RNA–Protein interactions for RNA: ENST00000495000.1

C1orf61-222, Transcript of chromosome 1 open reading frame 61, human

TSL 2

Gene C1orf61, Length 1,091 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf61-222	ENST00000495000	SAP30BP	Q9UHR5	308 aa	Known RBP	13.13	□□□□□ -0.31
C1orf61-222	ENST00000495000	PHIP	Q8WWQ0	1821 aa		13.13	□□□□□ -0.31
C1orf61-222	ENST00000495000	ZNF532	Q9HCE3	1301 aa		13.13	□□□□□ -0.31
C1orf61-222	ENST00000495000	NAV1	Q8NEY1	1877 aa		13.12	□□□□□ -0.31
C1orf61-222	ENST00000495000	PTPRA	P18433	802 aa		13.12	□□□□□ -0.31
C1orf61-222	ENST00000495000	TAF1C	Q15572	869 aa	Predicted RBP	13.12	□□□□□ -0.31
C1orf61-222	ENST00000495000	SLC4A8	Q2Y0W8	1093 aa		13.12	□□□□□ -0.31
C1orf61-222	ENST00000495000	CTU1	Q7Z7A3	348 aa	Known RBP	13.12	□□□□□ -0.31
C1orf61-222	ENST00000495000	FAM43A	Q8N2R8	423 aa		13.12	□□□□□ -0.31
C1orf61-222	ENST00000495000	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.12	□□□□□ -0.31
C1orf61-222	ENST00000495000	TRIM34	Q9BYJ4	488 aa		13.12	□□□□□ -0.31
C1orf61-222	ENST00000495000	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
C1orf61-222	ENST00000495000	ECHDC1	Q9NTX5	307 aa		13.12	□□□□□ -0.31
C1orf61-222	ENST00000495000	HERC5	Q9UII4	1024 aa	Known RBP	13.12	□□□□□ -0.31
C1orf61-222	ENST00000495000	PALD1	Q9ULE6	856 aa		13.12	□□□□□ -0.31
C1orf61-222	ENST00000495000	KCNH4	Q9UQ05	1017 aa		13.12	□□□□□ -0.31
C1orf61-222	ENST00000495000	ZHX2	Q9Y6X8	837 aa		13.12	□□□□□ -0.31
C1orf61-222	ENST00000495000	BTBD19	C9JJ37	291 aa		13.11	□□□□□ -0.31
C1orf61-222	ENST00000495000	HLA-DOA	P06340	250 aa		13.11	□□□□□ -0.31
C1orf61-222	ENST00000495000	TSHZ3	Q63HK5	1081 aa		13.11	□□□□□ -0.31
C1orf61-222	ENST00000495000	RIOK1	Q9BRS2	568 aa	Known RBP	13.11	□□□□□ -0.31
C1orf61-222	ENST00000495000	ZFYVE28	Q9HCC9	887 aa		13.11	□□□□□ -0.31
C1orf61-222	ENST00000495000	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.11	□□□□□ -0.31
C1orf61-222	ENST00000495000	PTPRF	P10586	1907 aa		13.11	□□□□□ -0.31
C1orf61-222	ENST00000495000	TCRBV5S4A2T	A0A5A2	114 aa		13.1	□□□□□ -0.31
C1orf61-222	ENST00000495000	CXCL11	O14625	94 aa		13.1	□□□□□ -0.31
C1orf61-222	ENST00000495000	ADD2	P35612	726 aa		13.1	□□□□□ -0.31
C1orf61-222	ENST00000495000	CCDC84	Q86UT8	332 aa	Predicted RBP	13.1	□□□□□ -0.31
C1orf61-222	ENST00000495000	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.1	□□□□□ -0.31
C1orf61-222	ENST00000495000	ZCCHC17	Q9NP64	241 aa	Known RBP	13.1	□□□□□ -0.31
C1orf61-222	ENST00000495000	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.1	□□□□□ -0.31
C1orf61-222	ENST00000495000	CCDC85C	A6NKD9	419 aa		13.09	□□□□□ -0.31
C1orf61-222	ENST00000495000	CAP2	P40123	477 aa		13.09	□□□□□ -0.31
C1orf61-222	ENST00000495000	RRP1B	Q14684	758 aa	Known RBP	13.09	□□□□□ -0.31
C1orf61-222	ENST00000495000	SLFNL1	Q499Z3	407 aa		13.09	□□□□□ -0.31
C1orf61-222	ENST00000495000	DDX60L	Q5H9U9	1706 aa	Known RBP	13.09	□□□□□ -0.31
C1orf61-222	ENST00000495000	ANKRD23	Q86SG2	305 aa		13.09	□□□□□ -0.31
C1orf61-222	ENST00000495000	ERO1A	Q96HE7	468 aa		13.09	□□□□□ -0.31
C1orf61-222	ENST00000495000	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.09	□□□□□ -0.31
C1orf61-222	ENST00000495000	AFG3L2	Q9Y4W6	797 aa		13.09	□□□□□ -0.31
C1orf61-222	ENST00000495000	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.09	□□□□□ -0.31
C1orf61-222	ENST00000495000		A0A0G2JLL6	359 aa	Predicted RBP	13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	TRIM75P	A6NK02	468 aa		13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	PDHX	O00330	501 aa		13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	MBD4	O95243	580 aa		13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	SP3	Q02447	781 aa		13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	HDAC1	Q13547	482 aa	Predicted RBP	13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	AAMP	Q13685	434 aa		13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	MOGS	Q13724	837 aa		13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	ANKRD45	Q5TZF3	282 aa		13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	ZSCAN25	Q6NSZ9	544 aa		13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	GADL1	Q6ZQY3	521 aa		13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	TTC6	Q86TZ1	520 aa		13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	LCORL	Q8N3X6	602 aa		13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	EXOC6	Q8TAG9	804 aa		13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	CD99L2	Q8TCZ2	262 aa		13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	GCC1	Q96CN9	775 aa		13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	DNAJC18	Q9H819	358 aa		13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	ARMT1	Q9H993	441 aa		13.08	□□□□□ -0.32
C1orf61-222	ENST00000495000	TLR2	O60603	784 aa		13.07	□□□□□ -0.32
C1orf61-222	ENST00000495000	GDF11	O95390	407 aa		13.07	□□□□□ -0.32
C1orf61-222	ENST00000495000	CHGB	P05060	677 aa		13.07	□□□□□ -0.32
C1orf61-222	ENST00000495000	POLR3D	P05423	398 aa	Predicted RBP	13.07	□□□□□ -0.32
C1orf61-222	ENST00000495000	UBE3C	Q15386	1083 aa		13.07	□□□□□ -0.32
C1orf61-222	ENST00000495000	PKN2	Q16513	984 aa	Known RBP	13.07	□□□□□ -0.32
C1orf61-222	ENST00000495000	FASTKD5	Q7L8L6	764 aa	Known RBP	13.07	□□□□□ -0.32
C1orf61-222	ENST00000495000	METTL16	Q86W50	562 aa	Known RBP	13.07	□□□□□ -0.32
C1orf61-222	ENST00000495000	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.07	□□□□□ -0.32
C1orf61-222	ENST00000495000	SDR42E1	Q8WUS8	393 aa		13.07	□□□□□ -0.32
C1orf61-222	ENST00000495000	TRIM17	Q9Y577	477 aa		13.07	□□□□□ -0.32
C1orf61-222	ENST00000495000	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.07	□□□□□ -0.32
C1orf61-222	ENST00000495000	TTC41P	Q6P2S7	1318 aa		13.07	□□□□□ -0.32
C1orf61-222	ENST00000495000	MYH8	P13535	1937 aa		13.06	□□□□□ -0.32
C1orf61-222	ENST00000495000	USP17L5	A8MUK1	530 aa		13.06	□□□□□ -0.32
C1orf61-222	ENST00000495000	ERC2	O15083	957 aa		13.06	□□□□□ -0.32
C1orf61-222	ENST00000495000	ASNS	P08243	561 aa		13.06	□□□□□ -0.32
C1orf61-222	ENST00000495000	MX1	P20591	662 aa		13.06	□□□□□ -0.32
C1orf61-222	ENST00000495000	SPP2	Q13103	211 aa		13.06	□□□□□ -0.32
C1orf61-222	ENST00000495000	GPAT2	Q6NUI2	795 aa		13.06	□□□□□ -0.32
C1orf61-222	ENST00000495000	KBTBD3	Q8NAB2	608 aa		13.06	□□□□□ -0.32
C1orf61-222	ENST00000495000	ZNF280C	Q8ND82	737 aa		13.06	□□□□□ -0.32
C1orf61-222	ENST00000495000	TBC1D2	Q9BYX2	928 aa		13.06	□□□□□ -0.32
C1orf61-222	ENST00000495000	EHD4	Q9H223	541 aa		13.06	□□□□□ -0.32
C1orf61-222	ENST00000495000	AS3MT	Q9HBK9	375 aa		13.06	□□□□□ -0.32
C1orf61-222	ENST00000495000	MCM9	Q9NXL9	1143 aa		13.06	□□□□□ -0.32
C1orf61-222	ENST00000495000	SERPINB13	Q9UIV8	391 aa		13.06	□□□□□ -0.32
C1orf61-222	ENST00000495000	LOC285556	D6RIA3	1793 aa		13.05	□□□□□ -0.32
C1orf61-222	ENST00000495000	ZSWIM8	A7E2V4	1837 aa		13.05	□□□□□ -0.32
C1orf61-222	ENST00000495000	PRKAB2	O43741	272 aa		13.05	□□□□□ -0.32
C1orf61-222	ENST00000495000	GLRX3	O76003	335 aa	Known RBP	13.05	□□□□□ -0.32
C1orf61-222	ENST00000495000	PLCD1	P51178	756 aa		13.05	□□□□□ -0.32
C1orf61-222	ENST00000495000	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.05	□□□□□ -0.32
C1orf61-222	ENST00000495000	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.05	□□□□□ -0.32
C1orf61-222	ENST00000495000	OTOP1	Q7RTM1	612 aa		13.05	□□□□□ -0.32
C1orf61-222	ENST00000495000	PI4K2B	Q8TCG2	481 aa		13.05	□□□□□ -0.32
C1orf61-222	ENST00000495000	PARK7	Q99497	189 aa	Known RBP	13.05	□□□□□ -0.32
C1orf61-222	ENST00000495000	RWDD1	Q9H446	243 aa	Predicted RBP	13.05	□□□□□ -0.32
C1orf61-222	ENST00000495000	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.05	□□□□□ -0.32
C1orf61-222	ENST00000495000	CPA4	Q9UI42	421 aa		13.05	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms