RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 TLE2Q04725 743 aa11.5□□□□□ -0.57
GARNL3-219ENST00000495172 CHAF1AQ13111 956 aaPredicted RBP11.5□□□□□ -0.57
GARNL3-219ENST00000495172 C15orf52Q6ZUT6 534 aaKnown RBP11.5□□□□□ -0.57
GARNL3-219ENST00000495172 FAM83AQ86UY5 434 aa11.5□□□□□ -0.57
GARNL3-219ENST00000495172 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.5□□□□□ -0.57
GARNL3-219ENST00000495172 DBF4Q9UBU7 674 aaPredicted RBP11.5□□□□□ -0.57
GARNL3-219ENST00000495172 AGTPBP1Q9UPW5 1226 aa11.5□□□□□ -0.57
GARNL3-219ENST00000495172 YBX2Q9Y2T7 364 aaKnown RBP11.5□□□□□ -0.57
GARNL3-219ENST00000495172 BRWD1Q9NSI6 2320 aa11.5□□□□□ -0.57
GARNL3-219ENST00000495172 WDR87Q6ZQQ6 2873 aa11.5□□□□□ -0.57
GARNL3-219ENST00000495172 PHF20L1A8MW92 1017 aa11.49□□□□□ -0.57
GARNL3-219ENST00000495172 GOLGA2Q08379 1002 aa11.49□□□□□ -0.57
GARNL3-219ENST00000495172 CWF19L2Q2TBE0 894 aaKnown RBP11.49□□□□□ -0.57
GARNL3-219ENST00000495172 TRPV1Q8NER1 839 aa11.49□□□□□ -0.57
GARNL3-219ENST00000495172 TDRD7Q8NHU6 1098 aaKnown RBP11.49□□□□□ -0.57
GARNL3-219ENST00000495172 TXNRD2Q9NNW7 524 aa11.49□□□□□ -0.57
GARNL3-219ENST00000495172 HYPKQ9NX55 129 aa11.49□□□□□ -0.57
GARNL3-219ENST00000495172 SLC45A1Q9Y2W3 748 aa11.49□□□□□ -0.57
GARNL3-219ENST00000495172 DMDP11532 3685 aa11.48□□□□□ -0.57
GARNL3-219ENST00000495172 DNM1LO00429 736 aa11.48□□□□□ -0.57
GARNL3-219ENST00000495172 ERC2O15083 957 aa11.48□□□□□ -0.57
GARNL3-219ENST00000495172 RGS20O76081 388 aa11.48□□□□□ -0.57
GARNL3-219ENST00000495172 ADCYAP1R1P41586 468 aa11.48□□□□□ -0.57
GARNL3-219ENST00000495172 FPGSQ05932 587 aa11.48□□□□□ -0.57
GARNL3-219ENST00000495172 MKRN4PQ13434 485 aaPredicted RBP11.48□□□□□ -0.57
GARNL3-219ENST00000495172 C16orf59Q7L2K0 433 aa11.48□□□□□ -0.57
GARNL3-219ENST00000495172 UBE3BQ7Z3V4 1068 aa11.48□□□□□ -0.57
GARNL3-219ENST00000495172 SCYL3Q8IZE3 742 aa11.48□□□□□ -0.57
GARNL3-219ENST00000495172 NUDT12Q9BQG2 462 aa11.48□□□□□ -0.57
GARNL3-219ENST00000495172 ASCC2Q9H1I8 757 aaPredicted RBP11.48□□□□□ -0.57
GARNL3-219ENST00000495172 PORCNQ9H237 461 aa11.48□□□□□ -0.57
GARNL3-219ENST00000495172 TSPYL2Q9H2G4 693 aaPredicted RBP11.48□□□□□ -0.57
GARNL3-219ENST00000495172 TMOD2Q9NZR1 351 aa11.48□□□□□ -0.57
GARNL3-219ENST00000495172 DDX20Q9UHI6 824 aaKnown RBP11.48□□□□□ -0.57
GARNL3-219ENST00000495172 RPAP1Q9BWH6 1393 aaPredicted RBP11.48□□□□□ -0.57
GARNL3-219ENST00000495172 KMT2BQ9UMN6 2715 aaPredicted RBP11.48□□□□□ -0.57
GARNL3-219ENST00000495172 CFAP47Q6ZTR5 3102 aa11.47□□□□□ -0.57
GARNL3-219ENST00000495172 DOCK1Q14185 1865 aa11.47□□□□□ -0.57
GARNL3-219ENST00000495172 ST18O60284 1047 aa11.47□□□□□ -0.57
GARNL3-219ENST00000495172 MYOGP15173 224 aa11.47□□□□□ -0.57
GARNL3-219ENST00000495172 PPP2R1AP30153 589 aa11.47□□□□□ -0.57
GARNL3-219ENST00000495172 AAK1Q2M2I8 961 aa11.47□□□□□ -0.57
GARNL3-219ENST00000495172 USP6NLQ92738 828 aa11.47□□□□□ -0.57
GARNL3-219ENST00000495172 TEKT1Q969V4 418 aa11.47□□□□□ -0.57
GARNL3-219ENST00000495172 HOOK2Q96ED9 719 aa11.47□□□□□ -0.57
GARNL3-219ENST00000495172 METTL22Q9BUU2 404 aaPredicted RBP11.47□□□□□ -0.57
GARNL3-219ENST00000495172 PICK1Q9NRD5 415 aa11.47□□□□□ -0.57
GARNL3-219ENST00000495172 RAG1P15918 1043 aa11.46□□□□□ -0.57
GARNL3-219ENST00000495172 CYP2C19P33261 490 aa11.46□□□□□ -0.57
GARNL3-219ENST00000495172 FAM151AQ8WW52 585 aa11.46□□□□□ -0.57
GARNL3-219ENST00000495172 LPAR1Q92633 364 aa11.46□□□□□ -0.57
GARNL3-219ENST00000495172 ZNF594Q96JF6 807 aaPredicted RBP11.46□□□□□ -0.57
GARNL3-219ENST00000495172 ZDHHC15Q96MV8 337 aa11.46□□□□□ -0.57
GARNL3-219ENST00000495172 FAM198AQ9UFP1 575 aa11.46□□□□□ -0.57
GARNL3-219ENST00000495172 MAP3K2Q9Y2U5 619 aa11.46□□□□□ -0.57
GARNL3-219ENST00000495172 DOCK2Q92608 1830 aa11.46□□□□□ -0.58
GARNL3-219ENST00000495172 LOC285556D6RIA3 1793 aa11.46□□□□□ -0.58
GARNL3-219ENST00000495172 A0A0G2JMZ2 1700 aa11.46□□□□□ -0.58
GARNL3-219ENST00000495172 ATRNL1Q5VV63 1379 aa11.45□□□□□ -0.58
GARNL3-219ENST00000495172 PTPRZ1P23471 2315 aaPredicted RBP11.45□□□□□ -0.58
GARNL3-219ENST00000495172 ACRP10323 421 aa11.45□□□□□ -0.58
GARNL3-219ENST00000495172 XRCC5P13010 732 aaKnown RBP11.45□□□□□ -0.58
GARNL3-219ENST00000495172 RABGGTBP53611 331 aa11.45□□□□□ -0.58
GARNL3-219ENST00000495172 HMGCS2P54868 508 aa11.45□□□□□ -0.58
GARNL3-219ENST00000495172 RIPK4P57078 832 aa11.45□□□□□ -0.58
GARNL3-219ENST00000495172 SNX17Q15036 470 aa11.45□□□□□ -0.58
GARNL3-219ENST00000495172 Q3C1V9 767 aa11.45□□□□□ -0.58
GARNL3-219ENST00000495172 FAM84BQ96KN1 310 aaPredicted RBP11.45□□□□□ -0.58
GARNL3-219ENST00000495172 CERS4Q9HA82 394 aa11.45□□□□□ -0.58
GARNL3-219ENST00000495172 FAM86C1Q9NVL1 165 aa11.45□□□□□ -0.58
GARNL3-219ENST00000495172 VPS13AQ96RL7 3174 aa11.44□□□□□ -0.58
GARNL3-219ENST00000495172 FAM196BA6NMK8 535 aa11.44□□□□□ -0.58
GARNL3-219ENST00000495172 PQBP1O60828 265 aaKnown RBP11.44□□□□□ -0.58
GARNL3-219ENST00000495172 NEFMP07197 916 aa11.44□□□□□ -0.58
GARNL3-219ENST00000495172 CSPP1Q1MSJ5 1256 aa11.44□□□□□ -0.58
GARNL3-219ENST00000495172 MORN1Q5T089 497 aa11.44□□□□□ -0.58
GARNL3-219ENST00000495172 DUSP27Q5VZP5 1158 aa11.44□□□□□ -0.58
GARNL3-219ENST00000495172 PRSS33Q8NF86 280 aa11.44□□□□□ -0.58
GARNL3-219ENST00000495172 EPOPA6NHQ4 379 aa11.43□□□□□ -0.58
GARNL3-219ENST00000495172 ELL2O00472 640 aaPredicted RBP11.43□□□□□ -0.58
GARNL3-219ENST00000495172 CLTBP09497 229 aa11.43□□□□□ -0.58
GARNL3-219ENST00000495172 HIBADHP31937 336 aaKnown RBP11.43□□□□□ -0.58
GARNL3-219ENST00000495172 GCLCP48506 637 aaPredicted RBP11.43□□□□□ -0.58
GARNL3-219ENST00000495172 FOXK2Q01167 660 aa11.43□□□□□ -0.58
GARNL3-219ENST00000495172 TMEM240Q5SV17 173 aa11.43□□□□□ -0.58
GARNL3-219ENST00000495172 FKBP1CQ5VVH2 108 aa11.43□□□□□ -0.58
GARNL3-219ENST00000495172 CDC42EP5Q6NZY7 148 aa11.43□□□□□ -0.58
GARNL3-219ENST00000495172 SH3BP5LQ7L8J4 393 aa11.43□□□□□ -0.58
GARNL3-219ENST00000495172 GPR142Q7Z601 462 aa11.43□□□□□ -0.58
GARNL3-219ENST00000495172 MORF4L1Q9UBU8 362 aa11.43□□□□□ -0.58
GARNL3-219ENST00000495172 PNMA3Q9UL41 463 aa11.43□□□□□ -0.58
GARNL3-219ENST00000495172 PKD1L2Q7Z442 2459 aa11.43□□□□□ -0.58
GARNL3-219ENST00000495172 CHL1O00533 1208 aa11.42□□□□□ -0.58
GARNL3-219ENST00000495172 KIAA0355O15063 1070 aa11.42□□□□□ -0.58
GARNL3-219ENST00000495172 RGS2P41220 211 aa11.42□□□□□ -0.58
GARNL3-219ENST00000495172 SPP2Q13103 211 aa11.42□□□□□ -0.58
GARNL3-219ENST00000495172 DIXDC1Q155Q3 683 aa11.42□□□□□ -0.58
GARNL3-219ENST00000495172 IER5LQ5T953 404 aa11.42□□□□□ -0.58
GARNL3-219ENST00000495172 HFE2Q6ZVN8 426 aa11.42□□□□□ -0.58
GARNL3-219ENST00000495172 NPLOC4Q8TAT6 608 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms