RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 CSADQ9Y600 493 aa6.81□□□□□ -1.32
CLK1-214ENST00000496205 PITPNM2Q9BZ72 1349 aa6.8□□□□□ -1.32
CLK1-214ENST00000496205 EOMESO95936 686 aa6.8□□□□□ -1.32
CLK1-214ENST00000496205 AFMP43652 599 aa6.8□□□□□ -1.32
CLK1-214ENST00000496205 LILRA6Q6PI73 481 aa6.8□□□□□ -1.32
CLK1-214ENST00000496205 AEBP1Q8IUX7 1158 aa6.8□□□□□ -1.32
CLK1-214ENST00000496205 C19orf73Q9NVV2 129 aa6.8□□□□□ -1.32
CLK1-214ENST00000496205 CACNA2D2Q9NY47 1150 aa6.8□□□□□ -1.32
CLK1-214ENST00000496205 GLI1P08151 1106 aa6.79□□□□□ -1.32
CLK1-214ENST00000496205 C1QTNF9P0C862 333 aa6.79□□□□□ -1.32
CLK1-214ENST00000496205 ZNF252P-AS1Q0IIN9 211 aa6.79□□□□□ -1.32
CLK1-214ENST00000496205 CITED4Q96RK1 184 aa6.79□□□□□ -1.32
CLK1-214ENST00000496205 CSRNP1Q96S65 589 aa6.79□□□□□ -1.32
CLK1-214ENST00000496205 USTQ9Y2C2 406 aa6.79□□□□□ -1.32
CLK1-214ENST00000496205 CNTNAP4Q9C0A0 1308 aa6.78□□□□□ -1.32
CLK1-214ENST00000496205 ZSCAN22P10073 491 aaPredicted RBP6.78□□□□□ -1.32
CLK1-214ENST00000496205 HNRNPUQ00839 825 aaKnown RBP eCLIP6.78□□□□□ -1.32
CLK1-214ENST00000496205 ANKLE2Q86XL3 938 aa6.78□□□□□ -1.32
CLK1-214ENST00000496205 SIAH1Q8IUQ4 282 aa6.78□□□□□ -1.32
CLK1-214ENST00000496205 ZSCAN18Q8TBC5 510 aaPredicted RBP6.78□□□□□ -1.32
CLK1-214ENST00000496205 GRIN3AQ8TCU5 1115 aa6.78□□□□□ -1.32
CLK1-214ENST00000496205 KIRREL1Q96J84 757 aa6.78□□□□□ -1.32
CLK1-214ENST00000496205 PPP1R16BQ96T49 567 aa6.78□□□□□ -1.32
CLK1-214ENST00000496205 CARS2Q9HA77 564 aaKnown RBP6.78□□□□□ -1.32
CLK1-214ENST00000496205 DCDC2CA8MYV0 355 aa6.77□□□□□ -1.33
CLK1-214ENST00000496205 RBAK-RBAKDNI3L0D1 243 aa6.77□□□□□ -1.33
CLK1-214ENST00000496205 NME2P22392 152 aa6.77□□□□□ -1.33
CLK1-214ENST00000496205 RING1Q06587 406 aa6.77□□□□□ -1.33
CLK1-214ENST00000496205 MPZL3Q6UWV2 235 aa6.77□□□□□ -1.33
CLK1-214ENST00000496205 CYFIP1Q7L576 1253 aa6.77□□□□□ -1.33
CLK1-214ENST00000496205 C12orf40Q86WS4 652 aa6.77□□□□□ -1.33
CLK1-214ENST00000496205 TMC1Q8TDI8 760 aa6.77□□□□□ -1.33
CLK1-214ENST00000496205 BCO2Q9BYV7 579 aa6.77□□□□□ -1.33
CLK1-214ENST00000496205 KCNK12Q9HB15 430 aa6.77□□□□□ -1.33
CLK1-214ENST00000496205 SEMA3GQ9NS98 782 aa6.77□□□□□ -1.33
CLK1-214ENST00000496205 LMCD1Q9NZU5 365 aa6.77□□□□□ -1.33
CLK1-214ENST00000496205 PRR33A8MZF0 331 aa6.76□□□□□ -1.33
CLK1-214ENST00000496205 CLCN7P51798 805 aa6.76□□□□□ -1.33
CLK1-214ENST00000496205 TMEM67Q5HYA8 995 aa6.76□□□□□ -1.33
CLK1-214ENST00000496205 ACSBG1Q96GR2 724 aa6.76□□□□□ -1.33
CLK1-214ENST00000496205 HSPA12BQ96MM6 686 aa6.76□□□□□ -1.33
CLK1-214ENST00000496205 CBX8Q9HC52 389 aa6.76□□□□□ -1.33
CLK1-214ENST00000496205 ATP13A1Q9HD20 1204 aa6.76□□□□□ -1.33
CLK1-214ENST00000496205 AKAP2Q9Y2D5 859 aa6.76□□□□□ -1.33
CLK1-214ENST00000496205 NCANO14594 1321 aa6.76□□□□□ -1.33
CLK1-214ENST00000496205 ZBTB7CA1YPR0 619 aa6.75□□□□□ -1.33
CLK1-214ENST00000496205 GNAT3A8MTJ3 354 aa6.75□□□□□ -1.33
CLK1-214ENST00000496205 PRRG2O14669 202 aa6.75□□□□□ -1.33
CLK1-214ENST00000496205 BMP6P22004 513 aa6.75□□□□□ -1.33
CLK1-214ENST00000496205 XRCC5P13010 732 aaKnown RBP6.74□□□□□ -1.33
CLK1-214ENST00000496205 NXPE4Q6UWF7 544 aa6.74□□□□□ -1.33
CLK1-214ENST00000496205 TTLL10Q6ZVT0 673 aa6.74□□□□□ -1.33
CLK1-214ENST00000496205 DIRC2Q96SL1 478 aa6.74□□□□□ -1.33
CLK1-214ENST00000496205 EMILIN2Q9BXX0 1053 aa6.74□□□□□ -1.33
CLK1-214ENST00000496205 PRDM5Q9NQX1 630 aaPredicted RBP6.74□□□□□ -1.33
CLK1-214ENST00000496205 PPP4R2Q9NY27 417 aa6.74□□□□□ -1.33
CLK1-214ENST00000496205 PAGE1O75459 146 aa6.73□□□□□ -1.33
CLK1-214ENST00000496205 SLITRK5O94991 958 aa6.73□□□□□ -1.33
CLK1-214ENST00000496205 GDNFP39905 211 aa6.73□□□□□ -1.33
CLK1-214ENST00000496205 ZBTB37Q5TC79 503 aa6.73□□□□□ -1.33
CLK1-214ENST00000496205 RASIP1Q5U651 963 aa6.73□□□□□ -1.33
CLK1-214ENST00000496205 ARMCX6Q7L4S7 300 aa6.73□□□□□ -1.33
CLK1-214ENST00000496205 ALKBH8Q96BT7 664 aaKnown RBP6.73□□□□□ -1.33
CLK1-214ENST00000496205 NECAB3Q96P71 396 aaPredicted RBP6.73□□□□□ -1.33
CLK1-214ENST00000496205 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
CLK1-214ENST00000496205 FOXQ1Q9C009 403 aa6.73□□□□□ -1.33
CLK1-214ENST00000496205 NSUN3Q9H649 340 aaKnown RBP6.73□□□□□ -1.33
CLK1-214ENST00000496205 NLRP2Q9NX02 1062 aa6.73□□□□□ -1.33
CLK1-214ENST00000496205 B8ZZF3 427 aa6.72□□□□□ -1.33
CLK1-214ENST00000496205 NPIPB6E9PJ23 425 aa6.72□□□□□ -1.33
CLK1-214ENST00000496205 NFIBO00712 420 aa6.72□□□□□ -1.33
CLK1-214ENST00000496205 FANCGO15287 622 aa6.72□□□□□ -1.33
CLK1-214ENST00000496205 BRD1O95696 1058 aa6.72□□□□□ -1.33
CLK1-214ENST00000496205 CDKAL1Q5VV42 579 aa6.72□□□□□ -1.33
CLK1-214ENST00000496205 FBXO15Q8NCQ5 510 aaPredicted RBP6.72□□□□□ -1.33
CLK1-214ENST00000496205 C3orf58Q8NDZ4 430 aa6.72□□□□□ -1.33
CLK1-214ENST00000496205 MAPK8IP1Q9UQF2 711 aa6.72□□□□□ -1.33
CLK1-214ENST00000496205 ENC1O14682 589 aa6.71□□□□□ -1.34
CLK1-214ENST00000496205 BUD31P41223 144 aaPredicted RBP6.71□□□□□ -1.34
CLK1-214ENST00000496205 AMIGO3Q86WK7 504 aa6.71□□□□□ -1.34
CLK1-214ENST00000496205 NPAS4Q8IUM7 802 aa6.71□□□□□ -1.34
CLK1-214ENST00000496205 DMRTB1Q96MA1 342 aa6.71□□□□□ -1.34
CLK1-214ENST00000496205 RBCK1Q9BYM8 510 aa6.71□□□□□ -1.34
CLK1-214ENST00000496205 GZF1Q9H116 711 aaPredicted RBP6.71□□□□□ -1.34
CLK1-214ENST00000496205 PICK1Q9NRD5 415 aa6.71□□□□□ -1.34
CLK1-214ENST00000496205 H3BS24 57 aa6.7□□□□□ -1.34
CLK1-214ENST00000496205 LRIG2O94898 1065 aa6.7□□□□□ -1.34
CLK1-214ENST00000496205 TRIM37O94972 964 aa6.7□□□□□ -1.34
CLK1-214ENST00000496205 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.7□□□□□ -1.34
CLK1-214ENST00000496205 TPTE2Q6XPS3 522 aa6.7□□□□□ -1.34
CLK1-214ENST00000496205 CDC37L1Q7L3B6 337 aa6.7□□□□□ -1.34
CLK1-214ENST00000496205 RIN3Q8TB24 985 aa6.7□□□□□ -1.34
CLK1-214ENST00000496205 ST14Q9Y5Y6 855 aa6.7□□□□□ -1.34
CLK1-214ENST00000496205 FAM155AB1AL88 458 aaPredicted RBP6.69□□□□□ -1.34
CLK1-214ENST00000496205 FGD1P98174 961 aa6.69□□□□□ -1.34
CLK1-214ENST00000496205 TXNDC2Q86VQ3 553 aa6.69□□□□□ -1.34
CLK1-214ENST00000496205 FBRSQ9HAH7 460 aa6.69□□□□□ -1.34
CLK1-214ENST00000496205 CD320Q9NPF0 282 aa6.69□□□□□ -1.34
CLK1-214ENST00000496205 PCDHA4Q9UN74 947 aa6.69□□□□□ -1.34
CLK1-214ENST00000496205 FBXO24O75426 580 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms