RNA–Protein interactions for RNA: ENST00000494502.6

PDCD10-217, Transcript of programmed cell death 10, humanhuman

TSL 5

Gene PDCD10, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-217ENST00000494502 TRERF1Q96PN7 1200 aa12.34□□□□□ -0.43
PDCD10-217ENST00000494502 PHF24Q9UPV7 400 aa12.34□□□□□ -0.43
PDCD10-217ENST00000494502 SBF1O95248 1867 aa12.34□□□□□ -0.43
PDCD10-217ENST00000494502 PLEKHG2Q9H7P9 1386 aa12.33□□□□□ -0.44
PDCD10-217ENST00000494502 KCPQ6ZWJ8 1503 aa12.33□□□□□ -0.44
PDCD10-217ENST00000494502 GPR25O00155 361 aa12.33□□□□□ -0.44
PDCD10-217ENST00000494502 PPM1GO15355 546 aaPredicted RBP12.33□□□□□ -0.44
PDCD10-217ENST00000494502 EGFRP00533 1210 aa12.33□□□□□ -0.44
PDCD10-217ENST00000494502 VSIG8P0DPA2 414 aa12.33□□□□□ -0.44
PDCD10-217ENST00000494502 DPEP1P16444 411 aa12.33□□□□□ -0.44
PDCD10-217ENST00000494502 ZSCAN29Q8IWY8 852 aaPredicted RBP12.33□□□□□ -0.44
PDCD10-217ENST00000494502 IFNL2Q8IZJ0 200 aa12.33□□□□□ -0.44
PDCD10-217ENST00000494502 CMTR1Q8N1G2 835 aaKnown RBP12.33□□□□□ -0.44
PDCD10-217ENST00000494502 WASHC2AQ641Q2 1341 aa12.33□□□□□ -0.44
PDCD10-217ENST00000494502 TJP1Q07157 1748 aa12.32□□□□□ -0.44
PDCD10-217ENST00000494502 ERCC3P19447 782 aa12.32□□□□□ -0.44
PDCD10-217ENST00000494502 FGFR3P22607 806 aa12.32□□□□□ -0.44
PDCD10-217ENST00000494502 HTRA3P83110 453 aa12.32□□□□□ -0.44
PDCD10-217ENST00000494502 TRAPPC3LQ5T215 181 aa12.32□□□□□ -0.44
PDCD10-217ENST00000494502 NLGN1Q8N2Q7 840 aa12.32□□□□□ -0.44
PDCD10-217ENST00000494502 MARK1Q9P0L2 795 aa12.32□□□□□ -0.44
PDCD10-217ENST00000494502 CNTNAP4Q9C0A0 1308 aa12.32□□□□□ -0.44
PDCD10-217ENST00000494502 ANKRD33BA6NCL7 494 aa12.31□□□□□ -0.44
PDCD10-217ENST00000494502 GPR182O15218 404 aa12.31□□□□□ -0.44
PDCD10-217ENST00000494502 GYS1P13807 737 aa12.31□□□□□ -0.44
PDCD10-217ENST00000494502 CD33P20138 364 aa12.31□□□□□ -0.44
PDCD10-217ENST00000494502 EHHADHQ08426 723 aa12.31□□□□□ -0.44
PDCD10-217ENST00000494502 GRIN2CQ14957 1233 aa12.31□□□□□ -0.44
PDCD10-217ENST00000494502 C9orf131Q5VYM1 1079 aa12.31□□□□□ -0.44
PDCD10-217ENST00000494502 DMRTB1Q96MA1 342 aa12.31□□□□□ -0.44
PDCD10-217ENST00000494502 KDM6AO15550 1401 aaPredicted RBP12.3□□□□□ -0.44
PDCD10-217ENST00000494502 ADAMTS7Q9UKP4 1686 aa12.3□□□□□ -0.44
PDCD10-217ENST00000494502 TERTO14746 1132 aaKnown RBP12.3□□□□□ -0.44
PDCD10-217ENST00000494502 XYLBO75191 536 aa12.3□□□□□ -0.44
PDCD10-217ENST00000494502 KCNA3P22001 575 aa12.3□□□□□ -0.44
PDCD10-217ENST00000494502 XKR5Q6UX68 686 aa12.3□□□□□ -0.44
PDCD10-217ENST00000494502 NPAS4Q8IUM7 802 aa12.3□□□□□ -0.44
PDCD10-217ENST00000494502 GSX2Q9BZM3 304 aa12.3□□□□□ -0.44
PDCD10-217ENST00000494502 FNDC3AQ9Y2H6 1198 aaKnown RBP12.3□□□□□ -0.44
PDCD10-217ENST00000494502 A6NHS1 94 aa12.29□□□□□ -0.44
PDCD10-217ENST00000494502 TREHO43280 583 aa12.29□□□□□ -0.44
PDCD10-217ENST00000494502 RFC4P35249 363 aa12.29□□□□□ -0.44
PDCD10-217ENST00000494502 GAS6Q14393 721 aa12.29□□□□□ -0.44
PDCD10-217ENST00000494502 COL13A1Q5TAT6 717 aaPredicted RBP12.29□□□□□ -0.44
PDCD10-217ENST00000494502 GPR161Q8N6U8 529 aaKnown RBP12.29□□□□□ -0.44
PDCD10-217ENST00000494502 JMYQ8N9B5 988 aa12.29□□□□□ -0.44
PDCD10-217ENST00000494502 ALKBH8Q96BT7 664 aaKnown RBP12.29□□□□□ -0.44
PDCD10-217ENST00000494502 RPS6KA4O75676 772 aa12.28□□□□□ -0.44
PDCD10-217ENST00000494502 FSTL1Q12841 308 aa12.28□□□□□ -0.44
PDCD10-217ENST00000494502 EIF4A2Q14240 407 aaKnown RBP12.28□□□□□ -0.44
PDCD10-217ENST00000494502 DSC3Q14574 896 aa12.28□□□□□ -0.44
PDCD10-217ENST00000494502 C8orf34Q49A92 452 aa12.28□□□□□ -0.44
PDCD10-217ENST00000494502 PDE12Q6L8Q7 609 aaKnown RBP12.28□□□□□ -0.44
PDCD10-217ENST00000494502 C16orf71Q8IYS4 520 aaPredicted RBP12.28□□□□□ -0.44
PDCD10-217ENST00000494502 DCAF5Q96JK2 942 aa12.28□□□□□ -0.44
PDCD10-217ENST00000494502 POLKQ9UBT6 870 aa12.28□□□□□ -0.44
PDCD10-217ENST00000494502 TIAM2Q8IVF5 1701 aa12.28□□□□□ -0.44
PDCD10-217ENST00000494502 DLEC1Q9Y238 1755 aa12.28□□□□□ -0.44
PDCD10-217ENST00000494502 AFDNP55196 1824 aaKnown RBP12.27□□□□□ -0.44
PDCD10-217ENST00000494502 ERVV-2B6SEH9 535 aa12.27□□□□□ -0.45
PDCD10-217ENST00000494502 CTBSQ01459 385 aa12.27□□□□□ -0.45
PDCD10-217ENST00000494502 SPEM2Q0P670 501 aa12.27□□□□□ -0.45
PDCD10-217ENST00000494502 CCINQ13939 588 aa12.27□□□□□ -0.45
PDCD10-217ENST00000494502 SLC30A3Q99726 388 aa12.27□□□□□ -0.45
PDCD10-217ENST00000494502 RNF181Q9P0P0 153 aa12.27□□□□□ -0.45
PDCD10-217ENST00000494502 KDM2BQ8NHM5 1336 aa12.27□□□□□ -0.45
PDCD10-217ENST00000494502 SCN11AQ9UI33 1791 aa12.26□□□□□ -0.45
PDCD10-217ENST00000494502 DDR1Q08345 913 aa12.26□□□□□ -0.45
PDCD10-217ENST00000494502 TTC16Q8NEE8 873 aa12.26□□□□□ -0.45
PDCD10-217ENST00000494502 PIM2Q9P1W9 311 aa12.26□□□□□ -0.45
PDCD10-217ENST00000494502 SRP68Q9UHB9 627 aaKnown RBP12.26□□□□□ -0.45
PDCD10-217ENST00000494502 ERBB4Q15303 1308 aa12.26□□□□□ -0.45
PDCD10-217ENST00000494502 USP42Q9H9J4 1324 aaKnown RBP12.26□□□□□ -0.45
PDCD10-217ENST00000494502 VIRMAQ69YN4 1812 aaKnown RBP12.25□□□□□ -0.45
PDCD10-217ENST00000494502 FMR1Q06787 632 aaKnown RBP eCLIP12.25□□□□□ -0.455e-11■■■■■ 40.4
PDCD10-217ENST00000494502 NFX1Q12986 1120 aaKnown RBP12.25□□□□□ -0.45
PDCD10-217ENST00000494502 COL19A1Q14993 1142 aa12.25□□□□□ -0.45
PDCD10-217ENST00000494502 DALRD3Q5D0E6 543 aaKnown RBP12.25□□□□□ -0.45
PDCD10-217ENST00000494502 EFCC1Q9HA90 598 aa12.25□□□□□ -0.45
PDCD10-217ENST00000494502 NRXN2Q9P2S2 1712 aa12.25□□□□□ -0.45
PDCD10-217ENST00000494502 CCDC88AQ3V6T2 1871 aa12.25□□□□□ -0.45
PDCD10-217ENST00000494502 C2CD2LO14523 706 aa12.24□□□□□ -0.45
PDCD10-217ENST00000494502 HSP90AB1P08238 724 aaKnown RBP12.24□□□□□ -0.45
PDCD10-217ENST00000494502 CHRNA5P30532 468 aa12.24□□□□□ -0.45
PDCD10-217ENST00000494502 CRKLP46109 303 aaKnown RBP12.24□□□□□ -0.45
PDCD10-217ENST00000494502 ZNF438Q7Z4V0 828 aa12.24□□□□□ -0.45
PDCD10-217ENST00000494502 ELP3Q9H9T3 547 aa12.24□□□□□ -0.45
PDCD10-217ENST00000494502 RRAGCQ9HB90 399 aa12.24□□□□□ -0.45
PDCD10-217ENST00000494502 TMEM63CQ9P1W3 806 aa12.24□□□□□ -0.45
PDCD10-217ENST00000494502 SASH3O75995 380 aa12.23□□□□□ -0.45
PDCD10-217ENST00000494502 CABP4P57796 275 aa12.23□□□□□ -0.45
PDCD10-217ENST00000494502 ZNF530Q6P9A1 599 aaPredicted RBP12.23□□□□□ -0.45
PDCD10-217ENST00000494502 ZFATQ9P243 1243 aa12.23□□□□□ -0.45
PDCD10-217ENST00000494502 POLRMTO00411 1230 aaKnown RBP12.22□□□□□ -0.45
PDCD10-217ENST00000494502 TNFRSF21O75509 655 aa12.22□□□□□ -0.45
PDCD10-217ENST00000494502 TNNT2P45379 298 aaPredicted RBP12.22□□□□□ -0.45
PDCD10-217ENST00000494502 RASSF7Q02833 373 aa12.22□□□□□ -0.45
PDCD10-217ENST00000494502 SMC1BQ8NDV3 1235 aa12.22□□□□□ -0.45
PDCD10-217ENST00000494502 NIF3L1Q9GZT8 377 aa12.22□□□□□ -0.45
PDCD10-217ENST00000494502 MX2P20592 715 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms