RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 AFG3L2Q9Y4W6 797 aa16.4■□□□□ 0.22
CTDSP1-212ENST00000494067 POTEFA5A3E0 1075 aa16.39■□□□□ 0.21
CTDSP1-212ENST00000494067 PLCG2P16885 1265 aa16.39■□□□□ 0.21
CTDSP1-212ENST00000494067 DYNLL1P63167 89 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-212ENST00000494067 JAG1P78504 1218 aa16.39■□□□□ 0.21
CTDSP1-212ENST00000494067 LACTBP83111 547 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-212ENST00000494067 NAA16Q6N069 864 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-212ENST00000494067 TEX11Q8IYF3 940 aa16.39■□□□□ 0.21
CTDSP1-212ENST00000494067 PARK7Q99497 189 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-212ENST00000494067 DNAJC18Q9H819 358 aa16.39■□□□□ 0.21
CTDSP1-212ENST00000494067 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.39■□□□□ 0.211e-5■□□□□ 9.2
CTDSP1-212ENST00000494067 IL1RAPL2Q9NP60 686 aa16.39■□□□□ 0.21
CTDSP1-212ENST00000494067 CPA4Q9UI42 421 aa16.39■□□□□ 0.21
CTDSP1-212ENST00000494067 PTCH2Q9Y6C5 1203 aa16.39■□□□□ 0.21
CTDSP1-212ENST00000494067 A0A0G2JLL6 359 aaPredicted RBP16.38■□□□□ 0.21
CTDSP1-212ENST00000494067 TBC1D12O60347 775 aa16.38■□□□□ 0.21
CTDSP1-212ENST00000494067 CYP2C8P10632 490 aa16.38■□□□□ 0.21
CTDSP1-212ENST00000494067 PRRT2Q7Z6L0 340 aaPredicted RBP16.38■□□□□ 0.21
CTDSP1-212ENST00000494067 ARMC5Q96C12 935 aa16.38■□□□□ 0.21
CTDSP1-212ENST00000494067 RCAN3Q9UKA8 241 aa16.38■□□□□ 0.21
CTDSP1-212ENST00000494067 MKI67P46013 3256 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-212ENST00000494067 MYH1P12882 1939 aa16.37■□□□□ 0.21
CTDSP1-212ENST00000494067 PPP4CP60510 307 aa16.37■□□□□ 0.21
CTDSP1-212ENST00000494067 HSP90AB4PQ58FF6 505 aa16.37■□□□□ 0.21
CTDSP1-212ENST00000494067 GADL1Q6ZQY3 521 aa16.37■□□□□ 0.21
CTDSP1-212ENST00000494067 AACSQ86V21 672 aa16.37■□□□□ 0.21
CTDSP1-212ENST00000494067 ERC1Q8IUD2 1116 aa16.37■□□□□ 0.21
CTDSP1-212ENST00000494067 MAPKAPK5Q8IW41 473 aa16.37■□□□□ 0.21
CTDSP1-212ENST00000494067 RHPN1Q8TCX5 695 aa16.37■□□□□ 0.21
CTDSP1-212ENST00000494067 DHX36Q9H2U1 1008 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-212ENST00000494067 FLT1P17948 1338 aa16.37■□□□□ 0.21
CTDSP1-212ENST00000494067 FMNL1O95466 1100 aaPredicted RBP16.36■□□□□ 0.21
CTDSP1-212ENST00000494067 SLC4A8Q2Y0W8 1093 aa16.36■□□□□ 0.21
CTDSP1-212ENST00000494067 TGFBRAP1Q8WUH2 860 aa16.36■□□□□ 0.21
CTDSP1-212ENST00000494067 TRIM34Q9BYJ4 488 aa16.36■□□□□ 0.21
CTDSP1-212ENST00000494067 TBC1D2Q9BYX2 928 aa16.36■□□□□ 0.21
CTDSP1-212ENST00000494067 CHMP4BQ9H444 224 aaKnown RBP16.36■□□□□ 0.21
CTDSP1-212ENST00000494067 TRIM75PA6NK02 468 aa16.35■□□□□ 0.21
CTDSP1-212ENST00000494067 APBB1O00213 710 aa16.35■□□□□ 0.21
CTDSP1-212ENST00000494067 PSMC4P43686 418 aa16.35■□□□□ 0.21
CTDSP1-212ENST00000494067 PRPF38BQ5VTL8 546 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-212ENST00000494067 MIGA1Q8NAN2 632 aa16.35■□□□□ 0.21
CTDSP1-212ENST00000494067 TRIM47Q96LD4 638 aa16.35■□□□□ 0.21
CTDSP1-212ENST00000494067 PI4KBQ9UBF8 816 aa16.35■□□□□ 0.21
CTDSP1-212ENST00000494067 HERC5Q9UII4 1024 aaKnown RBP16.35■□□□□ 0.21
CTDSP1-212ENST00000494067 SLC45A1Q9Y2W3 748 aa16.35■□□□□ 0.21
CTDSP1-212ENST00000494067 NAV1Q8NEY1 1877 aa16.35■□□□□ 0.21
CTDSP1-212ENST00000494067 IDH1O75874 414 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-212ENST00000494067 BCRP11274 1271 aa16.34■□□□□ 0.21
CTDSP1-212ENST00000494067 CYP7A1P22680 504 aa16.34■□□□□ 0.21
CTDSP1-212ENST00000494067 FCGRTP55899 365 aa16.34■□□□□ 0.21
CTDSP1-212ENST00000494067 TREML2Q5T2D2 321 aa16.34■□□□□ 0.21
CTDSP1-212ENST00000494067 CERS3Q8IU89 383 aa16.34■□□□□ 0.21
CTDSP1-212ENST00000494067 RAET1EQ8TD07 263 aa16.34■□□□□ 0.21
CTDSP1-212ENST00000494067 SMCR8Q8TEV9 937 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-212ENST00000494067 EDC3Q96F86 508 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-212ENST00000494067 ZNF333Q96JL9 665 aa16.34■□□□□ 0.21
CTDSP1-212ENST00000494067 SAP30BPQ9UHR5 308 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-212ENST00000494067 PALD1Q9ULE6 856 aa16.34■□□□□ 0.21
CTDSP1-212ENST00000494067 DDX19BQ9UMR2 479 aa16.34■□□□□ 0.21
CTDSP1-212ENST00000494067 HMMRO75330 724 aa16.33■□□□□ 0.2
CTDSP1-212ENST00000494067 CAP2P40123 477 aa16.33■□□□□ 0.2
CTDSP1-212ENST00000494067 EVX2Q03828 476 aa16.33■□□□□ 0.2
CTDSP1-212ENST00000494067 METTL16Q86W50 562 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-212ENST00000494067 RPAP2Q8IXW5 612 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-212ENST00000494067 CRACR2BQ8N4Y2 399 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-212ENST00000494067 MAGEB6Q8N7X4 407 aa16.33■□□□□ 0.2
CTDSP1-212ENST00000494067 SH3TC2Q8TF17 1288 aa16.33■□□□□ 0.2
CTDSP1-212ENST00000494067 AS3MTQ9HBK9 375 aa16.33■□□□□ 0.2
CTDSP1-212ENST00000494067 PNMA3Q9UL41 463 aa16.33■□□□□ 0.2
CTDSP1-212ENST00000494067 CHGBP05060 677 aa16.32■□□□□ 0.2
CTDSP1-212ENST00000494067 HLA-DOAP06340 250 aa16.32■□□□□ 0.2
CTDSP1-212ENST00000494067 PABPC4Q13310 644 aaKnown RBP eCLIP16.32■□□□□ 0.2
CTDSP1-212ENST00000494067 SLFNL1Q499Z3 407 aa16.32■□□□□ 0.2
CTDSP1-212ENST00000494067 FOXP4Q8IVH2 680 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-212ENST00000494067 SRRDQ9UH36 339 aa16.32■□□□□ 0.2
CTDSP1-212ENST00000494067 MYPNQ86TC9 1320 aa16.31■□□□□ 0.2
CTDSP1-212ENST00000494067 USP17L5A8MUK1 530 aa16.31■□□□□ 0.2
CTDSP1-212ENST00000494067 EN2P19622 333 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-212ENST00000494067 OSBPP22059 807 aa16.31■□□□□ 0.2
CTDSP1-212ENST00000494067 MAP3K12Q12852 859 aa16.31■□□□□ 0.2
CTDSP1-212ENST00000494067 SPP2Q13103 211 aa16.31■□□□□ 0.2
CTDSP1-212ENST00000494067 TMED8Q6PL24 325 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-212ENST00000494067 PROCA1Q8NCQ7 364 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-212ENST00000494067 ZNF280CQ8ND82 737 aa16.31■□□□□ 0.2
CTDSP1-212ENST00000494067 RIOK1Q9BRS2 568 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-212ENST00000494067 BCL11AQ9H165 835 aa16.31■□□□□ 0.2
CTDSP1-212ENST00000494067 AGTPBP1Q9UPW5 1226 aa16.31■□□□□ 0.2
CTDSP1-212ENST00000494067 GDF11O95390 407 aa16.3■□□□□ 0.2
CTDSP1-212ENST00000494067 MYCP01106 439 aaPredicted RBP16.3■□□□□ 0.2
CTDSP1-212ENST00000494067 CLASRPQ8N2M8 674 aaKnown RBP16.3■□□□□ 0.2
CTDSP1-212ENST00000494067 KIF1BPQ96EK5 621 aa16.3■□□□□ 0.2
CTDSP1-212ENST00000494067 BIN2Q9UBW5 565 aaPredicted RBP16.3■□□□□ 0.2
CTDSP1-212ENST00000494067 GABRQQ9UN88 632 aa16.3■□□□□ 0.2
CTDSP1-212ENST00000494067 PLXNB2O15031 1838 aa16.3■□□□□ 0.2
CTDSP1-212ENST00000494067 MYH7P12883 1935 aa16.29■□□□□ 0.2
CTDSP1-212ENST00000494067 TCRBV5S4A2TA0A5A2 114 aa16.29■□□□□ 0.2
CTDSP1-212ENST00000494067 ASNSP08243 561 aa16.29■□□□□ 0.2
CTDSP1-212ENST00000494067 GRK4P32298 578 aa16.29■□□□□ 0.2
CTDSP1-212ENST00000494067 USP5P45974 858 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms