RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 B4DLN1 442 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 OPA1O60313 960 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 CPA1P15085 419 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 FERP16591 822 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 ATP4AP20648 1035 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 ABL2P42684 1182 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 MNX1P50219 401 aaPredicted RBP4.56□□□□□ -1.68
ATG3-207ENST00000494571 ME3Q16798 604 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 KIF4BQ2VIQ3 1234 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 MSL1Q68DK7 614 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 KCTD16Q68DU8 428 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 FUKQ8N0W3 1084 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 MIPOL1Q8TD10 442 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 NOC3LQ8WTT2 800 aaKnown RBP4.56□□□□□ -1.68
ATG3-207ENST00000494571 TEKT4Q8WW24 435 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 CCDC47Q96A33 483 aaKnown RBP4.56□□□□□ -1.68
ATG3-207ENST00000494571 XAGE2Q96GT9 111 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 DHRS1Q96LJ7 313 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 NUP58Q9BVL2 599 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 OSBPL1AQ9BXW6 950 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 PREBQ9HCU5 417 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 GALNT8Q9NY28 637 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 RABL2AQ9UBK7 228 aaPredicted RBP4.56□□□□□ -1.68
ATG3-207ENST00000494571 MED14O60244 1454 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 EVC2Q86UK5 1308 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 ZNF644Q9H582 1327 aaPredicted RBP4.55□□□□□ -1.68
ATG3-207ENST00000494571 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.55□□□□□ -1.68
ATG3-207ENST00000494571 VWA3AA6NCI4 1184 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 FAM205CA6NFA0 338 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 BIN1O00499 593 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 CYP27B1O15528 508 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 ANP32DO95626 131 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 DESP17661 470 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 GJB2P29033 226 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 TMF1P82094 1093 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 PPFIA1Q13136 1202 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 IMMTQ16891 758 aaKnown RBP4.55□□□□□ -1.68
ATG3-207ENST00000494571 WHAMMP3Q1A5X7 153 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 HSP90AA4PQ58FG1 418 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 ATL3Q6DD88 541 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 SRGAP1Q7Z6B7 1085 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 RILPL2Q969X0 211 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 HOOK2Q96ED9 719 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 MPHOSPH8Q99549 860 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 CLSTN2Q9H4D0 955 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 OCEL1Q9H607 264 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 ZNHIT6Q9NWK9 470 aaKnown RBP4.55□□□□□ -1.68
ATG3-207ENST00000494571 C2CD2Q9Y426 696 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 ATAD2Q6PL18 1390 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 SPDYE5A6NIY4 337 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 BACH1O14867 736 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 MAP3K13O43283 966 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 SUPT3HO75486 399 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 PRPF6O94906 941 aaKnown RBP4.55□□□□□ -1.68
ATG3-207ENST00000494571 MAP4K4O95819 1239 aaPredicted RBP4.55□□□□□ -1.68
ATG3-207ENST00000494571 PDHA1P08559 390 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 LMNB1P20700 586 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 LMOD1P29536 600 aaPredicted RBP4.55□□□□□ -1.68
ATG3-207ENST00000494571 GCLCP48506 637 aaPredicted RBP4.55□□□□□ -1.68
ATG3-207ENST00000494571 FOSBP53539 338 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 SEC24CP53992 1094 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 ADCY1Q08828 1119 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 SFSWAPQ12872 951 aaKnown RBP4.55□□□□□ -1.68
ATG3-207ENST00000494571 PPP1R7Q15435 360 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 RBM26Q5T8P6 1007 aaKnown RBP4.55□□□□□ -1.68
ATG3-207ENST00000494571 HIBCHQ6NVY1 386 aaPredicted RBP4.55□□□□□ -1.68
ATG3-207ENST00000494571 SYNE3Q6ZMZ3 975 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 SNRNP27Q8WVK2 155 aaKnown RBP4.55□□□□□ -1.68
ATG3-207ENST00000494571 CLIP3Q96DZ5 547 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 NOD2Q9HC29 1040 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 DDX19AQ9NUU7 478 aaKnown RBP4.55□□□□□ -1.68
ATG3-207ENST00000494571 ABCF2Q9UG63 623 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 PPP2R2CQ9Y2T4 447 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 NUB1Q9Y5A7 615 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 POLR1AO95602 1720 aaPredicted RBP4.55□□□□□ -1.68
ATG3-207ENST00000494571 RAPGEF6Q8TEU7 1601 aa4.55□□□□□ -1.68
ATG3-207ENST00000494571 H7C1W4 665 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 CUTAO60888 179 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 ALOX15P16050 662 aaPredicted RBP4.54□□□□□ -1.68
ATG3-207ENST00000494571 VCAM1P19320 739 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 STX1AQ16623 288 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 MAP7D1Q3KQU3 841 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 SARM1Q6SZW1 724 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 SH2D3CQ8N5H7 860 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 HNRNPLLQ8WVV9 542 aaKnown RBP4.54□□□□□ -1.68
ATG3-207ENST00000494571 ZNF570Q96NI8 536 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 ZFATQ9P243 1243 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 CORO1CQ9ULV4 474 aaPredicted RBP4.54□□□□□ -1.68
ATG3-207ENST00000494571 FRMD4BQ9Y2L6 1034 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 C15orf41Q9Y2V0 281 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 USH1CQ9Y6N9 552 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 GRIN2DO15399 1336 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 LRRD1A4D1F6 860 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 CTAGE15A4D2H0 777 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 DPPA5A6NC42 116 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 ELL2O00472 640 aaPredicted RBP4.54□□□□□ -1.68
ATG3-207ENST00000494571 N4BP3O15049 544 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 E2F6O75461 281 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 GFPT2O94808 682 aa4.54□□□□□ -1.68
ATG3-207ENST00000494571 TUBB4AP04350 444 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms