RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 MAST2Q6P0Q8 1798 aa11.92□□□□□ -0.5
UFD1-210ENST00000494054 FLT1P17948 1338 aa11.91□□□□□ -0.5
UFD1-210ENST00000494054 TRIM75PA6NK02 468 aa11.91□□□□□ -0.5
UFD1-210ENST00000494054 PLCG2P16885 1265 aa11.91□□□□□ -0.5
UFD1-210ENST00000494054 CAP2P40123 477 aa11.91□□□□□ -0.5
UFD1-210ENST00000494054 JAG1P78504 1218 aa11.91□□□□□ -0.5
UFD1-210ENST00000494054 GADL1Q6ZQY3 521 aa11.91□□□□□ -0.5
UFD1-210ENST00000494054 MIGA1Q8NAN2 632 aa11.91□□□□□ -0.5
UFD1-210ENST00000494054 ARMC5Q96C12 935 aa11.91□□□□□ -0.5
UFD1-210ENST00000494054 PI4KBQ9UBF8 816 aa11.91□□□□□ -0.5
UFD1-210ENST00000494054 PALD1Q9ULE6 856 aa11.91□□□□□ -0.5
UFD1-210ENST00000494054 DOCK1Q14185 1865 aa11.91□□□□□ -0.5
UFD1-210ENST00000494054 PHIPQ8WWQ0 1821 aa11.9□□□□□ -0.5
UFD1-210ENST00000494054 POTEFA5A3E0 1075 aa11.9□□□□□ -0.5
UFD1-210ENST00000494054 IGSF3O75054 1194 aa11.9□□□□□ -0.5
UFD1-210ENST00000494054 HMMRO75330 724 aa11.9□□□□□ -0.5
UFD1-210ENST00000494054 BCRP11274 1271 aa11.9□□□□□ -0.5
UFD1-210ENST00000494054 ARHGEF6Q15052 776 aa11.9□□□□□ -0.5
UFD1-210ENST00000494054 FASTKD5Q7L8L6 764 aaKnown RBP11.9□□□□□ -0.5
UFD1-210ENST00000494054 MAGEB6Q8N7X4 407 aa11.9□□□□□ -0.5
UFD1-210ENST00000494054 KIF1BPQ96EK5 621 aa11.9□□□□□ -0.5
UFD1-210ENST00000494054 TRIM47Q96LD4 638 aa11.9□□□□□ -0.5
UFD1-210ENST00000494054 BCL11AQ9H165 835 aa11.9□□□□□ -0.5
UFD1-210ENST00000494054 DHX36Q9H2U1 1008 aaKnown RBP11.9□□□□□ -0.5
UFD1-210ENST00000494054 DNAJC18Q9H819 358 aa11.9□□□□□ -0.5
UFD1-210ENST00000494054 SAP30BPQ9UHR5 308 aaKnown RBP11.9□□□□□ -0.5
UFD1-210ENST00000494054 SIPA1L1O43166 1804 aa11.9□□□□□ -0.5
UFD1-210ENST00000494054 RAB11FIP3O75154 756 aa11.89□□□□□ -0.51
UFD1-210ENST00000494054 PSMC4P43686 418 aa11.89□□□□□ -0.51
UFD1-210ENST00000494054 SPP2Q13103 211 aa11.89□□□□□ -0.51
UFD1-210ENST00000494054 PDE3AQ14432 1141 aa11.89□□□□□ -0.51
UFD1-210ENST00000494054 KIF22Q14807 665 aa11.89□□□□□ -0.51
UFD1-210ENST00000494054 SHROOM1Q2M3G4 852 aaPredicted RBP11.89□□□□□ -0.51
UFD1-210ENST00000494054 SLC4A8Q2Y0W8 1093 aa11.89□□□□□ -0.51
UFD1-210ENST00000494054 TREML2Q5T2D2 321 aa11.89□□□□□ -0.51
UFD1-210ENST00000494054 METTL16Q86W50 562 aaKnown RBP11.89□□□□□ -0.51
UFD1-210ENST00000494054 FOXP4Q8IVH2 680 aaPredicted RBP11.89□□□□□ -0.51
UFD1-210ENST00000494054 CLASRPQ8N2M8 674 aaKnown RBP11.89□□□□□ -0.51
UFD1-210ENST00000494054 PARK7Q99497 189 aaKnown RBP11.89□□□□□ -0.51
UFD1-210ENST00000494054 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
UFD1-210ENST00000494054 HERC5Q9UII4 1024 aaKnown RBP11.89□□□□□ -0.51
UFD1-210ENST00000494054 CDK5RAP2Q96SN8 1893 aa11.89□□□□□ -0.51
UFD1-210ENST00000494054 PTPRFP10586 1907 aa11.88□□□□□ -0.51
UFD1-210ENST00000494054 IFIT2P09913 472 aaKnown RBP11.88□□□□□ -0.51
UFD1-210ENST00000494054 MAP3K12Q12852 859 aa11.88□□□□□ -0.51
UFD1-210ENST00000494054 ZNF280CQ8ND82 737 aa11.88□□□□□ -0.51
UFD1-210ENST00000494054 SH3TC2Q8TF17 1288 aa11.88□□□□□ -0.51
UFD1-210ENST00000494054 EDC3Q96F86 508 aaKnown RBP11.88□□□□□ -0.51
UFD1-210ENST00000494054 ZNF333Q96JL9 665 aa11.88□□□□□ -0.51
UFD1-210ENST00000494054 RIOK1Q9BRS2 568 aaKnown RBP11.88□□□□□ -0.51
UFD1-210ENST00000494054 CHMP4BQ9H444 224 aaKnown RBP11.88□□□□□ -0.51
UFD1-210ENST00000494054 SLC45A1Q9Y2W3 748 aa11.88□□□□□ -0.51
UFD1-210ENST00000494054 USP17L5A8MUK1 530 aa11.87□□□□□ -0.51
UFD1-210ENST00000494054 GOLIM4O00461 696 aa11.87□□□□□ -0.51
UFD1-210ENST00000494054 GDF11O95390 407 aa11.87□□□□□ -0.51
UFD1-210ENST00000494054 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
UFD1-210ENST00000494054 GNRH1P01148 92 aa11.87□□□□□ -0.51
UFD1-210ENST00000494054 EN2P19622 333 aaPredicted RBP11.87□□□□□ -0.51
UFD1-210ENST00000494054 OSBPP22059 807 aa11.87□□□□□ -0.51
UFD1-210ENST00000494054 HMGCS2P54868 508 aa11.87□□□□□ -0.51
UFD1-210ENST00000494054 SLC9C1Q4G0N8 1177 aa11.87□□□□□ -0.51
UFD1-210ENST00000494054 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.87□□□□□ -0.51
UFD1-210ENST00000494054 DNAJC2Q99543 621 aaKnown RBP11.87□□□□□ -0.51
UFD1-210ENST00000494054 SRRDQ9UH36 339 aa11.87□□□□□ -0.51
UFD1-210ENST00000494054 AGTPBP1Q9UPW5 1226 aa11.87□□□□□ -0.51
UFD1-210ENST00000494054 FOCADQ5VW36 1801 aa11.87□□□□□ -0.51
UFD1-210ENST00000494054 PDE4DIPQ5VU43 2346 aa11.87□□□□□ -0.51
UFD1-210ENST00000494054 KIAA0100Q14667 2235 aaKnown RBP11.86□□□□□ -0.51
UFD1-210ENST00000494054 SMARCA5O60264 1052 aaPredicted RBP11.86□□□□□ -0.51
UFD1-210ENST00000494054 MYCP01106 439 aaPredicted RBP11.86□□□□□ -0.51
UFD1-210ENST00000494054 PDE6AP16499 860 aa11.86□□□□□ -0.51
UFD1-210ENST00000494054 USP5P45974 858 aa11.86□□□□□ -0.51
UFD1-210ENST00000494054 PRMT2P55345 433 aa11.86□□□□□ -0.51
UFD1-210ENST00000494054 TTF1Q15361 905 aaPredicted RBP11.86□□□□□ -0.51
UFD1-210ENST00000494054 SH3D19Q5HYK7 790 aa11.86□□□□□ -0.51
UFD1-210ENST00000494054 SLC9C2Q5TAH2 1124 aa11.86□□□□□ -0.51
UFD1-210ENST00000494054 CRACR2BQ8N4Y2 399 aaPredicted RBP11.86□□□□□ -0.51
UFD1-210ENST00000494054 PROCA1Q8NCQ7 364 aaPredicted RBP11.86□□□□□ -0.51
UFD1-210ENST00000494054 WDR18Q9BV38 432 aa11.86□□□□□ -0.51
UFD1-210ENST00000494054 BOLA2Q9H3K6 86 aa11.86□□□□□ -0.51
UFD1-210ENST00000494054 ATAD5Q96QE3 1844 aa11.86□□□□□ -0.51
UFD1-210ENST00000494054 ZNF532Q9HCE3 1301 aa11.86□□□□□ -0.51
UFD1-210ENST00000494054 HTTP42858 3142 aa11.85□□□□□ -0.51
UFD1-210ENST00000494054 TCRBV5S4A2TA0A5A2 114 aa11.85□□□□□ -0.51
UFD1-210ENST00000494054 HLA-DOAP06340 250 aa11.85□□□□□ -0.51
UFD1-210ENST00000494054 ASNSP08243 561 aa11.85□□□□□ -0.51
UFD1-210ENST00000494054 ATP5JP18859 108 aa11.85□□□□□ -0.51
UFD1-210ENST00000494054 EVX2Q03828 476 aa11.85□□□□□ -0.51
UFD1-210ENST00000494054 PRKCZQ05513 592 aa11.85□□□□□ -0.51
UFD1-210ENST00000494054 SLFNL1Q499Z3 407 aa11.85□□□□□ -0.51
UFD1-210ENST00000494054 TMED8Q6PL24 325 aaPredicted RBP11.85□□□□□ -0.51
UFD1-210ENST00000494054 NBPF11Q86T75 865 aa11.85□□□□□ -0.51
UFD1-210ENST00000494054 SMCR8Q8TEV9 937 aaPredicted RBP11.85□□□□□ -0.51
UFD1-210ENST00000494054 TRIM34Q9BYJ4 488 aa11.85□□□□□ -0.51
UFD1-210ENST00000494054 TBC1D2Q9BYX2 928 aa11.85□□□□□ -0.51
UFD1-210ENST00000494054 AS3MTQ9HBK9 375 aa11.85□□□□□ -0.51
UFD1-210ENST00000494054 ZBTB21Q9ULJ3 1066 aa11.85□□□□□ -0.51
UFD1-210ENST00000494054 GABRQQ9UN88 632 aa11.85□□□□□ -0.51
UFD1-210ENST00000494054 TNRC18O15417 2968 aaPredicted RBP11.85□□□□□ -0.51
UFD1-210ENST00000494054 MYPNQ86TC9 1320 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms