RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 TAOK2Q9UL54 1235 aa16.75■□□□□ 0.27
COL1A1-209ENST00000495677 XRCC5P13010 732 aaKnown RBP16.74■□□□□ 0.27
COL1A1-209ENST00000495677 PHKA1P46020 1223 aa16.74■□□□□ 0.27
COL1A1-209ENST00000495677 Q7L0L9 218 aa16.74■□□□□ 0.27
COL1A1-209ENST00000495677 ZNF280CQ8ND82 737 aa16.74■□□□□ 0.27
COL1A1-209ENST00000495677 COL2A1P02458 1487 aaPredicted RBP16.73■□□□□ 0.27
COL1A1-209ENST00000495677 GPR75-ASB3A0A0A6YYF3 556 aa16.73■□□□□ 0.27
COL1A1-209ENST00000495677 SLURP2P0DP57 97 aa16.73■□□□□ 0.27
COL1A1-209ENST00000495677 RHBDL3P58872 404 aa16.73■□□□□ 0.27
COL1A1-209ENST00000495677 SPP2Q13103 211 aa16.73■□□□□ 0.27
COL1A1-209ENST00000495677 SPTY2D1Q68D10 685 aaPredicted RBP16.73■□□□□ 0.27
COL1A1-209ENST00000495677 CCDC102BQ68D86 513 aa16.73■□□□□ 0.27
COL1A1-209ENST00000495677 FAM109BQ6ICB4 259 aaPredicted RBP16.73■□□□□ 0.27
COL1A1-209ENST00000495677 MRS2Q9HD23 443 aa16.73■□□□□ 0.27
COL1A1-209ENST00000495677 CDK5RAP2Q96SN8 1893 aa16.72■□□□□ 0.27
COL1A1-209ENST00000495677 POTEB2H3BUK9 544 aa16.72■□□□□ 0.27
COL1A1-209ENST00000495677 COL6A1P12109 1028 aa16.72■□□□□ 0.27
COL1A1-209ENST00000495677 SYN1P17600 705 aa16.72■□□□□ 0.27
COL1A1-209ENST00000495677 IL15P40933 162 aaPredicted RBP16.72■□□□□ 0.27
COL1A1-209ENST00000495677 TRIM32Q13049 653 aa16.72■□□□□ 0.27
COL1A1-209ENST00000495677 TRMT44Q8IYL2 757 aaKnown RBP16.72■□□□□ 0.27
COL1A1-209ENST00000495677 TRIB2Q92519 343 aa16.72■□□□□ 0.27
COL1A1-209ENST00000495677 UBE2OQ9C0C9 1292 aaKnown RBP16.72■□□□□ 0.27
COL1A1-209ENST00000495677 ASCC2Q9H1I8 757 aaPredicted RBP16.72■□□□□ 0.27
COL1A1-209ENST00000495677 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.72■□□□□ 0.27
COL1A1-209ENST00000495677 MROH7-TTC4A0A0A0MT08 1334 aa16.71■□□□□ 0.27
COL1A1-209ENST00000495677 PFASO15067 1338 aa16.71■□□□□ 0.27
COL1A1-209ENST00000495677 HOXA7P31268 230 aaPredicted RBP16.71■□□□□ 0.27
COL1A1-209ENST00000495677 CAP2P40123 477 aa16.71■□□□□ 0.27
COL1A1-209ENST00000495677 BTDP43251 543 aa16.71■□□□□ 0.27
COL1A1-209ENST00000495677 CCDC84Q86UT8 332 aaPredicted RBP16.71■□□□□ 0.27
COL1A1-209ENST00000495677 DZIP1Q86YF9 867 aaKnown RBP16.71■□□□□ 0.27
COL1A1-209ENST00000495677 COL25A1Q9BXS0 654 aaPredicted RBP16.71■□□□□ 0.27
COL1A1-209ENST00000495677 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.71■□□□□ 0.27
COL1A1-209ENST00000495677 FOCADQ5VW36 1801 aa16.7■□□□□ 0.26
COL1A1-209ENST00000495677 DNAH12Q6ZR08 3092 aa16.7■□□□□ 0.26
COL1A1-209ENST00000495677 USP17L5A8MUK1 530 aa16.7■□□□□ 0.26
COL1A1-209ENST00000495677 PICALMQ13492 652 aa16.7■□□□□ 0.26
COL1A1-209ENST00000495677 NUDT12Q9BQG2 462 aa16.7■□□□□ 0.26
COL1A1-209ENST00000495677 ABCF2Q9UG63 623 aa16.7■□□□□ 0.26
COL1A1-209ENST00000495677 SIPA1L1O43166 1804 aa16.7■□□□□ 0.26
COL1A1-209ENST00000495677 ZNF521Q96K83 1311 aa16.7■□□□□ 0.26
COL1A1-209ENST00000495677 HMGCS2P54868 508 aa16.69■□□□□ 0.26
COL1A1-209ENST00000495677 RASGRF1Q13972 1273 aa16.69■□□□□ 0.26
COL1A1-209ENST00000495677 SOCS4Q8WXH5 440 aa16.69■□□□□ 0.26
COL1A1-209ENST00000495677 WDR18Q9BV38 432 aa16.69■□□□□ 0.26
COL1A1-209ENST00000495677 SIL1Q9H173 461 aa16.69■□□□□ 0.26
COL1A1-209ENST00000495677 AS3MTQ9HBK9 375 aa16.69■□□□□ 0.26
COL1A1-209ENST00000495677 COPRSQ9NQ92 184 aa16.69■□□□□ 0.26
COL1A1-209ENST00000495677 HERC5Q9UII4 1024 aaKnown RBP16.69■□□□□ 0.26
COL1A1-209ENST00000495677 HDAC5Q9UQL6 1122 aa16.69■□□□□ 0.26
COL1A1-209ENST00000495677 MAST2Q6P0Q8 1798 aa16.69■□□□□ 0.26
COL1A1-209ENST00000495677 LAMA2P24043 3122 aaKnown RBP16.68■□□□□ 0.26
COL1A1-209ENST00000495677 LDHCP07864 332 aa16.68■□□□□ 0.26
COL1A1-209ENST00000495677 LHX8Q68G74 356 aa16.68■□□□□ 0.26
COL1A1-209ENST00000495677 ERICH6Q7L0X2 663 aa16.68■□□□□ 0.26
COL1A1-209ENST00000495677 ZNF384Q8TF68 577 aa16.68■□□□□ 0.26
COL1A1-209ENST00000495677 USP6NLQ92738 828 aa16.68■□□□□ 0.26
COL1A1-209ENST00000495677 C19orf81C9J6K1 198 aa16.67■□□□□ 0.26
COL1A1-209ENST00000495677 PRKAR2AP13861 404 aaKnown RBP16.67■□□□□ 0.26
COL1A1-209ENST00000495677 CYP2B6P20813 491 aa16.67■□□□□ 0.26
COL1A1-209ENST00000495677 ADORA1P30542 326 aa16.67■□□□□ 0.26
COL1A1-209ENST00000495677 BACE1P56817 501 aa16.67■□□□□ 0.26
COL1A1-209ENST00000495677 MECOMQ03112 1051 aa16.67■□□□□ 0.26
COL1A1-209ENST00000495677 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.67■□□□□ 0.26
COL1A1-209ENST00000495677 SSH1Q8WYL5 1049 aa16.67■□□□□ 0.26
COL1A1-209ENST00000495677 RLFQ13129 1914 aa16.66■□□□□ 0.26
COL1A1-209ENST00000495677 UBTFL1P0CB47 393 aaPredicted RBP16.66■□□□□ 0.26
COL1A1-209ENST00000495677 MAPK4P31152 587 aa16.66■□□□□ 0.26
COL1A1-209ENST00000495677 TIMM10P62072 90 aa16.66■□□□□ 0.26
COL1A1-209ENST00000495677 CACNB2Q08289 660 aaPredicted RBP16.66■□□□□ 0.26
COL1A1-209ENST00000495677 RRP1BQ14684 758 aaKnown RBP16.66■□□□□ 0.26
COL1A1-209ENST00000495677 ALDH1L2Q3SY69 923 aa16.66■□□□□ 0.26
COL1A1-209ENST00000495677 GPRC5AQ8NFJ5 357 aa16.66■□□□□ 0.26
COL1A1-209ENST00000495677 P2RX7Q99572 595 aaKnown RBP16.66■□□□□ 0.26
COL1A1-209ENST00000495677 GINM1Q9NU53 330 aa16.66■□□□□ 0.26
COL1A1-209ENST00000495677 FAM196BA6NMK8 535 aa16.65■□□□□ 0.26
COL1A1-209ENST00000495677 IRX3P78415 501 aaPredicted RBP16.65■□□□□ 0.26
COL1A1-209ENST00000495677 GSTO1P78417 241 aa16.65■□□□□ 0.26
COL1A1-209ENST00000495677 LRRC26Q2I0M4 334 aa16.65■□□□□ 0.26
COL1A1-209ENST00000495677 GTF3C2Q8WUA4 911 aaPredicted RBP16.65■□□□□ 0.26
COL1A1-209ENST00000495677 NSUN4Q96CB9 384 aaKnown RBP16.65■□□□□ 0.26
COL1A1-209ENST00000495677 DHX36Q9H2U1 1008 aaKnown RBP16.65■□□□□ 0.26
COL1A1-209ENST00000495677 PI4KBQ9UBF8 816 aa16.65■□□□□ 0.26
COL1A1-209ENST00000495677 RBPJLQ9UBG7 517 aa16.65■□□□□ 0.26
COL1A1-209ENST00000495677 AKAP2Q9Y2D5 859 aa16.65■□□□□ 0.26
COL1A1-209ENST00000495677 LTBP2Q14767 1821 aa16.65■□□□□ 0.26
COL1A1-209ENST00000495677 MYO5AQ9Y4I1 1855 aaKnown RBP16.65■□□□□ 0.26
COL1A1-209ENST00000495677 ASNSP08243 561 aa16.64■□□□□ 0.25
COL1A1-209ENST00000495677 HERVK_113P62684 666 aa16.64■□□□□ 0.25
COL1A1-209ENST00000495677 Q3C1V9 767 aa16.64■□□□□ 0.25
COL1A1-209ENST00000495677 MORN1Q5T089 497 aa16.64■□□□□ 0.25
COL1A1-209ENST00000495677 METTL16Q86W50 562 aaKnown RBP16.64■□□□□ 0.25
COL1A1-209ENST00000495677 XAGE2Q96GT9 111 aa16.64■□□□□ 0.25
COL1A1-209ENST00000495677 GUCD1Q96NT3 240 aa16.64■□□□□ 0.25
COL1A1-209ENST00000495677 TXNRD2Q9NNW7 524 aa16.64■□□□□ 0.25
COL1A1-209ENST00000495677 A0A1B0GUL7 405 aa16.63■□□□□ 0.25
COL1A1-209ENST00000495677 ZKSCAN1P17029 563 aaPredicted RBP16.63■□□□□ 0.25
COL1A1-209ENST00000495677 RGS2P41220 211 aa16.63■□□□□ 0.25
COL1A1-209ENST00000495677 PDE3AQ14432 1141 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms