RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 DPF2Q92785 391 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 USP28Q96RU2 1077 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 PAIP2Q9BPZ3 127 aaKnown RBP5.44□□□□□ -1.54
PRKD3-210ENST00000494667 CD248Q9HCU0 757 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 GOLGA6AQ9NYA3 693 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 FAM184BQ9ULE4 1060 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 POGZQ7Z3K3 1410 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 SMNDC1O75940 238 aaKnown RBP eCLIP5.44□□□□□ -1.54
PRKD3-210ENST00000494667 SLC3A2P08195 630 aaKnown RBP5.44□□□□□ -1.54
PRKD3-210ENST00000494667 PAEPP09466 180 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 CCDC170Q8IYT3 715 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 MMGT1Q8N4V1 131 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 TRIML1Q8N9V2 468 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 KLHL23Q8NBE8 558 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 CNKSR1Q969H4 720 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 ACSBG1Q96GR2 724 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 CALR3Q96L12 384 aaKnown RBP5.44□□□□□ -1.54
PRKD3-210ENST00000494667 OSBPL9Q96SU4 736 aa5.44□□□□□ -1.54
PRKD3-210ENST00000494667 A6NHS1 94 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 MYO1FO00160 1098 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 IMPDH2P12268 514 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 GGCXP38435 758 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 CKAP4Q07065 602 aaKnown RBP5.43□□□□□ -1.54
PRKD3-210ENST00000494667 TSHZ3Q63HK5 1081 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 SYNE3Q6ZMZ3 975 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 APTXQ7Z2E3 356 aaKnown RBP5.43□□□□□ -1.54
PRKD3-210ENST00000494667 FUKQ8N0W3 1084 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 EIF1ADQ8N9N8 165 aaKnown RBP5.43□□□□□ -1.54
PRKD3-210ENST00000494667 CCDC47Q96A33 483 aaKnown RBP5.43□□□□□ -1.54
PRKD3-210ENST00000494667 SUGCTQ9HAC7 445 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 MYO6Q9UM54 1294 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 EMILIN1Q9Y6C2 1016 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 A2ML1A8K2U0 1454 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 GOLGA6L7A0A1B0GV03 622 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 NUTM2FA1L443 756 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 PPP6R2O75170 966 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 RTN3O95197 1032 aaPredicted RBP5.43□□□□□ -1.54
PRKD3-210ENST00000494667 GSTA1P08263 222 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 HMGB1P09429 215 aaKnown RBP5.43□□□□□ -1.54
PRKD3-210ENST00000494667 GCLCP48506 637 aaPredicted RBP5.43□□□□□ -1.54
PRKD3-210ENST00000494667 TBC1D25Q3MII6 688 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 HSP90AB2PQ58FF8 381 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 NUTM2GQ5VZR2 741 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 PPP4R3AQ6IN85 833 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 CYB5D1Q6P9G0 228 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 NFAT5O94916 1531 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 ANO9A1A5B4 782 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 FAM107AO95990 144 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 CPA1P15085 419 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 NDUFA8P51970 172 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 NAA35Q5VZE5 725 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 MIS18BP1Q6P0N0 1132 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 EMBQ6PCB8 327 aa5.43□□□□□ -1.54
PRKD3-210ENST00000494667 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.43□□□□□ -1.54
PRKD3-210ENST00000494667 ANKRD24Q8TF21 1146 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.42□□□□□ -1.544e-7■■■■■ 58.1
PRKD3-210ENST00000494667 SYTL4Q96C24 671 aaPredicted RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 SAAL1Q96ER3 474 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 USP44Q9H0E7 712 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 ARHGAP23Q9P227 1491 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 CPS1P31327 1500 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 AKR1B15C9JRZ8 316 aaPredicted RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 CTDNEP1O95476 244 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 ATP1A3P13637 1013 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 PRLRP16471 622 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 SARSP49591 514 aaKnown RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 GNGT1P63211 74 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 SPATA20Q8TB22 786 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 SELENOOQ9BVL4 669 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 KDM4CQ9H3R0 1056 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 ECHDC1Q9NTX5 307 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 TMEM94Q12767 1356 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 ANKRD65E5RJM6 399 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 MPHOSPH10O00566 681 aaKnown RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 PPFIA2O75334 1257 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 ZNF202O95125 648 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 ERCC5P28715 1186 aaPredicted RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 CLNS1AP54105 237 aaKnown RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 MDM2Q00987 491 aaPredicted RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 TRIM14Q14142 442 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 PTGISQ16647 500 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 GLE1Q53GS7 698 aaKnown RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 CWF19L1Q69YN2 538 aaKnown RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 RAD9BQ6WBX8 426 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 WAPLQ7Z5K2 1190 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 NOA1Q8NC60 698 aaKnown RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 ATL2Q8NHH9 583 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 ZNF473Q8WTR7 871 aaKnown RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 ZNF274Q96GC6 653 aaPredicted RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 RSRC1Q96IZ7 334 aaKnown RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 PURBQ96QR8 312 aaKnown RBP5.42□□□□□ -1.54
PRKD3-210ENST00000494667 CHMP3Q9Y3E7 222 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 USP31Q70CQ4 1352 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 ABCC12Q96J65 1359 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 MST1RQ04912 1400 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 C1orf167Q5SNV9 1468 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 GOLGA6BA6NDN3 693 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 TMEM232C9JQI7 657 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 SLC4A2P04920 1241 aa5.42□□□□□ -1.54
PRKD3-210ENST00000494667 CD151P48509 253 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms