RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ARHGEF6Q15052 776 aa11.73□□□□□ -0.53
MSH5-218ENST00000494646 TPRNQ4KMQ1 711 aa11.73□□□□□ -0.53
MSH5-218ENST00000494646 GPAT2Q6NUI2 795 aa11.73□□□□□ -0.53
MSH5-218ENST00000494646 C17orf99Q6UX52 265 aa11.73□□□□□ -0.53
MSH5-218ENST00000494646 ERC1Q8IUD2 1116 aa11.73□□□□□ -0.53
MSH5-218ENST00000494646 SIRT2Q8IXJ6 389 aa11.73□□□□□ -0.53
MSH5-218ENST00000494646 RHPN1Q8TCX5 695 aa11.73□□□□□ -0.53
MSH5-218ENST00000494646 ATAD5Q96QE3 1844 aa11.73□□□□□ -0.53
MSH5-218ENST00000494646 DDX19BQ9UMR2 479 aa11.73□□□□□ -0.53
MSH5-218ENST00000494646 BRCA2P51587 3418 aa11.73□□□□□ -0.53
MSH5-218ENST00000494646 KIAA0100Q14667 2235 aaKnown RBP11.72□□□□□ -0.53
MSH5-218ENST00000494646 PTPRFP10586 1907 aa11.72□□□□□ -0.53
MSH5-218ENST00000494646 MYH1P12882 1939 aa11.72□□□□□ -0.53
MSH5-218ENST00000494646 DOCK1Q14185 1865 aa11.72□□□□□ -0.53
MSH5-218ENST00000494646 TRIM75PA6NK02 468 aa11.72□□□□□ -0.53
MSH5-218ENST00000494646 TBC1D12O60347 775 aa11.72□□□□□ -0.53
MSH5-218ENST00000494646 MYCP01106 439 aaPredicted RBP11.72□□□□□ -0.53
MSH5-218ENST00000494646 CYP2C8P10632 490 aa11.72□□□□□ -0.53
MSH5-218ENST00000494646 KIF22Q14807 665 aa11.72□□□□□ -0.53
MSH5-218ENST00000494646 SLC4A8Q2Y0W8 1093 aa11.72□□□□□ -0.53
MSH5-218ENST00000494646 C20orf194Q5TEA3 1177 aa11.72□□□□□ -0.53
MSH5-218ENST00000494646 RPAP2Q8IXW5 612 aaPredicted RBP11.72□□□□□ -0.53
MSH5-218ENST00000494646 MIGA1Q8NAN2 632 aa11.72□□□□□ -0.53
MSH5-218ENST00000494646 ZCCHC17Q9NP64 241 aaKnown RBP11.72□□□□□ -0.53
MSH5-218ENST00000494646 ZBTB40Q9NUA8 1239 aa11.72□□□□□ -0.53
MSH5-218ENST00000494646 SAP30BPQ9UHR5 308 aaKnown RBP11.72□□□□□ -0.53
MSH5-218ENST00000494646 PALD1Q9ULE6 856 aa11.72□□□□□ -0.53
MSH5-218ENST00000494646 PTCH2Q9Y6C5 1203 aa11.72□□□□□ -0.53
MSH5-218ENST00000494646 PDE4DIPQ5VU43 2346 aa11.71□□□□□ -0.53
MSH5-218ENST00000494646 DOCK3Q8IZD9 2030 aa11.71□□□□□ -0.53
MSH5-218ENST00000494646 A0A0G2JLL6 359 aaPredicted RBP11.71□□□□□ -0.53
MSH5-218ENST00000494646 POTEFA5A3E0 1075 aa11.71□□□□□ -0.53
MSH5-218ENST00000494646 FMNL1O95466 1100 aaPredicted RBP11.71□□□□□ -0.53
MSH5-218ENST00000494646 CTGFP29279 349 aa11.71□□□□□ -0.53
MSH5-218ENST00000494646 PSMC4P43686 418 aa11.71□□□□□ -0.53
MSH5-218ENST00000494646 LACTBP83111 547 aaPredicted RBP11.71□□□□□ -0.53
MSH5-218ENST00000494646 HSP90AB4PQ58FF6 505 aa11.71□□□□□ -0.53
MSH5-218ENST00000494646 FASTKD5Q7L8L6 764 aaKnown RBP11.71□□□□□ -0.53
MSH5-218ENST00000494646 PRRT2Q7Z6L0 340 aaPredicted RBP11.71□□□□□ -0.53
MSH5-218ENST00000494646 MAGEB6Q8N7X4 407 aa11.71□□□□□ -0.53
MSH5-218ENST00000494646 MGAMO43451 1857 aa11.71□□□□□ -0.53
MSH5-218ENST00000494646 FOCADQ5VW36 1801 aa11.7□□□□□ -0.54
MSH5-218ENST00000494646 PLCG2P16885 1265 aa11.7□□□□□ -0.54
MSH5-218ENST00000494646 CAP2P40123 477 aa11.7□□□□□ -0.54
MSH5-218ENST00000494646 SPP2Q13103 211 aa11.7□□□□□ -0.54
MSH5-218ENST00000494646 CLASRPQ8N2M8 674 aaKnown RBP11.7□□□□□ -0.54
MSH5-218ENST00000494646 SH3TC2Q8TF17 1288 aa11.7□□□□□ -0.54
MSH5-218ENST00000494646 PI4KBQ9UBF8 816 aa11.7□□□□□ -0.54
MSH5-218ENST00000494646 SIPA1L1O43166 1804 aa11.7□□□□□ -0.54
MSH5-218ENST00000494646 MKI67P46013 3256 aaKnown RBP11.7□□□□□ -0.54
MSH5-218ENST00000494646 HMMRO75330 724 aa11.69□□□□□ -0.54
MSH5-218ENST00000494646 IFIT2P09913 472 aaKnown RBP11.69□□□□□ -0.54
MSH5-218ENST00000494646 EN2P19622 333 aaPredicted RBP11.69□□□□□ -0.54
MSH5-218ENST00000494646 USP5P45974 858 aa11.69□□□□□ -0.54
MSH5-218ENST00000494646 JAG1P78504 1218 aa11.69□□□□□ -0.54
MSH5-218ENST00000494646 MAP3K12Q12852 859 aa11.69□□□□□ -0.54
MSH5-218ENST00000494646 SLC9C1Q4G0N8 1177 aa11.69□□□□□ -0.54
MSH5-218ENST00000494646 TREML2Q5T2D2 321 aa11.69□□□□□ -0.54
MSH5-218ENST00000494646 NBPF11Q86T75 865 aa11.69□□□□□ -0.54
MSH5-218ENST00000494646 FOXP4Q8IVH2 680 aaPredicted RBP11.69□□□□□ -0.54
MSH5-218ENST00000494646 CRACR2BQ8N4Y2 399 aaPredicted RBP11.69□□□□□ -0.54
MSH5-218ENST00000494646 KIF1BPQ96EK5 621 aa11.69□□□□□ -0.54
MSH5-218ENST00000494646 PARK7Q99497 189 aaKnown RBP11.69□□□□□ -0.54
MSH5-218ENST00000494646 TRIM34Q9BYJ4 488 aa11.69□□□□□ -0.54
MSH5-218ENST00000494646 DHX36Q9H2U1 1008 aaKnown RBP11.69□□□□□ -0.54
MSH5-218ENST00000494646 MAST2Q6P0Q8 1798 aa11.69□□□□□ -0.54
MSH5-218ENST00000494646 FLT1P17948 1338 aa11.68□□□□□ -0.54
MSH5-218ENST00000494646 ADGRA2Q96PE1 1338 aa11.68□□□□□ -0.54
MSH5-218ENST00000494646 USP17L5A8MUK1 530 aa11.68□□□□□ -0.54
MSH5-218ENST00000494646 SMARCA5O60264 1052 aaPredicted RBP11.68□□□□□ -0.54
MSH5-218ENST00000494646 GDF11O95390 407 aa11.68□□□□□ -0.54
MSH5-218ENST00000494646 OSBPP22059 807 aa11.68□□□□□ -0.54
MSH5-218ENST00000494646 SHROOM1Q2M3G4 852 aaPredicted RBP11.68□□□□□ -0.54
MSH5-218ENST00000494646 ZNF280CQ8ND82 737 aa11.68□□□□□ -0.54
MSH5-218ENST00000494646 ARMC5Q96C12 935 aa11.68□□□□□ -0.54
MSH5-218ENST00000494646 TRIM47Q96LD4 638 aa11.68□□□□□ -0.54
MSH5-218ENST00000494646 DNAJC2Q99543 621 aaKnown RBP11.68□□□□□ -0.54
MSH5-218ENST00000494646 TMEM106CQ9BVX2 250 aa11.68□□□□□ -0.54
MSH5-218ENST00000494646 BOLA2Q9H3K6 86 aa11.68□□□□□ -0.54
MSH5-218ENST00000494646 CHMP4BQ9H444 224 aaKnown RBP11.68□□□□□ -0.54
MSH5-218ENST00000494646 HERC5Q9UII4 1024 aaKnown RBP11.68□□□□□ -0.54
MSH5-218ENST00000494646 GOLIM4O00461 696 aa11.67□□□□□ -0.54
MSH5-218ENST00000494646 RAB11FIP3O75154 756 aa11.67□□□□□ -0.54
MSH5-218ENST00000494646 BCRP11274 1271 aa11.67□□□□□ -0.54
MSH5-218ENST00000494646 HMGCS2P54868 508 aa11.67□□□□□ -0.54
MSH5-218ENST00000494646 EDC3Q96F86 508 aaKnown RBP11.67□□□□□ -0.54
MSH5-218ENST00000494646 ZNF333Q96JL9 665 aa11.67□□□□□ -0.54
MSH5-218ENST00000494646 DNAJC18Q9H819 358 aa11.67□□□□□ -0.54
MSH5-218ENST00000494646 COL2A1P02458 1487 aaPredicted RBP11.66□□□□□ -0.54
MSH5-218ENST00000494646 GNRH1P01148 92 aa11.66□□□□□ -0.54
MSH5-218ENST00000494646 HLA-DOAP06340 250 aa11.66□□□□□ -0.54
MSH5-218ENST00000494646 HOXD10P28358 340 aa11.66□□□□□ -0.54
MSH5-218ENST00000494646 PDE3AQ14432 1141 aa11.66□□□□□ -0.54
MSH5-218ENST00000494646 SLFNL1Q499Z3 407 aa11.66□□□□□ -0.54
MSH5-218ENST00000494646 SLC9C2Q5TAH2 1124 aa11.66□□□□□ -0.54
MSH5-218ENST00000494646 RAET1EQ8TD07 263 aa11.66□□□□□ -0.54
MSH5-218ENST00000494646 SMCR8Q8TEV9 937 aaPredicted RBP11.66□□□□□ -0.54
MSH5-218ENST00000494646 AS3MTQ9HBK9 375 aa11.66□□□□□ -0.54
MSH5-218ENST00000494646 SRRDQ9UH36 339 aa11.66□□□□□ -0.54
MSH5-218ENST00000494646 GABRQQ9UN88 632 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms