RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 IGSF3O75054 1194 aa17.37■□□□□ 0.37
RPRD1B-206ENST00000495457 RAB11FIP3O75154 756 aa17.37■□□□□ 0.37
RPRD1B-206ENST00000495457 ECM2O94769 699 aaPredicted RBP17.37■□□□□ 0.37
RPRD1B-206ENST00000495457 IFIT2P09913 472 aaKnown RBP17.37■□□□□ 0.37
RPRD1B-206ENST00000495457 C17orf99Q6UX52 265 aa17.37■□□□□ 0.37
RPRD1B-206ENST00000495457 PRRT2Q7Z6L0 340 aaPredicted RBP17.37■□□□□ 0.37
RPRD1B-206ENST00000495457 PI4KBQ9UBF8 816 aa17.37■□□□□ 0.37
RPRD1B-206ENST00000495457 CPA4Q9UI42 421 aa17.37■□□□□ 0.37
RPRD1B-206ENST00000495457 CYP2C8P10632 490 aa17.36■□□□□ 0.37
RPRD1B-206ENST00000495457 MAP3K12Q12852 859 aa17.36■□□□□ 0.37
RPRD1B-206ENST00000495457 SLC4A8Q2Y0W8 1093 aa17.36■□□□□ 0.37
RPRD1B-206ENST00000495457 DHX36Q9H2U1 1008 aaKnown RBP17.36■□□□□ 0.37
RPRD1B-206ENST00000495457 SAP30BPQ9UHR5 308 aaKnown RBP17.36■□□□□ 0.37
RPRD1B-206ENST00000495457 PALD1Q9ULE6 856 aa17.36■□□□□ 0.37
RPRD1B-206ENST00000495457 ADGRA2Q96PE1 1338 aa17.36■□□□□ 0.37
RPRD1B-206ENST00000495457 MYO5AQ9Y4I1 1855 aaKnown RBP17.35■□□□□ 0.37
RPRD1B-206ENST00000495457 HTTP42858 3142 aa17.35■□□□□ 0.37
RPRD1B-206ENST00000495457 CAP2P40123 477 aa17.35■□□□□ 0.37
RPRD1B-206ENST00000495457 LACTBP83111 547 aaPredicted RBP17.35■□□□□ 0.37
RPRD1B-206ENST00000495457 GADL1Q6ZQY3 521 aa17.35■□□□□ 0.37
RPRD1B-206ENST00000495457 DNAJC2Q99543 621 aaKnown RBP17.35■□□□□ 0.37
RPRD1B-206ENST00000495457 DNAJC18Q9H819 358 aa17.35■□□□□ 0.37
RPRD1B-206ENST00000495457 HERC5Q9UII4 1024 aaKnown RBP17.35■□□□□ 0.37
RPRD1B-206ENST00000495457 GOLIM4O00461 696 aa17.34■□□□□ 0.37
RPRD1B-206ENST00000495457 CTGFP29279 349 aa17.34■□□□□ 0.37
RPRD1B-206ENST00000495457 FASTKD5Q7L8L6 764 aaKnown RBP17.34■□□□□ 0.37
RPRD1B-206ENST00000495457 EDC3Q96F86 508 aaKnown RBP17.34■□□□□ 0.37
RPRD1B-206ENST00000495457 PARK7Q99497 189 aaKnown RBP17.34■□□□□ 0.37
RPRD1B-206ENST00000495457 DOCK1Q14185 1865 aa17.33■□□□□ 0.37
RPRD1B-206ENST00000495457 SMARCA5O60264 1052 aaPredicted RBP17.33■□□□□ 0.36
RPRD1B-206ENST00000495457 JAG1P78504 1218 aa17.33■□□□□ 0.36
RPRD1B-206ENST00000495457 SPP2Q13103 211 aa17.33■□□□□ 0.36
RPRD1B-206ENST00000495457 SHROOM1Q2M3G4 852 aaPredicted RBP17.33■□□□□ 0.36
RPRD1B-206ENST00000495457 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.33■□□□□ 0.36
RPRD1B-206ENST00000495457 PTCH2Q9Y6C5 1203 aa17.33■□□□□ 0.36
RPRD1B-206ENST00000495457 USP5P45974 858 aa17.32■□□□□ 0.36
RPRD1B-206ENST00000495457 KIF22Q14807 665 aa17.32■□□□□ 0.36
RPRD1B-206ENST00000495457 ARHGEF6Q15052 776 aa17.32■□□□□ 0.36
RPRD1B-206ENST00000495457 TTF1Q15361 905 aaPredicted RBP17.32■□□□□ 0.36
RPRD1B-206ENST00000495457 SLC9C2Q5TAH2 1124 aa17.32■□□□□ 0.36
RPRD1B-206ENST00000495457 METTL16Q86W50 562 aaKnown RBP17.32■□□□□ 0.36
RPRD1B-206ENST00000495457 FOXP4Q8IVH2 680 aaPredicted RBP17.32■□□□□ 0.36
RPRD1B-206ENST00000495457 CRACR2BQ8N4Y2 399 aaPredicted RBP17.32■□□□□ 0.36
RPRD1B-206ENST00000495457 ZNF280CQ8ND82 737 aa17.32■□□□□ 0.36
RPRD1B-206ENST00000495457 RIOK1Q9BRS2 568 aaKnown RBP17.32■□□□□ 0.36
RPRD1B-206ENST00000495457 BOLA2Q9H3K6 86 aa17.32■□□□□ 0.36
RPRD1B-206ENST00000495457 SIPA1L1O43166 1804 aa17.32■□□□□ 0.36
RPRD1B-206ENST00000495457 ZSWIM8A7E2V4 1837 aa17.31■□□□□ 0.36
RPRD1B-206ENST00000495457 GDF11O95390 407 aa17.31■□□□□ 0.36
RPRD1B-206ENST00000495457 PDE6AP16499 860 aa17.31■□□□□ 0.36
RPRD1B-206ENST00000495457 TREML2Q5T2D2 321 aa17.31■□□□□ 0.36
RPRD1B-206ENST00000495457 ARMC5Q96C12 935 aa17.31■□□□□ 0.36
RPRD1B-206ENST00000495457 LRRCC1Q9C099 1032 aa17.31■□□□□ 0.36
RPRD1B-206ENST00000495457 ZNF532Q9HCE3 1301 aa17.3■□□□□ 0.36
RPRD1B-206ENST00000495457 USP17L5A8MUK1 530 aa17.3■□□□□ 0.36
RPRD1B-206ENST00000495457 HLA-DOAP06340 250 aa17.3■□□□□ 0.36
RPRD1B-206ENST00000495457 BCRP11274 1271 aa17.3■□□□□ 0.36
RPRD1B-206ENST00000495457 PSMC4P43686 418 aa17.3■□□□□ 0.36
RPRD1B-206ENST00000495457 HMGCS2P54868 508 aa17.3■□□□□ 0.36
RPRD1B-206ENST00000495457 SLFNL1Q499Z3 407 aa17.3■□□□□ 0.36
RPRD1B-206ENST00000495457 CERS3Q8IU89 383 aa17.3■□□□□ 0.36
RPRD1B-206ENST00000495457 TRIM47Q96LD4 638 aa17.3■□□□□ 0.36
RPRD1B-206ENST00000495457 TRIM34Q9BYJ4 488 aa17.3■□□□□ 0.36
RPRD1B-206ENST00000495457 AGTPBP1Q9UPW5 1226 aa17.3■□□□□ 0.36
RPRD1B-206ENST00000495457 SLC45A1Q9Y2W3 748 aa17.3■□□□□ 0.36
RPRD1B-206ENST00000495457 PHIPQ8WWQ0 1821 aa17.3■□□□□ 0.36
RPRD1B-206ENST00000495457 MAGEB6P1A0A0J9YX57 407 aa17.29■□□□□ 0.36
RPRD1B-206ENST00000495457 TCRBV5S4A2TA0A5A2 114 aa17.29■□□□□ 0.36
RPRD1B-206ENST00000495457 POTEFA5A3E0 1075 aa17.29■□□□□ 0.36
RPRD1B-206ENST00000495457 ATP5JP18859 108 aa17.29■□□□□ 0.36
RPRD1B-206ENST00000495457 TMED8Q6PL24 325 aaPredicted RBP17.29■□□□□ 0.36
RPRD1B-206ENST00000495457 YTHDC1Q96MU7 727 aaKnown RBP17.29■□□□□ 0.36
RPRD1B-206ENST00000495457 PAG1Q9NWQ8 432 aa17.29■□□□□ 0.36
RPRD1B-206ENST00000495457 CDK5RAP2Q96SN8 1893 aa17.29■□□□□ 0.36
RPRD1B-206ENST00000495457 FMNL1O95466 1100 aaPredicted RBP17.28■□□□□ 0.36
RPRD1B-206ENST00000495457 CHGBP05060 677 aa17.28■□□□□ 0.36
RPRD1B-206ENST00000495457 ASNSP08243 561 aa17.28■□□□□ 0.36
RPRD1B-206ENST00000495457 SLC9C1Q4G0N8 1177 aa17.28■□□□□ 0.36
RPRD1B-206ENST00000495457 PROCA1Q8NCQ7 364 aaPredicted RBP17.28■□□□□ 0.36
RPRD1B-206ENST00000495457 SMCR8Q8TEV9 937 aaPredicted RBP17.28■□□□□ 0.36
RPRD1B-206ENST00000495457 SH3TC2Q8TF17 1288 aa17.28■□□□□ 0.36
RPRD1B-206ENST00000495457 ZNF333Q96JL9 665 aa17.28■□□□□ 0.36
RPRD1B-206ENST00000495457 HAUS7Q99871 368 aa17.28■□□□□ 0.36
RPRD1B-206ENST00000495457 TBC1D2Q9BYX2 928 aa17.28■□□□□ 0.36
RPRD1B-206ENST00000495457 AS3MTQ9HBK9 375 aa17.28■□□□□ 0.36
RPRD1B-206ENST00000495457 ZBTB21Q9ULJ3 1066 aa17.28■□□□□ 0.36
RPRD1B-206ENST00000495457 FOCADQ5VW36 1801 aa17.28■□□□□ 0.36
RPRD1B-206ENST00000495457 MYCP01106 439 aaPredicted RBP17.27■□□□□ 0.36
RPRD1B-206ENST00000495457 GNRH1P01148 92 aa17.27■□□□□ 0.36
RPRD1B-206ENST00000495457 OSBPP22059 807 aa17.27■□□□□ 0.36
RPRD1B-206ENST00000495457 PLCD1P51178 756 aa17.27■□□□□ 0.36
RPRD1B-206ENST00000495457 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
RPRD1B-206ENST00000495457 MTMR2Q13614 643 aa17.27■□□□□ 0.36
RPRD1B-206ENST00000495457 SH3D19Q5HYK7 790 aa17.27■□□□□ 0.36
RPRD1B-206ENST00000495457 LCORLQ8N3X6 602 aa17.27■□□□□ 0.36
RPRD1B-206ENST00000495457 WDR18Q9BV38 432 aa17.27■□□□□ 0.36
RPRD1B-206ENST00000495457 DCTPP1Q9H773 170 aa17.27■□□□□ 0.36
RPRD1B-206ENST00000495457 SRRDQ9UH36 339 aa17.27■□□□□ 0.36
RPRD1B-206ENST00000495457 PCDHB15Q9Y5E8 787 aa17.27■□□□□ 0.36
RPRD1B-206ENST00000495457 CENPFP49454 3210 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms