RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 TOMM70O94826 608 aa16.1■□□□□ 0.17
PTPN7-218ENST00000496197 GABPAQ06546 454 aa16.1■□□□□ 0.17
PTPN7-218ENST00000496197 PPARAQ07869 468 aa16.1■□□□□ 0.17
PTPN7-218ENST00000496197 KIAA1211Q6ZU35 1233 aa16.1■□□□□ 0.17
PTPN7-218ENST00000496197 NACAP1Q9BZK3 213 aa16.1■□□□□ 0.17
PTPN7-218ENST00000496197 DHX36Q9H2U1 1008 aaKnown RBP16.1■□□□□ 0.17
PTPN7-218ENST00000496197 DOCK1Q14185 1865 aa16.09■□□□□ 0.17
PTPN7-218ENST00000496197 GREB1LQ9C091 1923 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-218ENST00000496197 PASKQ96RG2 1323 aa16.09■□□□□ 0.17
PTPN7-218ENST00000496197 CYP21A2P08686 494 aa16.09■□□□□ 0.17
PTPN7-218ENST00000496197 COL9A3Q14050 684 aaPredicted RBP16.09■□□□□ 0.17
PTPN7-218ENST00000496197 RRP1BQ14684 758 aaKnown RBP16.09■□□□□ 0.17
PTPN7-218ENST00000496197 NECTIN1Q15223 517 aa16.09■□□□□ 0.17
PTPN7-218ENST00000496197 MOB2Q70IA6 237 aa16.09■□□□□ 0.17
PTPN7-218ENST00000496197 TBC1D10CQ8IV04 446 aa16.09■□□□□ 0.17
PTPN7-218ENST00000496197 RBM46Q8TBY0 533 aaKnown RBP16.09■□□□□ 0.17
PTPN7-218ENST00000496197 USP26Q9BXU7 913 aa16.09■□□□□ 0.17
PTPN7-218ENST00000496197 PRKG1Q13976 671 aa16.08■□□□□ 0.16
PTPN7-218ENST00000496197 SHROOM1Q2M3G4 852 aaPredicted RBP16.08■□□□□ 0.16
PTPN7-218ENST00000496197 METTL16Q86W50 562 aaKnown RBP16.08■□□□□ 0.16
PTPN7-218ENST00000496197 SMC1BQ8NDV3 1235 aa16.08■□□□□ 0.16
PTPN7-218ENST00000496197 DDRGK1Q96HY6 314 aa16.08■□□□□ 0.16
PTPN7-218ENST00000496197 BACH2Q9BYV9 841 aa16.08■□□□□ 0.16
PTPN7-218ENST00000496197 ZNF408Q9H9D4 720 aa16.08■□□□□ 0.16
PTPN7-218ENST00000496197 PI4KBQ9UBF8 816 aa16.08■□□□□ 0.16
PTPN7-218ENST00000496197 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
PTPN7-218ENST00000496197 PHIPQ8WWQ0 1821 aa16.08■□□□□ 0.16
PTPN7-218ENST00000496197 SLC27A2O14975 620 aa16.07■□□□□ 0.16
PTPN7-218ENST00000496197 REC8O95072 547 aa16.07■□□□□ 0.16
PTPN7-218ENST00000496197 HLA-DOAP06340 250 aa16.07■□□□□ 0.16
PTPN7-218ENST00000496197 MAP3K10Q02779 954 aa16.07■□□□□ 0.16
PTPN7-218ENST00000496197 CST9Q5W186 159 aa16.07■□□□□ 0.16
PTPN7-218ENST00000496197 STOX1Q6ZVD7 989 aa16.07■□□□□ 0.16
PTPN7-218ENST00000496197 TTC6Q86TZ1 520 aa16.07■□□□□ 0.16
PTPN7-218ENST00000496197 EHD4Q9H223 541 aa16.07■□□□□ 0.16
PTPN7-218ENST00000496197 SERPINB13Q9UIV8 391 aa16.07■□□□□ 0.16
PTPN7-218ENST00000496197 ANAPC4Q9UJX5 808 aa16.07■□□□□ 0.16
PTPN7-218ENST00000496197 PRDM1O75626 825 aa16.06■□□□□ 0.16
PTPN7-218ENST00000496197 SHMT1P34896 483 aa16.06■□□□□ 0.16
PTPN7-218ENST00000496197 JAG1P78504 1218 aa16.06■□□□□ 0.16
PTPN7-218ENST00000496197 CREB3L3Q68CJ9 461 aa16.06■□□□□ 0.16
PTPN7-218ENST00000496197 C16orf86Q6ZW13 317 aa16.06■□□□□ 0.16
PTPN7-218ENST00000496197 RASEFQ8IZ41 740 aa16.06■□□□□ 0.16
PTPN7-218ENST00000496197 NEDD4P46934 1319 aa16.05■□□□□ 0.16
PTPN7-218ENST00000496197 PHF20L1A8MW92 1017 aa16.05■□□□□ 0.16
PTPN7-218ENST00000496197 ZNF213O14771 459 aa16.05■□□□□ 0.16
PTPN7-218ENST00000496197 USP2O75604 605 aaPredicted RBP16.05■□□□□ 0.16
PTPN7-218ENST00000496197 HSPA4P34932 840 aa16.05■□□□□ 0.16
PTPN7-218ENST00000496197 CDK8P49336 464 aa16.05■□□□□ 0.16
PTPN7-218ENST00000496197 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.05■□□□□ 0.16
PTPN7-218ENST00000496197 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.05■□□□□ 0.16
PTPN7-218ENST00000496197 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.05■□□□□ 0.16
PTPN7-218ENST00000496197 TBC1D12O60347 775 aa16.04■□□□□ 0.16
PTPN7-218ENST00000496197 CELF2O95319 508 aaKnown RBP16.04■□□□□ 0.16
PTPN7-218ENST00000496197 IMMTQ16891 758 aaKnown RBP16.04■□□□□ 0.16
PTPN7-218ENST00000496197 SUPT20HL1Q3ZLR7 823 aa16.04■□□□□ 0.16
PTPN7-218ENST00000496197 TATDN1Q6P1N9 297 aa16.04■□□□□ 0.16
PTPN7-218ENST00000496197 FOXP4Q8IVH2 680 aaPredicted RBP16.04■□□□□ 0.16
PTPN7-218ENST00000496197 CRACR2BQ8N4Y2 399 aaPredicted RBP16.04■□□□□ 0.16
PTPN7-218ENST00000496197 CTNNA3Q9UI47 895 aa16.04■□□□□ 0.16
PTPN7-218ENST00000496197 HERC5Q9UII4 1024 aaKnown RBP16.04■□□□□ 0.16
PTPN7-218ENST00000496197 INPP5BP32019 993 aa16.03■□□□□ 0.16
PTPN7-218ENST00000496197 AMOTL1Q8IY63 956 aa16.03■□□□□ 0.16
PTPN7-218ENST00000496197 STAG1Q8WVM7 1258 aa16.03■□□□□ 0.16
PTPN7-218ENST00000496197 KCNB2Q92953 911 aa16.03■□□□□ 0.16
PTPN7-218ENST00000496197 KLRG1Q96E93 195 aa16.03■□□□□ 0.16
PTPN7-218ENST00000496197 GDF11O95390 407 aa16.03■□□□□ 0.16
PTPN7-218ENST00000496197 FGRP09769 529 aa16.03■□□□□ 0.16
PTPN7-218ENST00000496197 RASA1P20936 1047 aa16.03■□□□□ 0.16
PTPN7-218ENST00000496197 ADCK5Q3MIX3 580 aa16.03■□□□□ 0.16
PTPN7-218ENST00000496197 AKNAD1Q5T1N1 836 aa16.03■□□□□ 0.16
PTPN7-218ENST00000496197 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.03■□□□□ 0.16
PTPN7-218ENST00000496197 ZNF112Q9UJU3 913 aa16.03■□□□□ 0.16
PTPN7-218ENST00000496197 ANGEL1Q9UNK9 670 aaKnown RBP16.03■□□□□ 0.16
PTPN7-218ENST00000496197 SNX14Q9Y5W7 946 aa16.03■□□□□ 0.16
PTPN7-218ENST00000496197 MYH4Q9Y623 1939 aa16.02■□□□□ 0.15
PTPN7-218ENST00000496197 E7EWF7 191 aa16.02■□□□□ 0.15
PTPN7-218ENST00000496197 EPB41L2O43491 1005 aaKnown RBP16.02■□□□□ 0.15
PTPN7-218ENST00000496197 AKR1B1P15121 316 aa16.02■□□□□ 0.15
PTPN7-218ENST00000496197 FSTL1Q12841 308 aa16.02■□□□□ 0.15
PTPN7-218ENST00000496197 DCAF15Q66K64 600 aa16.02■□□□□ 0.15
PTPN7-218ENST00000496197 ZKSCAN4Q969J2 545 aaPredicted RBP16.02■□□□□ 0.15
PTPN7-218ENST00000496197 WRNIP1Q96S55 665 aa16.02■□□□□ 0.15
PTPN7-218ENST00000496197 ZNF341Q9BYN7 854 aa16.02■□□□□ 0.15
PTPN7-218ENST00000496197 PTPRFP10586 1907 aa16.01■□□□□ 0.15
PTPN7-218ENST00000496197 UBE2Q2LH0YL09 131 aa16.01■□□□□ 0.15
PTPN7-218ENST00000496197 NF2P35240 595 aa16.01■□□□□ 0.15
PTPN7-218ENST00000496197 MAP3K11Q16584 847 aa16.01■□□□□ 0.15
PTPN7-218ENST00000496197 FAM47AQ5JRC9 791 aa16.01■□□□□ 0.15
PTPN7-218ENST00000496197 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.01■□□□□ 0.15
PTPN7-218ENST00000496197 CCDC84Q86UT8 332 aaPredicted RBP16.01■□□□□ 0.15
PTPN7-218ENST00000496197 CLMNQ96JQ2 1002 aa16.01■□□□□ 0.15
PTPN7-218ENST00000496197 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.01■□□□□ 0.15
PTPN7-218ENST00000496197 GBA2Q9HCG7 927 aaPredicted RBP16.01■□□□□ 0.15
PTPN7-218ENST00000496197 SWAP70Q9UH65 585 aa16.01■□□□□ 0.15
PTPN7-218ENST00000496197 B4E1Z4 1266 aa16■□□□□ 0.15
PTPN7-218ENST00000496197 GUCY1A2P33402 732 aa16■□□□□ 0.15
PTPN7-218ENST00000496197 TTLL12Q14166 644 aaPredicted RBP16■□□□□ 0.15
PTPN7-218ENST00000496197 RRP12Q5JTH9 1297 aaKnown RBP16■□□□□ 0.15
PTPN7-218ENST00000496197 MFSD6Q6ZSS7 791 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms