RNA–Protein interactions for RNA: ENST00000495726.1

NUP188-210, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 516 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-210ENST00000495726 RNPC3Q96LT9 517 aaKnown RBP5.54□□□□□ -1.52
NUP188-210ENST00000495726 DEPDC7Q96QD5 511 aa5.54□□□□□ -1.52
NUP188-210ENST00000495726 RBSNQ9H1K0 784 aa5.54□□□□□ -1.52
NUP188-210ENST00000495726 BRMS1Q9HCU9 246 aa5.54□□□□□ -1.52
NUP188-210ENST00000495726 CFDP1Q9UEE9 299 aaPredicted RBP5.54□□□□□ -1.52
NUP188-210ENST00000495726 R3HCC1Q9Y3T6 440 aaKnown RBP5.54□□□□□ -1.52
NUP188-210ENST00000495726 YEATS2Q9ULM3 1422 aa5.54□□□□□ -1.52
NUP188-210ENST00000495726 TSPOAP1O95153 1857 aa5.54□□□□□ -1.52
NUP188-210ENST00000495726 ABCC1P33527 1531 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 ARHGEF40Q8TER5 1519 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 NCOA2Q15596 1464 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 HSD3B2P26439 372 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 ADH7P40394 386 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 EIF6P56537 245 aaKnown RBP5.53□□□□□ -1.52
NUP188-210ENST00000495726 CLCQ05315 142 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 CWF19L2Q2TBE0 894 aaKnown RBP5.53□□□□□ -1.52
NUP188-210ENST00000495726 PERM1Q5SV97 790 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 FBXW10Q5XX13 1052 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 FAM35AQ86V20 835 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 CELF2-AS1Q8N7Q2 184 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 GAL3ST3Q96A11 431 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 TRIM11Q96F44 468 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 FERD3LQ96RJ6 166 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 ADAM19Q9H013 955 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 AVENQ9NQS1 362 aaPredicted RBP5.53□□□□□ -1.52
NUP188-210ENST00000495726 NAGPAQ9UK23 515 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 CYP8B1Q9UNU6 501 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 TRIM33Q9UPN9 1127 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 STARD13Q9Y3M8 1113 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 SAMM50Q9Y512 469 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 KIAA1107Q9UPP5 1409 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 MAP3K1Q13233 1512 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 ZFYVE16Q7Z3T8 1539 aa5.53□□□□□ -1.52
NUP188-210ENST00000495726 LRRC9Q6ZRR7 1453 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 PLEKHH2Q8IVE3 1493 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 TIAM1Q13009 1591 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 TRAPPC8Q9Y2L5 1435 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 CCDC85CA6NKD9 419 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 FAM229AH3BQW9 127 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 M0R082 166 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 GNB5O14775 395 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 SIN3BO75182 1162 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 ALBP02768 609 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 ESRRAP11474 423 aaPredicted RBP5.52□□□□□ -1.53
NUP188-210ENST00000495726 ALAS2P22557 587 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 ARNTP27540 789 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 ZNF165P49910 485 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 PTPN11Q06124 597 aaPredicted RBP5.52□□□□□ -1.53
NUP188-210ENST00000495726 PCSK7Q16549 785 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 TNNI3KQ59H18 835 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 LLGL2Q6P1M3 1020 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 MPRIPQ6WCQ1 1025 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 GK5Q6ZS86 529 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 REC114Q7Z4M0 266 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 AFAP1Q8N556 730 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 ZNF417Q8TAU3 575 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 GPATCH3Q96I76 525 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 ZNF587Q96SQ5 575 aaPredicted RBP5.52□□□□□ -1.53
NUP188-210ENST00000495726 SPOCK3Q9BQ16 436 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 PLVAPQ9BX97 442 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 LACRTQ9GZZ8 138 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 SMG9Q9H0W8 520 aaKnown RBP5.52□□□□□ -1.53
NUP188-210ENST00000495726 CBX8Q9HC52 389 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 SH2B1Q9NRF2 756 aaPredicted RBP5.52□□□□□ -1.53
NUP188-210ENST00000495726 SLC6A14Q9UN76 642 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 MSRB2Q9Y3D2 182 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 ARHGEF12Q9NZN5 1544 aa5.52□□□□□ -1.53
NUP188-210ENST00000495726 MLH3Q9UHC1 1453 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 C9orf84Q5VXU9 1444 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 ENPP3O14638 875 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 MSTNO14793 375 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 PTPRAP18433 802 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 ZNF252P-AS1Q0IIN9 211 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 SUZ12Q15022 739 aaKnown RBP5.51□□□□□ -1.53
NUP188-210ENST00000495726 LRRC14Q15048 493 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 LRP10Q7Z4F1 713 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 MICALL1Q8N3F8 863 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 NUDT8Q8WV74 236 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 TNFRSF25Q93038 417 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 CRBNQ96SW2 442 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 MDFIQ99750 246 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 LPIN3Q9BQK8 851 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 KANSL2Q9H9L4 492 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 ST7Q9NRC1 585 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 ACTR10Q9NZ32 417 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 ZNRF3Q9ULT6 936 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 POLR3KQ9Y2Y1 108 aaPredicted RBP5.51□□□□□ -1.53
NUP188-210ENST00000495726 PREX2Q70Z35 1606 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 LMTK3Q96Q04 1460 aa5.51□□□□□ -1.53
NUP188-210ENST00000495726 KDM5CP41229 1560 aa5.5□□□□□ -1.53
NUP188-210ENST00000495726 ARID4BQ4LE39 1312 aaPredicted RBP5.5□□□□□ -1.53
NUP188-210ENST00000495726 SYCP2Q9BX26 1530 aa5.5□□□□□ -1.53
NUP188-210ENST00000495726 BPNT1O95861 308 aa5.5□□□□□ -1.53
NUP188-210ENST00000495726 DDR2Q16832 855 aa5.5□□□□□ -1.53
NUP188-210ENST00000495726 ELMSAN1Q6PJG2 1045 aa5.5□□□□□ -1.53
NUP188-210ENST00000495726 PDZD3Q86UT5 571 aa5.5□□□□□ -1.53
NUP188-210ENST00000495726 LSRQ86X29 649 aaPredicted RBP5.5□□□□□ -1.53
NUP188-210ENST00000495726 REXO1Q8N1G1 1221 aaKnown RBP5.5□□□□□ -1.53
NUP188-210ENST00000495726 EMILIN2Q9BXX0 1053 aa5.5□□□□□ -1.53
NUP188-210ENST00000495726 CCDC113Q9H0I3 377 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms