENST00000496468 DYNLL2Q96FJ2 89 aa21.8■■□□□ 1.08
TSSC4-210ENST00000496468 SWAP70Q9UH65 585 aa21.8■■□□□ 1.08
TSSC4-210ENST00000496468 ATAD5Q96QE3 1844 aa21.79■■□□□ 1.08
TSSC4-210ENST00000496468 EPB41L2O43491 1005 aaKnown RBP21.79■■□□□ 1.08
TSSC4-210ENST00000496468 SLURP2P0DP57 97 aa21.79■■□□□ 1.08
TSSC4-210ENST00000496468 IREB2P48200 963 aaKnown RBP21.79■■□□□ 1.08
TSSC4-210ENST00000496468 TBC1D10CQ8IV04 446 aa21.79■■□□□ 1.08
TSSC4-210ENST00000496468 STK11IPQ8N1F8 1099 aa21.79■■□□□ 1.08
TSSC4-210ENST00000496468 GBA2Q9HCG7 927 aaPredicted RBP21.79■■□□□ 1.08
TSSC4-210ENST00000496468 FKBP1BP68106 108 aa21.78■■□□□ 1.08
TSSC4-210ENST00000496468 MAP3K10Q02779 954 aa21.78■■□□□ 1.08
TSSC4-210ENST00000496468 PDE4BQ07343 736 aa21.78■■□□□ 1.08
TSSC4-210ENST00000496468 RNF20Q5VTR2 975 aa21.78■■□□□ 1.08
TSSC4-210ENST00000496468 ARMC9Q7Z3E5 817 aa21.78■■□□□ 1.08
TSSC4-210ENST00000496468 WRNIP1Q96S55 665 aa21.78■■□□□ 1.08
TSSC4-210ENST00000496468 ZNF287Q9HBT7 754 aa21.78■■□□□ 1.08
TSSC4-210ENST00000496468 ANGEL1Q9UNK9 670 aaKnown RBP21.78■■□□□ 1.08
TSSC4-210ENST00000496468 FZD1Q9UP38 647 aa21.78■■□□□ 1.08
TSSC4-210ENST00000496468 CYP21A2P08686 494 aa21.77■■□□□ 1.08
TSSC4-210ENST00000496468 MCCP23508 829 aa21.77■■□□□ 1.08
TSSC4-210ENST00000496468 SHMT1P34896 483 aa21.77■■□□□ 1.08
TSSC4-210ENST00000496468 CREB3L3Q68CJ9 461 aa21.77■■□□□ 1.08
TSSC4-210ENST00000496468 C2orf69Q8N8R5 385 aa21.77■■□□□ 1.08
TSSC4-210ENST00000496468 STAG1Q8WVM7 1258 aa21.77■■□□□ 1.08
TSSC4-210ENST00000496468 NBPF3Q9H094 633 aa21.77■■□□□ 1.08
TSSC4-210ENST00000496468 RNF41Q9H4P4 317 aaPredicted RBP21.77■■□□□ 1.08
TSSC4-210ENST00000496468 SLC27A2O14975 620 aa21.76■■□□□ 1.07
TSSC4-210ENST00000496468 CDK8P49336 464 aa21.76■■□□□ 1.07
TSSC4-210ENST00000496468 AKNAD1Q5T1N1 836 aa21.76■■□□□ 1.07
TSSC4-210ENST00000496468 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.76■■□□□ 1.07
TSSC4-210ENST00000496468 KLRG1Q96E93 195 aa21.76■■□□□ 1.07
TSSC4-210ENST00000496468 MKNK2Q9HBH9 465 aa21.76■■□□□ 1.07
TSSC4-210ENST00000496468 PRDM1O75626 825 aa21.75■■□□□ 1.07
TSSC4-210ENST00000496468 SEC24BO95487 1268 aa21.75■■□□□ 1.07
TSSC4-210ENST00000496468 PCP11498 1178 aaKnown RBP21.75■■□□□ 1.07
TSSC4-210ENST00000496468 NECTIN1Q15223 517 aa21.75■■□□□ 1.07
TSSC4-210ENST00000496468 MAP3K11Q16584 847 aa21.75■■□□□ 1.07
TSSC4-210ENST00000496468 CST9Q5W186 159 aa21.75■■□□□ 1.07
TSSC4-210ENST00000496468 MOB2Q70IA6 237 aa21.75■■□□□ 1.07
TSSC4-210ENST00000496468 USP26Q9BXU7 913 aa21.75■■□□□ 1.07
TSSC4-210ENST00000496468 TOMM22Q9NS69 142 aa21.75■■□□□ 1.07
TSSC4-210ENST00000496468 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.75■■□□□ 1.07
TSSC4-210ENST00000496468 NEDD4P46934 1319 aa21.75■■□□□ 1.07
TSSC4-210ENST00000496468 PHF20L1A8MW92 1017 aa21.74■■□□□ 1.07
TSSC4-210ENST00000496468 USP2O75604 605 aaPredicted RBP21.74■■□□□ 1.07
TSSC4-210ENST00000496468 HSPA4P34932 840 aa21.74■■□□□ 1.07
TSSC4-210ENST00000496468 TATDN1Q6P1N9 297 aa21.74■■□□□ 1.07
TSSC4-210ENST00000496468 MFSD6Q6ZSS7 791 aa21.74■■□□□ 1.07
TSSC4-210ENST00000496468 ZNF112Q9UJU3 913 aa21.74■■□□□ 1.07
TSSC4-210ENST00000496468 CSADQ9Y600 493 aa21.74■■□□□ 1.07
TSSC4-210ENST00000496468 TMEM88BA6NKF7 163 aa21.73■■□□□ 1.07
TSSC4-210ENST00000496468 GDF11O95390 407 aa21.73■■□□□ 1.07
TSSC4-210ENST00000496468 ZKSCAN1P17029 563 aaPredicted RBP21.73■■□□□ 1.07
TSSC4-210ENST00000496468 CERKLQ49MI3 558 aaPredicted RBP21.73■■□□□ 1.07
TSSC4-210ENST00000496468 RRP12Q5JTH9 1297 aaKnown RBP21.73■■□□□ 1.07
TSSC4-210ENST00000496468 UPF2Q9HAU5 1272 aaKnown RBP21.73■■□□□ 1.07
TSSC4-210ENST00000496468 GREB1LQ9C091 1923 aaPredicted RBP21.72■■□□□ 1.07
TSSC4-210ENST00000496468 ORC4O43929 436 aa21.72■■□□□ 1.07
TSSC4-210ENST00000496468 RASA1P20936 1047 aa21.72■■□□□ 1.07
TSSC4-210ENST00000496468 INPP5BP32019 993 aa21.72■■□□□ 1.07
TSSC4-210ENST00000496468 VGLL4Q14135 290 aa21.72■■□□□ 1.07
TSSC4-210ENST00000496468 ANKRD13AQ8IZ07 590 aa21.72■■□□□ 1.07
TSSC4-210ENST00000496468 BACH2Q9BYV9 841 aa21.72■■□□□ 1.07
TSSC4-210ENST00000496468 CNNM2Q9H8M5 875 aa21.72■■□□□ 1.07
TSSC4-210ENST00000496468 TAF6LQ9Y6J9 622 aa21.72■■□□□ 1.07
TSSC4-210ENST00000496468 PLIN4Q96Q06 1357 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms