RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 ZAR1Q86SH2 424 aa9.24□□□□□ -0.93
SSB-212ENST00000494051 ZDHHC13Q8IUH4 622 aa9.24□□□□□ -0.93
SSB-212ENST00000494051 C1GALT1Q9NS00 363 aa9.24□□□□□ -0.93
SSB-212ENST00000494051 UNCXA6NJT0 531 aa9.23□□□□□ -0.93
SSB-212ENST00000494051 NTF4P34130 210 aa9.23□□□□□ -0.93
SSB-212ENST00000494051 ZNF76P36508 570 aa9.23□□□□□ -0.93
SSB-212ENST00000494051 SNAP47Q5SQN1 464 aa9.23□□□□□ -0.93
SSB-212ENST00000494051 SEZ6L2Q6UXD5 910 aa9.23□□□□□ -0.93
SSB-212ENST00000494051 RHOVQ96L33 236 aa9.23□□□□□ -0.93
SSB-212ENST00000494051 OSBPL1AQ9BXW6 950 aa9.23□□□□□ -0.93
SSB-212ENST00000494051 FAM170BA6NMN3 283 aa9.22□□□□□ -0.93
SSB-212ENST00000494051 TGFB1P01137 390 aa9.22□□□□□ -0.93
SSB-212ENST00000494051 ETF1P62495 437 aaKnown RBP9.22□□□□□ -0.93
SSB-212ENST00000494051 GOLM1Q8NBJ4 401 aa9.22□□□□□ -0.93
SSB-212ENST00000494051 GATA6Q92908 595 aa9.22□□□□□ -0.93
SSB-212ENST00000494051 RNF112Q9ULX5 631 aa9.22□□□□□ -0.93
SSB-212ENST00000494051 GFRA2O00451 464 aa9.21□□□□□ -0.94
SSB-212ENST00000494051 BPNT1O95861 308 aa9.21□□□□□ -0.94
SSB-212ENST00000494051 RECKO95980 971 aa9.21□□□□□ -0.94
SSB-212ENST00000494051 F13A1P00488 732 aa9.21□□□□□ -0.94
SSB-212ENST00000494051 VAMP1P23763 118 aa9.21□□□□□ -0.94
SSB-212ENST00000494051 RPL6Q02878 288 aaKnown RBP9.21□□□□□ -0.94
SSB-212ENST00000494051 UBE3DQ7Z6J8 389 aa9.21□□□□□ -0.94
SSB-212ENST00000494051 CCDC84Q86UT8 332 aaPredicted RBP9.21□□□□□ -0.94
SSB-212ENST00000494051 ZNF507Q8TCN5 953 aa9.21□□□□□ -0.94
SSB-212ENST00000494051 KIAA1522Q9P206 1035 aaPredicted RBP9.21□□□□□ -0.94
SSB-212ENST00000494051 FANCCQ00597 558 aa9.2□□□□□ -0.94
SSB-212ENST00000494051 DUSP27Q5VZP5 1158 aa9.2□□□□□ -0.94
SSB-212ENST00000494051 GATAD2BQ8WXI9 593 aa9.2□□□□□ -0.94
SSB-212ENST00000494051 WNT10AQ9GZT5 417 aa9.2□□□□□ -0.94
SSB-212ENST00000494051 SCO2A0A1W2PP80 73 aa9.19□□□□□ -0.94
SSB-212ENST00000494051 FAM221AA4D161 298 aa9.19□□□□□ -0.94
SSB-212ENST00000494051 PRR19A6NJB7 356 aa9.19□□□□□ -0.94
SSB-212ENST00000494051 CILPO75339 1184 aa9.19□□□□□ -0.94
SSB-212ENST00000494051 FAM87AP0C7U9 286 aa9.19□□□□□ -0.94
SSB-212ENST00000494051 GRK4P32298 578 aa9.19□□□□□ -0.94
SSB-212ENST00000494051 EIF4A3P38919 411 aaKnown RBP9.19□□□□□ -0.94
SSB-212ENST00000494051 CYP27A1Q02318 531 aa9.19□□□□□ -0.94
SSB-212ENST00000494051 OGFOD3Q6PK18 319 aa9.19□□□□□ -0.94
SSB-212ENST00000494051 ZNF765Q7L2R6 523 aa9.19□□□□□ -0.94
SSB-212ENST00000494051 KCT2Q8NC54 265 aa9.19□□□□□ -0.94
SSB-212ENST00000494051 ZNF428Q96B54 188 aa9.19□□□□□ -0.94
SSB-212ENST00000494051 METTL22Q9BUU2 404 aaPredicted RBP9.19□□□□□ -0.94
SSB-212ENST00000494051 KRTAP4-7Q9BYR0 210 aa9.19□□□□□ -0.94
SSB-212ENST00000494051 LEMD3Q9Y2U8 911 aa9.19□□□□□ -0.94
SSB-212ENST00000494051 SCAMP3O14828 347 aaKnown RBP9.18□□□□□ -0.94
SSB-212ENST00000494051 FBXL19Q6PCT2 694 aa9.18□□□□□ -0.94
SSB-212ENST00000494051 RNF34Q969K3 372 aa9.18□□□□□ -0.94
SSB-212ENST00000494051 FBRSQ9HAH7 460 aa9.18□□□□□ -0.94
SSB-212ENST00000494051 METTL5Q9NRN9 209 aaKnown RBP9.18□□□□□ -0.94
SSB-212ENST00000494051 PIM2Q9P1W9 311 aa9.18□□□□□ -0.94
SSB-212ENST00000494051 GARTP22102 1010 aa9.17□□□□□ -0.94
SSB-212ENST00000494051 SSTR4P31391 388 aa9.17□□□□□ -0.94
SSB-212ENST00000494051 FBXO27Q8NI29 283 aa9.17□□□□□ -0.94
SSB-212ENST00000494051 ZNF296Q8WUU4 475 aaPredicted RBP9.17□□□□□ -0.94
SSB-212ENST00000494051 LRRC4CQ9HCJ2 640 aa9.17□□□□□ -0.94
SSB-212ENST00000494051 TLR3O15455 904 aaKnown RBP9.16□□□□□ -0.94
SSB-212ENST00000494051 LEFTY1O75610 366 aa9.16□□□□□ -0.94
SSB-212ENST00000494051 PGRP06401 933 aa9.16□□□□□ -0.94
SSB-212ENST00000494051 GRIK1P39086 918 aa9.16□□□□□ -0.94
SSB-212ENST00000494051 CYP27C1Q4G0S4 372 aa9.16□□□□□ -0.94
SSB-212ENST00000494051 ARMCX6Q7L4S7 300 aa9.16□□□□□ -0.94
SSB-212ENST00000494051 KRTAP19-1Q8IUB9 90 aa9.16□□□□□ -0.94
SSB-212ENST00000494051 HID1Q8IV36 788 aa9.16□□□□□ -0.94
SSB-212ENST00000494051 TOP6BLQ8N6T0 577 aa9.16□□□□□ -0.94
SSB-212ENST00000494051 DUSP23Q9BVJ7 150 aa9.16□□□□□ -0.94
SSB-212ENST00000494051 ADAMTS1Q9UHI8 967 aa9.16□□□□□ -0.94
SSB-212ENST00000494051 SUPT16HQ9Y5B9 1047 aaKnown RBP9.16□□□□□ -0.94
SSB-212ENST00000494051 TACC3Q9Y6A5 838 aa9.16□□□□□ -0.94
SSB-212ENST00000494051 CYP26A1O43174 497 aa9.15□□□□□ -0.94
SSB-212ENST00000494051 COBLO75128 1261 aa9.15□□□□□ -0.94
SSB-212ENST00000494051 PDE4BQ07343 736 aa9.15□□□□□ -0.94
SSB-212ENST00000494051 NKG7Q16617 165 aa9.15□□□□□ -0.94
SSB-212ENST00000494051 CPSF6Q16630 551 aaKnown RBP eCLIP9.15□□□□□ -0.942e-8■■■□□ 17.5
SSB-212ENST00000494051 ZNF394Q53GI3 561 aa9.15□□□□□ -0.94
SSB-212ENST00000494051 FAM196AQ6ZSG2 479 aa9.15□□□□□ -0.94
SSB-212ENST00000494051 USP48Q86UV5 1035 aa9.15□□□□□ -0.94
SSB-212ENST00000494051 PCDHGB7Q9Y5F8 929 aa9.15□□□□□ -0.94
SSB-212ENST00000494051 CORINQ9Y5Q5 1042 aa9.15□□□□□ -0.94
SSB-212ENST00000494051 FOSL1P15407 271 aa9.14□□□□□ -0.95
SSB-212ENST00000494051 HOXA10P31260 410 aaPredicted RBP9.14□□□□□ -0.95
SSB-212ENST00000494051 RBM25P49756 843 aaKnown RBP9.14□□□□□ -0.95
SSB-212ENST00000494051 MPP2Q14168 576 aa9.14□□□□□ -0.95
SSB-212ENST00000494051 SLBPQ14493 270 aaKnown RBP eCLIP9.14□□□□□ -0.95
SSB-212ENST00000494051 PRDM10Q9NQV6 1147 aa9.14□□□□□ -0.95
SSB-212ENST00000494051 GRIN3BO60391 1043 aa9.13□□□□□ -0.95
SSB-212ENST00000494051 LRIG2O94898 1065 aa9.13□□□□□ -0.95
SSB-212ENST00000494051 PLCG1P19174 1290 aa9.13□□□□□ -0.95
SSB-212ENST00000494051 C9orf131Q5VYM1 1079 aa9.13□□□□□ -0.95
SSB-212ENST00000494051 INTS5Q6P9B9 1019 aaKnown RBP9.13□□□□□ -0.95
SSB-212ENST00000494051 FOXQ1Q9C009 403 aa9.13□□□□□ -0.95
SSB-212ENST00000494051 KCNQ5Q9NR82 932 aa9.13□□□□□ -0.95
SSB-212ENST00000494051 GREM1O60565 184 aa9.12□□□□□ -0.95
SSB-212ENST00000494051 MED26O95402 600 aa9.12□□□□□ -0.95
SSB-212ENST00000494051 LRP8Q14114 963 aa9.12□□□□□ -0.95
SSB-212ENST00000494051 CWF19L2Q2TBE0 894 aaKnown RBP9.12□□□□□ -0.95
SSB-212ENST00000494051 REC114Q7Z4M0 266 aa9.12□□□□□ -0.95
SSB-212ENST00000494051 XAGE3Q8WTP9 111 aa9.12□□□□□ -0.95
SSB-212ENST00000494051 SPON2Q9BUD6 331 aa9.12□□□□□ -0.95
SSB-212ENST00000494051 PCMTD2Q9NV79 361 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms