RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 NRG1Q02297 640 aaPredicted RBP8.03□□□□□ -1.12
SRRM1-218ENST00000494934 EXOSC6Q5RKV6 272 aaKnown RBP8.03□□□□□ -1.12
SRRM1-218ENST00000494934 FBXW10Q5XX13 1052 aa8.03□□□□□ -1.12
SRRM1-218ENST00000494934 DZIP1LQ8IYY4 767 aaKnown RBP8.03□□□□□ -1.12
SRRM1-218ENST00000494934 REXO1Q8N1G1 1221 aaKnown RBP8.03□□□□□ -1.12
SRRM1-218ENST00000494934 DDX54Q8TDD1 881 aaKnown RBP8.03□□□□□ -1.12
SRRM1-218ENST00000494934 KCNB2Q92953 911 aa8.03□□□□□ -1.12
SRRM1-218ENST00000494934 CORO1BQ9BR76 489 aa8.03□□□□□ -1.12
SRRM1-218ENST00000494934 WDR18Q9BV38 432 aa8.03□□□□□ -1.12
SRRM1-218ENST00000494934 RUSC1Q9BVN2 902 aa8.03□□□□□ -1.12
SRRM1-218ENST00000494934 SUGCTQ9HAC7 445 aa8.03□□□□□ -1.12
SRRM1-218ENST00000494934 EIF4EBP3O60516 100 aaPredicted RBP8.02□□□□□ -1.13
SRRM1-218ENST00000494934 NFE2L2Q16236 605 aa8.02□□□□□ -1.13
SRRM1-218ENST00000494934 TXNRD3Q86VQ6 643 aa8.02□□□□□ -1.13
SRRM1-218ENST00000494934 SMG8Q8ND04 991 aaKnown RBP8.02□□□□□ -1.13
SRRM1-218ENST00000494934 TRIM55Q9BYV6 548 aa8.02□□□□□ -1.13
SRRM1-218ENST00000494934 ANTXR1Q9H6X2 564 aa8.02□□□□□ -1.13
SRRM1-218ENST00000494934 KRT82Q9NSB4 513 aa8.02□□□□□ -1.13
SRRM1-218ENST00000494934 SIRPGQ9P1W8 387 aa8.02□□□□□ -1.13
SRRM1-218ENST00000494934 PCDHB14Q9Y5E9 798 aa8.02□□□□□ -1.13
SRRM1-218ENST00000494934 CANXP27824 592 aaKnown RBP8.01□□□□□ -1.13
SRRM1-218ENST00000494934 INPP5AQ14642 412 aa8.01□□□□□ -1.13
SRRM1-218ENST00000494934 KIF4BQ2VIQ3 1234 aa8.01□□□□□ -1.13
SRRM1-218ENST00000494934 WIPI1Q5MNZ9 446 aaPredicted RBP8.01□□□□□ -1.13
SRRM1-218ENST00000494934 RUFY4Q6ZNE9 571 aa8.01□□□□□ -1.13
SRRM1-218ENST00000494934 MICAL1Q8TDZ2 1067 aa8.01□□□□□ -1.13
SRRM1-218ENST00000494934 MKL1Q969V6 931 aa8.01□□□□□ -1.13
SRRM1-218ENST00000494934 MRFAP1L1Q96HT8 127 aa8.01□□□□□ -1.13
SRRM1-218ENST00000494934 SRPK1Q96SB4 655 aaKnown RBP8.01□□□□□ -1.13
SRRM1-218ENST00000494934 RNF208Q9H0X6 261 aa8.01□□□□□ -1.13
SRRM1-218ENST00000494934 TNKS2Q9H2K2 1166 aa8.01□□□□□ -1.13
SRRM1-218ENST00000494934 EHMT1Q9H9B1 1298 aa8.01□□□□□ -1.13
SRRM1-218ENST00000494934 AOC2O75106 756 aa8□□□□□ -1.13
SRRM1-218ENST00000494934 DRD2P14416 443 aa8□□□□□ -1.13
SRRM1-218ENST00000494934 PREPP48147 710 aa8□□□□□ -1.13
SRRM1-218ENST00000494934 TCEAL1Q15170 157 aa8□□□□□ -1.13
SRRM1-218ENST00000494934 TNNI3KQ59H18 835 aa8□□□□□ -1.13
SRRM1-218ENST00000494934 SCARA3Q6AZY7 606 aa8□□□□□ -1.13
SRRM1-218ENST00000494934 LRFN4Q6PJG9 635 aa8□□□□□ -1.13
SRRM1-218ENST00000494934 PLPPR2Q96GM1 343 aa8□□□□□ -1.13
SRRM1-218ENST00000494934 FAM46AQ96IP4 442 aaKnown RBP8□□□□□ -1.13
SRRM1-218ENST00000494934 DEPDC7Q96QD5 511 aa8□□□□□ -1.13
SRRM1-218ENST00000494934 PPP1R9AQ9ULJ8 1098 aa8□□□□□ -1.13
SRRM1-218ENST00000494934 PCDHA4Q9UN74 947 aa8□□□□□ -1.13
SRRM1-218ENST00000494934 MSRB2Q9Y3D2 182 aa8□□□□□ -1.13
SRRM1-218ENST00000494934 CORINQ9Y5Q5 1042 aa8□□□□□ -1.13
SRRM1-218ENST00000494934 SYNGAP1Q96PV0 1343 aa8□□□□□ -1.13
SRRM1-218ENST00000494934 CCDC85CA6NKD9 419 aa7.99□□□□□ -1.13
SRRM1-218ENST00000494934 GFRA2O00451 464 aa7.99□□□□□ -1.13
SRRM1-218ENST00000494934 ATE1O95260 518 aa7.99□□□□□ -1.13
SRRM1-218ENST00000494934 EGFLAMQ63HQ2 1017 aa7.99□□□□□ -1.13
SRRM1-218ENST00000494934 ARMC10Q8N2F6 343 aa7.99□□□□□ -1.13
SRRM1-218ENST00000494934 RBBP8NLQ8NC74 664 aaPredicted RBP7.99□□□□□ -1.13
SRRM1-218ENST00000494934 GSX1Q9H4S2 264 aaPredicted RBP7.99□□□□□ -1.13
SRRM1-218ENST00000494934 ST7Q9NRC1 585 aa7.99□□□□□ -1.13
SRRM1-218ENST00000494934 ACTR10Q9NZ32 417 aa7.99□□□□□ -1.13
SRRM1-218ENST00000494934 TMPRSS2O15393 492 aa7.98□□□□□ -1.13
SRRM1-218ENST00000494934 DNAJA2O60884 412 aa7.98□□□□□ -1.13
SRRM1-218ENST00000494934 HTR3BO95264 441 aa7.98□□□□□ -1.13
SRRM1-218ENST00000494934 ADH5P11766 374 aa7.98□□□□□ -1.13
SRRM1-218ENST00000494934 HSP90B1P14625 803 aaKnown RBP7.98□□□□□ -1.13
SRRM1-218ENST00000494934 PDE3AQ14432 1141 aa7.98□□□□□ -1.13
SRRM1-218ENST00000494934 DDR2Q16832 855 aa7.98□□□□□ -1.13
SRRM1-218ENST00000494934 C2CD4AQ8NCU7 369 aaPredicted RBP7.98□□□□□ -1.13
SRRM1-218ENST00000494934 ACSBG1Q96GR2 724 aa7.98□□□□□ -1.13
SRRM1-218ENST00000494934 KANSL2Q9H9L4 492 aa7.98□□□□□ -1.13
SRRM1-218ENST00000494934 ANKRD62A6NC57 917 aa7.97□□□□□ -1.13
SRRM1-218ENST00000494934 B2RBV5 119 aa7.97□□□□□ -1.13
SRRM1-218ENST00000494934 GATA4P43694 442 aa7.97□□□□□ -1.13
SRRM1-218ENST00000494934 SOX4Q06945 474 aaPredicted RBP7.97□□□□□ -1.13
SRRM1-218ENST00000494934 ZC3H12AQ5D1E8 599 aaKnown RBP7.97□□□□□ -1.13
SRRM1-218ENST00000494934 NUTM2GQ5VZR2 741 aa7.97□□□□□ -1.13
SRRM1-218ENST00000494934 ANKRD34AQ69YU3 496 aa7.97□□□□□ -1.13
SRRM1-218ENST00000494934 OR6P1Q8NGX9 317 aa7.97□□□□□ -1.13
SRRM1-218ENST00000494934 RNPC3Q96LT9 517 aaKnown RBP7.97□□□□□ -1.13
SRRM1-218ENST00000494934 CRBNQ96SW2 442 aa7.97□□□□□ -1.13
SRRM1-218ENST00000494934 SPOCK3Q9BQ16 436 aa7.97□□□□□ -1.13
SRRM1-218ENST00000494934 TPSG1Q9NRR2 321 aa7.97□□□□□ -1.13
SRRM1-218ENST00000494934 MAPK8IP1Q9UQF2 711 aa7.97□□□□□ -1.13
SRRM1-218ENST00000494934 R3HCC1Q9Y3T6 440 aaKnown RBP7.97□□□□□ -1.13
SRRM1-218ENST00000494934 PRR36Q9H6K5 1346 aa7.97□□□□□ -1.13
SRRM1-218ENST00000494934 MEIS3P2A8K0S8 358 aa7.96□□□□□ -1.14
SRRM1-218ENST00000494934 U2SURPO15042 1029 aaKnown RBP7.96□□□□□ -1.14
SRRM1-218ENST00000494934 IMPDH2P12268 514 aa7.96□□□□□ -1.14
SRRM1-218ENST00000494934 GLB1P16278 677 aa7.96□□□□□ -1.14
SRRM1-218ENST00000494934 RING1Q06587 406 aa7.96□□□□□ -1.14
SRRM1-218ENST00000494934 CRIM1Q9NZV1 1036 aa7.96□□□□□ -1.14
SRRM1-218ENST00000494934 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.96□□□□□ -1.14
SRRM1-218ENST00000494934 SBNO2Q9Y2G9 1366 aa7.96□□□□□ -1.14
SRRM1-218ENST00000494934 DCDC2CA8MYV0 355 aa7.95□□□□□ -1.14
SRRM1-218ENST00000494934 UPK3BL1B0FP48 263 aa7.95□□□□□ -1.14
SRRM1-218ENST00000494934 UPK3BL2E5RIL1 263 aa7.95□□□□□ -1.14
SRRM1-218ENST00000494934 NTF4P34130 210 aa7.95□□□□□ -1.14
SRRM1-218ENST00000494934 AKAP4Q5JQC9 854 aa7.95□□□□□ -1.14
SRRM1-218ENST00000494934 LARP1BQ659C4 914 aaKnown RBP7.95□□□□□ -1.14
SRRM1-218ENST00000494934 OVOS1Q6IE37 1185 aa7.95□□□□□ -1.14
SRRM1-218ENST00000494934 CYP4F12Q9HCS2 524 aa7.95□□□□□ -1.14
SRRM1-218ENST00000494934 DISC1Q9NRI5 854 aa7.95□□□□□ -1.14
SRRM1-218ENST00000494934 REV1Q9UBZ9 1251 aa7.95□□□□□ -1.14
SRRM1-218ENST00000494934 ACTL7BQ9Y614 415 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms