RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	SWAP70	Q9UH65	585 aa		10.89	□□□□□ -0.67
PCDH15-223	ENST00000495484	PCDHAC2	Q9Y5I4	1007 aa		10.89	□□□□□ -0.67
PCDH15-223	ENST00000495484	NEDD4	P46934	1319 aa		10.88	□□□□□ -0.67
PCDH15-223	ENST00000495484	ERICH2	A1L162	156 aa		10.88	□□□□□ -0.67
PCDH15-223	ENST00000495484	KDM4A	O75164	1064 aa		10.88	□□□□□ -0.67
PCDH15-223	ENST00000495484	CYP2D6	P10635	497 aa		10.88	□□□□□ -0.67
PCDH15-223	ENST00000495484	PLCD1	P51178	756 aa		10.88	□□□□□ -0.67
PCDH15-223	ENST00000495484	KIF4B	Q2VIQ3	1234 aa		10.88	□□□□□ -0.67
PCDH15-223	ENST00000495484	RRP12	Q5JTH9	1297 aa	Known RBP	10.88	□□□□□ -0.67
PCDH15-223	ENST00000495484		Q6ZUG5	572 aa		10.88	□□□□□ -0.67
PCDH15-223	ENST00000495484	IQCA1	Q86XH1	822 aa		10.88	□□□□□ -0.67
PCDH15-223	ENST00000495484	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.88	□□□□□ -0.67
PCDH15-223	ENST00000495484	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.88	□□□□□ -0.67
PCDH15-223	ENST00000495484	FAM151A	Q8WW52	585 aa		10.88	□□□□□ -0.67
PCDH15-223	ENST00000495484	SERPINB13	Q9UIV8	391 aa		10.88	□□□□□ -0.67
PCDH15-223	ENST00000495484	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
PCDH15-223	ENST00000495484	PSME4	Q14997	1843 aa		10.88	□□□□□ -0.67
PCDH15-223	ENST00000495484	RANBP6	O60518	1105 aa	Known RBP	10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	CD2BP2	O95400	341 aa	Known RBP	10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	HSP90AA1	P07900	732 aa	Known RBP	10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	TCP10	Q12799	353 aa		10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	RBM26	Q5T8P6	1007 aa	Known RBP	10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	UBAC1	Q9BSL1	405 aa		10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	COL2A1	P02458	1487 aa	Predicted RBP	10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	CLRN2	A0PK11	232 aa		10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	TCP10L2	B9ZVM9	353 aa		10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	DDN	O94850	711 aa	Predicted RBP	10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	CDK8	P49336	464 aa		10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	CACNB3	P54284	484 aa		10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	NBPF9	Q3BBW0	867 aa		10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	SAMD7	Q7Z3H4	446 aa		10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	STK11IP	Q8N1F8	1099 aa		10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	TMX3	Q96JJ7	454 aa		10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	TRIM34	Q9BYJ4	488 aa		10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	VEZT	Q9HBM0	779 aa		10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	ADARB2	Q9NS39	739 aa	Known RBP	10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	ANGEL1	Q9UNK9	670 aa	Known RBP	10.87	□□□□□ -0.67
PCDH15-223	ENST00000495484	ATRNL1	Q5VV63	1379 aa		10.86	□□□□□ -0.67
PCDH15-223	ENST00000495484	ZNF646	O15015	1829 aa	Predicted RBP	10.86	□□□□□ -0.67
PCDH15-223	ENST00000495484	GLTPD2	A6NH11	291 aa		10.86	□□□□□ -0.67
PCDH15-223	ENST00000495484	TSPY2	A6NKD2	308 aa		10.86	□□□□□ -0.67
PCDH15-223	ENST00000495484	IFIT3	O14879	490 aa	Known RBP	10.86	□□□□□ -0.67
PCDH15-223	ENST00000495484	LIFR	P42702	1097 aa		10.86	□□□□□ -0.67
PCDH15-223	ENST00000495484	GABPA	Q06546	454 aa		10.86	□□□□□ -0.67
PCDH15-223	ENST00000495484	TOB2	Q14106	344 aa	Predicted RBP	10.86	□□□□□ -0.67
PCDH15-223	ENST00000495484	SLC4A8	Q2Y0W8	1093 aa		10.86	□□□□□ -0.67
PCDH15-223	ENST00000495484	CYB5R4	Q7L1T6	521 aa		10.86	□□□□□ -0.67
PCDH15-223	ENST00000495484	CHST3	Q7LGC8	479 aa		10.86	□□□□□ -0.67
PCDH15-223	ENST00000495484	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.86	□□□□□ -0.67
PCDH15-223	ENST00000495484	BRF1	Q92994	677 aa		10.86	□□□□□ -0.67
PCDH15-223	ENST00000495484	DYNLL2	Q96FJ2	89 aa		10.86	□□□□□ -0.67
PCDH15-223	ENST00000495484	TCEANC2	Q96MN5	208 aa		10.86	□□□□□ -0.67
PCDH15-223	ENST00000495484	INCENP	Q9NQS7	918 aa		10.86	□□□□□ -0.67
PCDH15-223	ENST00000495484	SHTN1	A0MZ66	631 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	PRDM1	O75626	825 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	EVC	P57679	992 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	ANTXR2	P58335	489 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	TMEM67	Q5HYA8	995 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	SYNE3	Q6ZMZ3	975 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	METTL16	Q86W50	562 aa	Known RBP	10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	ZFPM1	Q8IX07	1006 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	IGDCC4	Q8TDY8	1250 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	ZNF274	Q96GC6	653 aa	Predicted RBP	10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	INTS4	Q96HW7	963 aa	Known RBP	10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	CCDC17	Q96LX7	622 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	TCP11L1	Q9NUJ3	509 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	HERC5	Q9UII4	1024 aa	Known RBP	10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	TACC3	Q9Y6A5	838 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	TIAM2	Q8IVF5	1701 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	IQCA1L	A6NCM1	817 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	DDTL	A6NHG4	134 aa	Predicted RBP	10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	SH2B2	O14492	632 aa	Predicted RBP	10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	TSPY3	P0CV98	308 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	TSPY8	P0CW00	308 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	EPS15	P42566	896 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	TFAP4	Q01664	338 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	PPP4R3B	Q5MIZ7	849 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	NOL8	Q76FK4	1167 aa	Known RBP	10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	SGMS1	Q86VZ5	419 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	HOOK2	Q96ED9	719 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	CSRNP1	Q96S65	589 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	LRRC2	Q9BYS8	371 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	HACL1	Q9UJ83	578 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	TPCN1	Q9ULQ1	816 aa		10.85	□□□□□ -0.67
PCDH15-223	ENST00000495484	CCDC69	A6NI79	296 aa		10.84	□□□□□ -0.67
PCDH15-223	ENST00000495484	SMIM22	K7EJ46	135 aa		10.84	□□□□□ -0.67
PCDH15-223	ENST00000495484	DHX16	O60231	1041 aa	Known RBP	10.84	□□□□□ -0.67
PCDH15-223	ENST00000495484	TBC1D12	O60347	775 aa		10.84	□□□□□ -0.67
PCDH15-223	ENST00000495484	RASA1	P20936	1047 aa		10.84	□□□□□ -0.67
PCDH15-223	ENST00000495484	SLC4A3	P48751	1232 aa		10.84	□□□□□ -0.67
PCDH15-223	ENST00000495484	CUL4A	Q13619	759 aa		10.84	□□□□□ -0.67
PCDH15-223	ENST00000495484	COL9A3	Q14050	684 aa	Predicted RBP	10.84	□□□□□ -0.67
PCDH15-223	ENST00000495484	RASA3	Q14644	834 aa		10.84	□□□□□ -0.67
PCDH15-223	ENST00000495484	WTAP	Q15007	396 aa		10.84	□□□□□ -0.67
PCDH15-223	ENST00000495484	NFXL1	Q6ZNB6	911 aa		10.84	□□□□□ -0.67
PCDH15-223	ENST00000495484	USP50	Q70EL3	339 aa	Predicted RBP	10.84	□□□□□ -0.67

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