RNA–Protein interactions for RNA: ENST00000494340.1

LINC02008-202, Transcript of long intergenic non-protein coding RNA 2008, humanhuman

TSL 2

Gene LINC02008, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02008-202ENST00000494340 ARHGAP39Q9C0H5 1083 aa11.87□□□□□ -0.51
LINC02008-202ENST00000494340 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.87□□□□□ -0.512e-8■■■■■ 32.8
LINC02008-202ENST00000494340 GINM1Q9NU53 330 aa11.87□□□□□ -0.51
LINC02008-202ENST00000494340 PNMA3Q9UL41 463 aa11.87□□□□□ -0.51
LINC02008-202ENST00000494340 CDK5RAP2Q96SN8 1893 aa11.87□□□□□ -0.51
LINC02008-202ENST00000494340 CYP2E1P05181 493 aaPredicted RBP11.86□□□□□ -0.51
LINC02008-202ENST00000494340 RLBP1P12271 317 aa11.86□□□□□ -0.51
LINC02008-202ENST00000494340 OSBPP22059 807 aa11.86□□□□□ -0.51
LINC02008-202ENST00000494340 FCGRTP55899 365 aa11.86□□□□□ -0.51
LINC02008-202ENST00000494340 HSP90AB4PQ58FF6 505 aa11.86□□□□□ -0.51
LINC02008-202ENST00000494340 CEP85Q6P2H3 762 aa11.86□□□□□ -0.51
LINC02008-202ENST00000494340 METTL16Q86W50 562 aaKnown RBP11.86□□□□□ -0.51
LINC02008-202ENST00000494340 TRIM47Q96LD4 638 aa11.86□□□□□ -0.51
LINC02008-202ENST00000494340 PI4KBQ9UBF8 816 aa11.86□□□□□ -0.51
LINC02008-202ENST00000494340 AGTPBP1Q9UPW5 1226 aa11.86□□□□□ -0.51
LINC02008-202ENST00000494340 SIPA1L1O43166 1804 aa11.86□□□□□ -0.51
LINC02008-202ENST00000494340 FMNL1O95466 1100 aaPredicted RBP11.85□□□□□ -0.51
LINC02008-202ENST00000494340 EN2P19622 333 aaPredicted RBP11.85□□□□□ -0.51
LINC02008-202ENST00000494340 CTGFP29279 349 aa11.85□□□□□ -0.51
LINC02008-202ENST00000494340 CAP2P40123 477 aa11.85□□□□□ -0.51
LINC02008-202ENST00000494340 PABPC4Q13310 644 aaKnown RBP eCLIP11.85□□□□□ -0.51
LINC02008-202ENST00000494340 SH3D19Q5HYK7 790 aa11.85□□□□□ -0.51
LINC02008-202ENST00000494340 GADL1Q6ZQY3 521 aa11.85□□□□□ -0.51
LINC02008-202ENST00000494340 FOXP4Q8IVH2 680 aaPredicted RBP11.85□□□□□ -0.51
LINC02008-202ENST00000494340 NKX2-3Q8TAU0 364 aa11.85□□□□□ -0.51
LINC02008-202ENST00000494340 RAET1EQ8TD07 263 aa11.85□□□□□ -0.51
LINC02008-202ENST00000494340 SH3RF3Q8TEJ3 882 aaPredicted RBP11.85□□□□□ -0.51
LINC02008-202ENST00000494340 AS3MTQ9HBK9 375 aa11.85□□□□□ -0.51
LINC02008-202ENST00000494340 DBNLQ9UJU6 430 aaKnown RBP11.85□□□□□ -0.51
LINC02008-202ENST00000494340 MYO5AQ9Y4I1 1855 aaKnown RBP11.85□□□□□ -0.51
LINC02008-202ENST00000494340 MYPNQ86TC9 1320 aa11.85□□□□□ -0.51
LINC02008-202ENST00000494340 USP17L5A8MUK1 530 aa11.84□□□□□ -0.51
LINC02008-202ENST00000494340 CYP2C8P10632 490 aa11.84□□□□□ -0.51
LINC02008-202ENST00000494340 GRK4P32298 578 aa11.84□□□□□ -0.51
LINC02008-202ENST00000494340 ZAP70P43403 619 aa11.84□□□□□ -0.51
LINC02008-202ENST00000494340 SLC4A8Q2Y0W8 1093 aa11.84□□□□□ -0.51
LINC02008-202ENST00000494340 ZNF280CQ8ND82 737 aa11.84□□□□□ -0.51
LINC02008-202ENST00000494340 SLAIN1Q8ND83 568 aa11.84□□□□□ -0.51
LINC02008-202ENST00000494340 C1orf115Q9H7X2 142 aa11.84□□□□□ -0.51
LINC02008-202ENST00000494340 AATFQ9NY61 560 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC02008-202ENST00000494340 FLT1P17948 1338 aa11.84□□□□□ -0.51
LINC02008-202ENST00000494340 TRIM75PA6NK02 468 aa11.83□□□□□ -0.52
LINC02008-202ENST00000494340 ASNSP08243 561 aa11.83□□□□□ -0.52
LINC02008-202ENST00000494340 GCLCP48506 637 aaPredicted RBP11.83□□□□□ -0.52
LINC02008-202ENST00000494340 UBXN2AP68543 259 aa11.83□□□□□ -0.52
LINC02008-202ENST00000494340 IRF5Q13568 498 aa11.83□□□□□ -0.52
LINC02008-202ENST00000494340 FAM110CQ1W6H9 321 aa11.83□□□□□ -0.52
LINC02008-202ENST00000494340 SMCR8Q8TEV9 937 aaPredicted RBP11.83□□□□□ -0.52
LINC02008-202ENST00000494340 SH3TC2Q8TF17 1288 aa11.83□□□□□ -0.52
LINC02008-202ENST00000494340 EAF2Q96CJ1 260 aaPredicted RBP11.83□□□□□ -0.52
LINC02008-202ENST00000494340 WDR18Q9BV38 432 aa11.83□□□□□ -0.52
LINC02008-202ENST00000494340 CHMP4BQ9H444 224 aaKnown RBP11.83□□□□□ -0.52
LINC02008-202ENST00000494340 SNRKQ9NRH2 765 aa11.83□□□□□ -0.52
LINC02008-202ENST00000494340 HLA-DOAP06340 250 aa11.82□□□□□ -0.52
LINC02008-202ENST00000494340 SPP2Q13103 211 aa11.82□□□□□ -0.52
LINC02008-202ENST00000494340 ADGRA1Q86SQ6 560 aa11.82□□□□□ -0.52
LINC02008-202ENST00000494340 RPAP2Q8IXW5 612 aaPredicted RBP11.82□□□□□ -0.52
LINC02008-202ENST00000494340 PXYLP1Q8TE99 480 aa11.82□□□□□ -0.52
LINC02008-202ENST00000494340 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.82□□□□□ -0.52
LINC02008-202ENST00000494340 TGFBRAP1Q8WUH2 860 aa11.82□□□□□ -0.52
LINC02008-202ENST00000494340 PIH1D3Q9NQM4 214 aaKnown RBP11.82□□□□□ -0.52
LINC02008-202ENST00000494340 PCDH10Q9P2E7 1040 aa11.82□□□□□ -0.52
LINC02008-202ENST00000494340 DDX19BQ9UMR2 479 aa11.82□□□□□ -0.52
LINC02008-202ENST00000494340 FAM196BA6NMK8 535 aa11.81□□□□□ -0.52
LINC02008-202ENST00000494340 C19orf81C9J6K1 198 aa11.81□□□□□ -0.52
LINC02008-202ENST00000494340 GJB1P08034 283 aa11.81□□□□□ -0.52
LINC02008-202ENST00000494340 SLURP2P0DP57 97 aa11.81□□□□□ -0.52
LINC02008-202ENST00000494340 GJA8P48165 433 aa11.81□□□□□ -0.52
LINC02008-202ENST00000494340 PRKCZQ05513 592 aa11.81□□□□□ -0.52
LINC02008-202ENST00000494340 MAP3K12Q12852 859 aa11.81□□□□□ -0.52
LINC02008-202ENST00000494340 TTF1Q15361 905 aaPredicted RBP11.81□□□□□ -0.52
LINC02008-202ENST00000494340 MAPKAPK5Q8IW41 473 aa11.81□□□□□ -0.52
LINC02008-202ENST00000494340 CCDC8Q9H0W5 538 aaPredicted RBP11.81□□□□□ -0.52
LINC02008-202ENST00000494340 EHD4Q9H223 541 aa11.81□□□□□ -0.52
LINC02008-202ENST00000494340 TLR7Q9NYK1 1049 aaKnown RBP11.81□□□□□ -0.52
LINC02008-202ENST00000494340 MYH1P12882 1939 aa11.81□□□□□ -0.52
LINC02008-202ENST00000494340 TNPO2O14787 897 aaKnown RBP11.8□□□□□ -0.52
LINC02008-202ENST00000494340 HMMRO75330 724 aa11.8□□□□□ -0.52
LINC02008-202ENST00000494340 CYP7A1P22680 504 aa11.8□□□□□ -0.52
LINC02008-202ENST00000494340 HOXA7P31268 230 aaPredicted RBP11.8□□□□□ -0.52
LINC02008-202ENST00000494340 BACE1P56817 501 aa11.8□□□□□ -0.52
LINC02008-202ENST00000494340 RRP1BQ14684 758 aaKnown RBP11.8□□□□□ -0.52
LINC02008-202ENST00000494340 TREML2Q5T2D2 321 aa11.8□□□□□ -0.52
LINC02008-202ENST00000494340 CRACR2BQ8N4Y2 399 aaPredicted RBP11.8□□□□□ -0.52
LINC02008-202ENST00000494340 GTF3C2Q8WUA4 911 aaPredicted RBP11.8□□□□□ -0.52
LINC02008-202ENST00000494340 COA7Q96BR5 231 aa11.8□□□□□ -0.52
LINC02008-202ENST00000494340 KIF1BPQ96EK5 621 aa11.8□□□□□ -0.52
LINC02008-202ENST00000494340 TRIM34Q9BYJ4 488 aa11.8□□□□□ -0.52
LINC02008-202ENST00000494340 DNAJC18Q9H819 358 aa11.8□□□□□ -0.52
LINC02008-202ENST00000494340 TAOK2Q9UL54 1235 aa11.8□□□□□ -0.52
LINC02008-202ENST00000494340 ADCY3O60266 1144 aa11.79□□□□□ -0.52
LINC02008-202ENST00000494340 RAB11FIP3O75154 756 aa11.79□□□□□ -0.52
LINC02008-202ENST00000494340 IDH1O75874 414 aaKnown RBP11.79□□□□□ -0.52
LINC02008-202ENST00000494340 FLT3LGP49771 235 aa11.79□□□□□ -0.52
LINC02008-202ENST00000494340 HMGCS2P54868 508 aa11.79□□□□□ -0.52
LINC02008-202ENST00000494340 MTFR1Q15390 333 aa11.79□□□□□ -0.52
LINC02008-202ENST00000494340 TATDN1Q6P1N9 297 aa11.79□□□□□ -0.52
LINC02008-202ENST00000494340 CCDC84Q86UT8 332 aaPredicted RBP11.79□□□□□ -0.52
LINC02008-202ENST00000494340 AACSQ86V21 672 aa11.79□□□□□ -0.52
LINC02008-202ENST00000494340 CLASRPQ8N2M8 674 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms