RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 SLC9C2Q5TAH2 1124 aa13.21□□□□□ -0.29
RFC4-214ENST00000494047 RESP18Q5W5W9 173 aa13.21□□□□□ -0.29
RFC4-214ENST00000494047 NLRP10Q86W26 655 aa13.21□□□□□ -0.29
RFC4-214ENST00000494047 VPS37DQ86XT2 251 aa13.21□□□□□ -0.29
RFC4-214ENST00000494047 ZNF397Q8NF99 534 aaPredicted RBP13.21□□□□□ -0.29
RFC4-214ENST00000494047 TTLL11Q8NHH1 800 aa13.21□□□□□ -0.29
RFC4-214ENST00000494047 FOXP1Q9H334 677 aaPredicted RBP13.21□□□□□ -0.29
RFC4-214ENST00000494047 SLC12A7Q9Y666 1083 aa13.21□□□□□ -0.29
RFC4-214ENST00000494047 NDUFB9Q9Y6M9 179 aa13.21□□□□□ -0.29
RFC4-214ENST00000494047 ECM29Q5VYK3 1845 aa13.21□□□□□ -0.29
RFC4-214ENST00000494047 GOLGA8AA7E2F4 631 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 SLU7O95391 586 aaKnown RBP13.2□□□□□ -0.3
RFC4-214ENST00000494047 DEXIO95424 95 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 PFKFB1P16118 471 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 GTF2E1P29083 439 aaPredicted RBP13.2□□□□□ -0.3
RFC4-214ENST00000494047 PIP4K2AP48426 406 aaPredicted RBP13.2□□□□□ -0.3
RFC4-214ENST00000494047 ANTXR2P58335 489 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 CCZ1BP86790 482 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 CCZ1P86791 482 aaPredicted RBP13.2□□□□□ -0.3
RFC4-214ENST00000494047 AXDND1Q5T1B0 1012 aaPredicted RBP13.2□□□□□ -0.3
RFC4-214ENST00000494047 ZNF710Q8N1W2 664 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 VGLL2Q8N8G2 317 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 KRI1Q8N9T8 703 aaKnown RBP13.2□□□□□ -0.3
RFC4-214ENST00000494047 ZNF594Q96JF6 807 aaPredicted RBP13.2□□□□□ -0.3
RFC4-214ENST00000494047 CDC5LQ99459 802 aaKnown RBP13.2□□□□□ -0.3
RFC4-214ENST00000494047 NAPBQ9H115 298 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 ARGLU1Q9NWB6 273 aaPredicted RBP13.2□□□□□ -0.3
RFC4-214ENST00000494047 KIF13BQ9NQT8 1826 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 A0A1B0GVL5 298 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 IRS4O14654 1257 aaPredicted RBP13.2□□□□□ -0.3
RFC4-214ENST00000494047 ZBTB22O15209 634 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 SMC2O95347 1197 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 FMNL1O95466 1100 aaPredicted RBP13.2□□□□□ -0.3
RFC4-214ENST00000494047 PDE6AP16499 860 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 TM4SF1P30408 202 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 MCAMP43121 646 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 SEMA3FQ13275 785 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 COL9A3Q14050 684 aaPredicted RBP13.2□□□□□ -0.3
RFC4-214ENST00000494047 PPP4R3BQ5MIZ7 849 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 TAF3Q5VWG9 929 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 NFXL1Q6ZNB6 911 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 MLKLQ8NB16 471 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 NLGN2Q8NFZ4 835 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 STAG1Q8WVM7 1258 aa13.2□□□□□ -0.3
RFC4-214ENST00000494047 JARID2Q92833 1246 aaPredicted RBP13.2□□□□□ -0.3
RFC4-214ENST00000494047 PUS3Q9BZE2 481 aaKnown RBP13.2□□□□□ -0.3
RFC4-214ENST00000494047 PUS7LQ9H0K6 701 aaKnown RBP13.2□□□□□ -0.3
RFC4-214ENST00000494047 SRP68Q9UHB9 627 aaKnown RBP13.2□□□□□ -0.3
RFC4-214ENST00000494047 FOXP2O15409 715 aa13.19□□□□□ -0.3
RFC4-214ENST00000494047 CALM1P0DP23 149 aa13.19□□□□□ -0.3
RFC4-214ENST00000494047 CALM2P0DP24 149 aa13.19□□□□□ -0.3
RFC4-214ENST00000494047 CALM3P0DP25 149 aa13.19□□□□□ -0.3
RFC4-214ENST00000494047 NCBP1Q09161 790 aaKnown RBP13.19□□□□□ -0.3
RFC4-214ENST00000494047 LRMPQ12912 555 aa13.19□□□□□ -0.3
RFC4-214ENST00000494047 CCDC144BQ3MJ40 725 aa13.19□□□□□ -0.3
RFC4-214ENST00000494047 TMEM67Q5HYA8 995 aa13.19□□□□□ -0.3
RFC4-214ENST00000494047 KRT40Q6A162 431 aa13.19□□□□□ -0.3
RFC4-214ENST00000494047 FILIP1Q7Z7B0 1213 aa13.19□□□□□ -0.3
RFC4-214ENST00000494047 CCDC144CPQ8IYA2 1237 aa13.19□□□□□ -0.3
RFC4-214ENST00000494047 FAM177A1Q8N128 213 aaPredicted RBP13.19□□□□□ -0.3
RFC4-214ENST00000494047 L2HGDHQ9H9P8 463 aa13.19□□□□□ -0.3
RFC4-214ENST00000494047 BRMS1Q9HCU9 246 aa13.19□□□□□ -0.3
RFC4-214ENST00000494047 CLIC4Q9Y696 253 aa13.19□□□□□ -0.3
RFC4-214ENST00000494047 BCORQ6W2J9 1755 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 ZNF532Q9HCE3 1301 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 ARHGAP6O43182 974 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 IDH1O75874 414 aaKnown RBP13.18□□□□□ -0.3
RFC4-214ENST00000494047 APPP05067 770 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 ADORA1P30542 326 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 HAND2P61296 217 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 TUBB2AQ13885 445 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 AKNAD1Q5T1N1 836 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 NT5DC1Q5TFE4 455 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 TTLL5Q6EMB2 1281 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 MFSD6Q6ZSS7 791 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 NOSTRINQ8IVI9 506 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 C17orf53Q8N3J3 647 aaPredicted RBP13.18□□□□□ -0.3
RFC4-214ENST00000494047 CNNM3Q8NE01 707 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 TUBB2BQ9BVA1 445 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 ZMYND15Q9H091 742 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 GNL3LQ9NVN8 582 aaKnown RBP13.18□□□□□ -0.3
RFC4-214ENST00000494047 RBM28Q9NW13 759 aaKnown RBP13.18□□□□□ -0.3
RFC4-214ENST00000494047 NRBP1Q9UHY1 535 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 TRMT112Q9UI30 125 aaKnown RBP13.18□□□□□ -0.3
RFC4-214ENST00000494047 C10orf71Q711Q0 1435 aa13.18□□□□□ -0.3
RFC4-214ENST00000494047 SEMA3EO15041 775 aa13.17□□□□□ -0.3
RFC4-214ENST00000494047 ATP8B1O43520 1251 aa13.17□□□□□ -0.3
RFC4-214ENST00000494047 POLR3DP05423 398 aaPredicted RBP13.17□□□□□ -0.3
RFC4-214ENST00000494047 FGFR2P21802 821 aa13.17□□□□□ -0.3
RFC4-214ENST00000494047 ERCC5P28715 1186 aaPredicted RBP13.17□□□□□ -0.3
RFC4-214ENST00000494047 FANCCQ00597 558 aa13.17□□□□□ -0.3
RFC4-214ENST00000494047 GUCY1B3Q02153 619 aa13.17□□□□□ -0.3
RFC4-214ENST00000494047 DMTNQ08495 405 aa13.17□□□□□ -0.3
RFC4-214ENST00000494047 DPCR1Q3MIW9 517 aa13.17□□□□□ -0.3
RFC4-214ENST00000494047 CCDC152Q4G0S7 254 aa13.17□□□□□ -0.3
RFC4-214ENST00000494047 CLEC4GQ6UXB4 293 aa13.17□□□□□ -0.3
RFC4-214ENST00000494047 SPATA5Q8NB90 893 aa13.17□□□□□ -0.3
RFC4-214ENST00000494047 FAM89AQ96GI7 184 aa13.17□□□□□ -0.3
RFC4-214ENST00000494047 CTAGE1Q96RT6 745 aa13.17□□□□□ -0.3
RFC4-214ENST00000494047 STRBPQ96SI9 672 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms