RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 PRMT2P55345 433 aa15.53■□□□□ 0.08
PTPRF-214ENST00000496043 PDE3AQ14432 1141 aa15.53■□□□□ 0.08
PTPRF-214ENST00000496043 ADGRA1Q86SQ6 560 aa15.53■□□□□ 0.08
PTPRF-214ENST00000496043 CERS3Q8IU89 383 aa15.53■□□□□ 0.08
PTPRF-214ENST00000496043 MAPKAPK5Q8IW41 473 aa15.53■□□□□ 0.08
PTPRF-214ENST00000496043 SIRT2Q8IXJ6 389 aa15.53■□□□□ 0.08
PTPRF-214ENST00000496043 ARMC5Q96C12 935 aa15.53■□□□□ 0.08
PTPRF-214ENST00000496043 PARK7Q99497 189 aaKnown RBP15.53■□□□□ 0.08
PTPRF-214ENST00000496043 TBC1D2Q9BYX2 928 aa15.53■□□□□ 0.08
PTPRF-214ENST00000496043 SLC45A1Q9Y2W3 748 aa15.53■□□□□ 0.08
PTPRF-214ENST00000496043 TRIM75PA6NK02 468 aa15.52■□□□□ 0.08
PTPRF-214ENST00000496043 IFIT2P09913 472 aaKnown RBP15.52■□□□□ 0.08
PTPRF-214ENST00000496043 DYNLL1P63167 89 aaKnown RBP15.52■□□□□ 0.08
PTPRF-214ENST00000496043 TTF1Q15361 905 aaPredicted RBP15.52■□□□□ 0.08
PTPRF-214ENST00000496043 MAGEB6Q8N7X4 407 aa15.52■□□□□ 0.08
PTPRF-214ENST00000496043 TRIM34Q9BYJ4 488 aa15.52■□□□□ 0.08
PTPRF-214ENST00000496043 ARHGAP39Q9C0H5 1083 aa15.52■□□□□ 0.08
PTPRF-214ENST00000496043 ANTXR1Q9H6X2 564 aa15.52■□□□□ 0.08
PTPRF-214ENST00000496043 PTCH2Q9Y6C5 1203 aa15.52■□□□□ 0.08
PTPRF-214ENST00000496043 COL2A1P02458 1487 aaPredicted RBP15.52■□□□□ 0.07
PTPRF-214ENST00000496043 USP17L5A8MUK1 530 aa15.51■□□□□ 0.07
PTPRF-214ENST00000496043 FMNL1O95466 1100 aaPredicted RBP15.51■□□□□ 0.07
PTPRF-214ENST00000496043 CYP2C8P10632 490 aa15.51■□□□□ 0.07
PTPRF-214ENST00000496043 PSMC4P43686 418 aa15.51■□□□□ 0.07
PTPRF-214ENST00000496043 SPP2Q13103 211 aa15.51■□□□□ 0.07
PTPRF-214ENST00000496043 SLC9C1Q4G0N8 1177 aa15.51■□□□□ 0.07
PTPRF-214ENST00000496043 ZNF280CQ8ND82 737 aa15.51■□□□□ 0.07
PTPRF-214ENST00000496043 TMEM106CQ9BVX2 250 aa15.51■□□□□ 0.07
PTPRF-214ENST00000496043 PALD1Q9ULE6 856 aa15.51■□□□□ 0.07
PTPRF-214ENST00000496043 NDUFB9Q9Y6M9 179 aa15.51■□□□□ 0.07
PTPRF-214ENST00000496043 FLT1P17948 1338 aa15.5■□□□□ 0.07
PTPRF-214ENST00000496043 ECM2O94769 699 aaPredicted RBP15.5■□□□□ 0.07
PTPRF-214ENST00000496043 HLA-DOAP06340 250 aa15.5■□□□□ 0.07
PTPRF-214ENST00000496043 USP5P45974 858 aa15.5■□□□□ 0.07
PTPRF-214ENST00000496043 RRP1BQ14684 758 aaKnown RBP15.5■□□□□ 0.07
PTPRF-214ENST00000496043 CCDC84Q86UT8 332 aaPredicted RBP15.5■□□□□ 0.07
PTPRF-214ENST00000496043 METTL16Q86W50 562 aaKnown RBP15.5■□□□□ 0.07
PTPRF-214ENST00000496043 CRACR2BQ8N4Y2 399 aaPredicted RBP15.5■□□□□ 0.07
PTPRF-214ENST00000496043 MIGA1Q8NAN2 632 aa15.5■□□□□ 0.07
PTPRF-214ENST00000496043 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.5■□□□□ 0.07
PTPRF-214ENST00000496043 BCL11AQ9H165 835 aa15.5■□□□□ 0.07
PTPRF-214ENST00000496043 AS3MTQ9HBK9 375 aa15.5■□□□□ 0.07
PTPRF-214ENST00000496043 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.5■□□□□ 0.07
PTPRF-214ENST00000496043 ADGRA2Q96PE1 1338 aa15.49■□□□□ 0.07
PTPRF-214ENST00000496043 BCRP11274 1271 aa15.49■□□□□ 0.07
PTPRF-214ENST00000496043 C20orf194Q5TEA3 1177 aa15.49■□□□□ 0.07
PTPRF-214ENST00000496043 PROCA1Q8NCQ7 364 aaPredicted RBP15.49■□□□□ 0.07
PTPRF-214ENST00000496043 TRIM47Q96LD4 638 aa15.49■□□□□ 0.07
PTPRF-214ENST00000496043 GINM1Q9NU53 330 aa15.49■□□□□ 0.07
PTPRF-214ENST00000496043 SRRDQ9UH36 339 aa15.49■□□□□ 0.07
PTPRF-214ENST00000496043 SAP30BPQ9UHR5 308 aaKnown RBP15.49■□□□□ 0.07
PTPRF-214ENST00000496043 AGTPBP1Q9UPW5 1226 aa15.49■□□□□ 0.07
PTPRF-214ENST00000496043 POTEFA5A3E0 1075 aa15.48■□□□□ 0.07
PTPRF-214ENST00000496043 ASNSP08243 561 aa15.48■□□□□ 0.07
PTPRF-214ENST00000496043 FCGRTP55899 365 aa15.48■□□□□ 0.07
PTPRF-214ENST00000496043 PABPC4Q13310 644 aaKnown RBP eCLIP15.48■□□□□ 0.07
PTPRF-214ENST00000496043 SLC9C2Q5TAH2 1124 aa15.48■□□□□ 0.07
PTPRF-214ENST00000496043 SMCR8Q8TEV9 937 aaPredicted RBP15.48■□□□□ 0.07
PTPRF-214ENST00000496043 ZNF333Q96JL9 665 aa15.48■□□□□ 0.07
PTPRF-214ENST00000496043 WDR18Q9BV38 432 aa15.48■□□□□ 0.07
PTPRF-214ENST00000496043 PNMA3Q9UL41 463 aa15.48■□□□□ 0.07
PTPRF-214ENST00000496043 DOCK2Q92608 1830 aa15.47■□□□□ 0.07
PTPRF-214ENST00000496043 OSBPP22059 807 aa15.47■□□□□ 0.07
PTPRF-214ENST00000496043 CTGFP29279 349 aa15.47■□□□□ 0.07
PTPRF-214ENST00000496043 SLC4A8Q2Y0W8 1093 aa15.47■□□□□ 0.07
PTPRF-214ENST00000496043 SH3D19Q5HYK7 790 aa15.47■□□□□ 0.07
PTPRF-214ENST00000496043 TTC6Q86TZ1 520 aa15.47■□□□□ 0.07
PTPRF-214ENST00000496043 RAET1EQ8TD07 263 aa15.47■□□□□ 0.07
PTPRF-214ENST00000496043 DNAJC2Q99543 621 aaKnown RBP15.47■□□□□ 0.07
PTPRF-214ENST00000496043 MAGEB6P1A0A0J9YX57 407 aa15.46■□□□□ 0.07
PTPRF-214ENST00000496043 GOLIM4O00461 696 aa15.46■□□□□ 0.07
PTPRF-214ENST00000496043 HMGCS2P54868 508 aa15.46■□□□□ 0.07
PTPRF-214ENST00000496043 TREML2Q5T2D2 321 aa15.46■□□□□ 0.07
PTPRF-214ENST00000496043 SH3TC2Q8TF17 1288 aa15.46■□□□□ 0.07
PTPRF-214ENST00000496043 C19orf81C9J6K1 198 aa15.45■□□□□ 0.06
PTPRF-214ENST00000496043 PDE6AP16499 860 aa15.45■□□□□ 0.06
PTPRF-214ENST00000496043 ATP5JP18859 108 aa15.45■□□□□ 0.06
PTPRF-214ENST00000496043 EN2P19622 333 aaPredicted RBP15.45■□□□□ 0.06
PTPRF-214ENST00000496043 BACE1P56817 501 aa15.45■□□□□ 0.06
PTPRF-214ENST00000496043 JAG1P78504 1218 aa15.45■□□□□ 0.06
PTPRF-214ENST00000496043 RIOK1Q9BRS2 568 aaKnown RBP15.45■□□□□ 0.06
PTPRF-214ENST00000496043 LRRCC1Q9C099 1032 aa15.45■□□□□ 0.06
PTPRF-214ENST00000496043 BOLA2Q9H3K6 86 aa15.45■□□□□ 0.06
PTPRF-214ENST00000496043 DNAJC18Q9H819 358 aa15.45■□□□□ 0.06
PTPRF-214ENST00000496043 TMOD4Q9NZQ9 345 aa15.45■□□□□ 0.06
PTPRF-214ENST00000496043 MYPNQ86TC9 1320 aa15.44■□□□□ 0.06
PTPRF-214ENST00000496043 USP17L10C9JJH3 530 aa15.44■□□□□ 0.06
PTPRF-214ENST00000496043 GDF11O95390 407 aa15.44■□□□□ 0.06
PTPRF-214ENST00000496043 POLR3DP05423 398 aaPredicted RBP15.44■□□□□ 0.06
PTPRF-214ENST00000496043 GRK4P32298 578 aa15.44■□□□□ 0.06
PTPRF-214ENST00000496043 GCLCP48506 637 aaPredicted RBP15.44■□□□□ 0.06
PTPRF-214ENST00000496043 CRNKL1Q9BZJ0 848 aaKnown RBP15.44■□□□□ 0.06
PTPRF-214ENST00000496043 EHD4Q9H223 541 aa15.44■□□□□ 0.06
PTPRF-214ENST00000496043 PAG1Q9NWQ8 432 aa15.44■□□□□ 0.06
PTPRF-214ENST00000496043 SERPINB13Q9UIV8 391 aa15.44■□□□□ 0.06
PTPRF-214ENST00000496043 ZNF532Q9HCE3 1301 aa15.43■□□□□ 0.06
PTPRF-214ENST00000496043 MYCP01106 439 aaPredicted RBP15.43■□□□□ 0.06
PTPRF-214ENST00000496043 MTMR2Q13614 643 aa15.43■□□□□ 0.06
PTPRF-214ENST00000496043 TATDN1Q6P1N9 297 aa15.43■□□□□ 0.06
PTPRF-214ENST00000496043 ANKRD13CQ8N6S4 541 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms