RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 NALCNQ8IZF0 1738 aa10.68□□□□□ -0.7
MINDY4-203ENST00000494187 ZSCAN20P17040 1043 aaPredicted RBP10.68□□□□□ -0.7
MINDY4-203ENST00000494187 HSPA1LP34931 641 aa10.68□□□□□ -0.7
MINDY4-203ENST00000494187 STX1AQ16623 288 aa10.68□□□□□ -0.7
MINDY4-203ENST00000494187 SOGA3Q5TF21 947 aa10.68□□□□□ -0.7
MINDY4-203ENST00000494187 ADGRA1Q86SQ6 560 aa10.68□□□□□ -0.7
MINDY4-203ENST00000494187 SMYD4Q8IYR2 804 aaPredicted RBP10.68□□□□□ -0.7
MINDY4-203ENST00000494187 OXER1Q8TDS5 423 aa10.68□□□□□ -0.7
MINDY4-203ENST00000494187 UTRNP46939 3433 aa10.68□□□□□ -0.7
MINDY4-203ENST00000494187 CPDO75976 1380 aa10.68□□□□□ -0.7
MINDY4-203ENST00000494187 NFAT5O94916 1531 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 GSG1L2A8MUP6 293 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 CSF1RP07333 972 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 IDEP14735 1019 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 NYXQ9GZU5 481 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 AFF2P51816 1311 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 MED23Q9ULK4 1368 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 BAG3O95817 575 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 FAM160A1Q05DH4 1040 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 ZNF34Q8IZ26 560 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 FANCBQ8NB91 859 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 FAM84BQ96KN1 310 aaPredicted RBP10.67□□□□□ -0.7
MINDY4-203ENST00000494187 EPB41L4AQ9HCS5 686 aaPredicted RBP10.67□□□□□ -0.7
MINDY4-203ENST00000494187 FRMPD2Q68DX3 1309 aaPredicted RBP10.67□□□□□ -0.7
MINDY4-203ENST00000494187 PFKFB1P16118 471 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 RAD51AP2Q09MP3 1159 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 NKX1-1Q15270 411 aaPredicted RBP10.67□□□□□ -0.7
MINDY4-203ENST00000494187 UBE3CQ15386 1083 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 DPCR1Q3MIW9 517 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 JAKMIP3Q5VZ66 844 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 LRRC47Q8N1G4 583 aaKnown RBP10.67□□□□□ -0.7
MINDY4-203ENST00000494187 CLSTN2Q9H4D0 955 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 CNNM2Q9H8M5 875 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 GPR108Q9NPR9 543 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 PRDM10Q9NQV6 1147 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 PYCARDQ9ULZ3 195 aa10.67□□□□□ -0.7
MINDY4-203ENST00000494187 ERVV-1B6SEH8 477 aa10.66□□□□□ -0.7
MINDY4-203ENST00000494187 SERPINB2P05120 415 aa10.66□□□□□ -0.7
MINDY4-203ENST00000494187 FDPSP14324 419 aaKnown RBP10.66□□□□□ -0.7
MINDY4-203ENST00000494187 RASGRP2Q7LDG7 609 aa10.66□□□□□ -0.7
MINDY4-203ENST00000494187 KCNG4Q8TDN1 519 aa10.66□□□□□ -0.7
MINDY4-203ENST00000494187 ZNF274Q96GC6 653 aaPredicted RBP10.66□□□□□ -0.7
MINDY4-203ENST00000494187 CDCA7Q9BWT1 371 aaPredicted RBP10.66□□□□□ -0.7
MINDY4-203ENST00000494187 USP42Q9H9J4 1324 aaKnown RBP10.66□□□□□ -0.7
MINDY4-203ENST00000494187 SETD1AO15047 1707 aaKnown RBP10.66□□□□□ -0.7
MINDY4-203ENST00000494187 FOXN1O15353 648 aa10.66□□□□□ -0.7
MINDY4-203ENST00000494187 SKILP12757 684 aa10.66□□□□□ -0.7
MINDY4-203ENST00000494187 SLC20A2Q08357 652 aa10.66□□□□□ -0.7
MINDY4-203ENST00000494187 HOOK1Q9UJC3 728 aaKnown RBP10.66□□□□□ -0.7
MINDY4-203ENST00000494187 NOL7Q9UMY1 257 aaKnown RBP10.66□□□□□ -0.7
MINDY4-203ENST00000494187 VIRMAQ69YN4 1812 aaKnown RBP10.66□□□□□ -0.7
MINDY4-203ENST00000494187 TNNT1P13805 278 aa10.66□□□□□ -0.7
MINDY4-203ENST00000494187 LETM2Q2VYF4 491 aa10.66□□□□□ -0.7
MINDY4-203ENST00000494187 PPP4R3BQ5MIZ7 849 aa10.66□□□□□ -0.7
MINDY4-203ENST00000494187 WASF1Q92558 559 aa10.66□□□□□ -0.7
MINDY4-203ENST00000494187 NWD1Q149M9 1564 aa10.66□□□□□ -0.7
MINDY4-203ENST00000494187 TCHHQ07283 1943 aa10.66□□□□□ -0.7
MINDY4-203ENST00000494187 TRIM75PA6NK02 468 aa10.65□□□□□ -0.7
MINDY4-203ENST00000494187 GGA1Q9UJY5 639 aa10.65□□□□□ -0.7
MINDY4-203ENST00000494187 KCNH3Q9ULD8 1083 aa10.65□□□□□ -0.7
MINDY4-203ENST00000494187 PCDHB6Q9Y5E3 794 aa10.65□□□□□ -0.7
MINDY4-203ENST00000494187 NTSR2O95665 410 aa10.65□□□□□ -0.7
MINDY4-203ENST00000494187 DNA2P51530 1060 aa10.65□□□□□ -0.7
MINDY4-203ENST00000494187 TRIM28Q13263 835 aaKnown RBP10.65□□□□□ -0.7
MINDY4-203ENST00000494187 MB21D2Q8IYB1 491 aaPredicted RBP10.65□□□□□ -0.7
MINDY4-203ENST00000494187 MAP7D2Q96T17 732 aa10.65□□□□□ -0.7
MINDY4-203ENST00000494187 VEZTQ9HBM0 779 aa10.65□□□□□ -0.7
MINDY4-203ENST00000494187 SPDYE4A6NLX3 237 aa10.65□□□□□ -0.71
MINDY4-203ENST00000494187 IGSF3O75054 1194 aa10.65□□□□□ -0.71
MINDY4-203ENST00000494187 SFPQP23246 707 aaKnown RBP eCLIP10.65□□□□□ -0.71
MINDY4-203ENST00000494187 NAPAP54920 295 aa10.65□□□□□ -0.71
MINDY4-203ENST00000494187 UBASH3AP57075 661 aa10.65□□□□□ -0.71
MINDY4-203ENST00000494187 ZNF804AQ7Z570 1209 aa10.65□□□□□ -0.71
MINDY4-203ENST00000494187 CDK5RAP3Q96JB5 506 aa10.65□□□□□ -0.71
MINDY4-203ENST00000494187 SERTAD1Q9UHV2 236 aa10.65□□□□□ -0.71
MINDY4-203ENST00000494187 SH2B2O14492 632 aaPredicted RBP10.64□□□□□ -0.71
MINDY4-203ENST00000494187 CCT6AP40227 531 aaKnown RBP10.64□□□□□ -0.71
MINDY4-203ENST00000494187 SNAP25P60880 206 aa10.64□□□□□ -0.71
MINDY4-203ENST00000494187 EXOSC10Q01780 885 aaKnown RBP10.64□□□□□ -0.71
MINDY4-203ENST00000494187 USP49Q70CQ1 688 aa10.64□□□□□ -0.71
MINDY4-203ENST00000494187 SH3RF3Q8TEJ3 882 aaPredicted RBP10.64□□□□□ -0.71
MINDY4-203ENST00000494187 TMEM87BQ96K49 555 aa10.64□□□□□ -0.71
MINDY4-203ENST00000494187 SEC63Q9UGP8 760 aaKnown RBP10.64□□□□□ -0.71
MINDY4-203ENST00000494187 TTF2Q9UNY4 1162 aaKnown RBP10.64□□□□□ -0.71
MINDY4-203ENST00000494187 TNNI2P48788 182 aa10.64□□□□□ -0.71
MINDY4-203ENST00000494187 KIF23Q02241 960 aaPredicted RBP10.64□□□□□ -0.71
MINDY4-203ENST00000494187 GRIN1Q05586 938 aa10.64□□□□□ -0.71
MINDY4-203ENST00000494187 USP17L2Q6R6M4 530 aa10.64□□□□□ -0.71
MINDY4-203ENST00000494187 AMIGO3Q86WK7 504 aa10.64□□□□□ -0.71
MINDY4-203ENST00000494187 SMARCE1Q969G3 411 aa10.64□□□□□ -0.71
MINDY4-203ENST00000494187 LLPHQ9BRT6 129 aaKnown RBP10.64□□□□□ -0.71
MINDY4-203ENST00000494187 ATP1A3P13637 1013 aa10.64□□□□□ -0.71
MINDY4-203ENST00000494187 SLC16A2P36021 539 aa10.64□□□□□ -0.71
MINDY4-203ENST00000494187 UBA7P41226 1012 aa10.64□□□□□ -0.71
MINDY4-203ENST00000494187 NOM1Q5C9Z4 860 aaKnown RBP10.64□□□□□ -0.71
MINDY4-203ENST00000494187 ZSCAN10Q96SZ4 725 aaPredicted RBP10.64□□□□□ -0.71
MINDY4-203ENST00000494187 POLD4Q9HCU8 107 aa10.64□□□□□ -0.71
MINDY4-203ENST00000494187 RGPD5Q99666 1765 aa10.63□□□□□ -0.71
MINDY4-203ENST00000494187 ZNF142P52746 1687 aaPredicted RBP10.63□□□□□ -0.71
MINDY4-203ENST00000494187 BTDP43251 543 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms