RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ATP8A2Q9NTI2 1148 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 TFIP11Q9UBB9 837 aaKnown RBP12.43□□□□□ -0.42
CLCN6-208ENST00000494028 POLLQ9UGP5 575 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 SLC12A7Q9Y666 1083 aa12.43□□□□□ -0.42
CLCN6-208ENST00000494028 GAKO14976 1311 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 USP17L12C9JPN9 530 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 USP17L21D6R901 530 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 FMNL1O95466 1100 aaPredicted RBP12.42□□□□□ -0.42
CLCN6-208ENST00000494028 NPR1P16066 1061 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 IFNAR1P17181 557 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 BAG6P46379 1132 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 GSTO1P78417 241 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 DIXDC1Q155Q3 683 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 TPRNQ4KMQ1 711 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 MSL1Q68DK7 614 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 ATL3Q6DD88 541 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 SP8Q8IXZ3 490 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 SH3RF3Q8TEJ3 882 aaPredicted RBP12.42□□□□□ -0.42
CLCN6-208ENST00000494028 PHKBQ93100 1093 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 ZNF396Q96N95 335 aaPredicted RBP12.42□□□□□ -0.42
CLCN6-208ENST00000494028 UBAC1Q9BSL1 405 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 GJB4Q9NTQ9 266 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
CLCN6-208ENST00000494028 ATP6V0A2Q9Y487 856 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 C10orf71Q711Q0 1435 aa12.42□□□□□ -0.42
CLCN6-208ENST00000494028 ERICH2A1L162 156 aa12.41□□□□□ -0.42
CLCN6-208ENST00000494028 BRAPQ7Z569 592 aa12.41□□□□□ -0.42
CLCN6-208ENST00000494028 KLHL34Q8N239 644 aa12.41□□□□□ -0.42
CLCN6-208ENST00000494028 ENAHQ8N8S7 591 aaPredicted RBP12.41□□□□□ -0.42
CLCN6-208ENST00000494028 CFAP45Q9UL16 551 aa12.41□□□□□ -0.42
CLCN6-208ENST00000494028 UBE2Q2LH0YL09 131 aa12.4□□□□□ -0.42
CLCN6-208ENST00000494028 PRDM1O75626 825 aa12.4□□□□□ -0.42
CLCN6-208ENST00000494028 IARSP41252 1262 aaKnown RBP12.4□□□□□ -0.42
CLCN6-208ENST00000494028 BTDP43251 543 aa12.4□□□□□ -0.42
CLCN6-208ENST00000494028 PPP4CP60510 307 aa12.4□□□□□ -0.42
CLCN6-208ENST00000494028 MYSM1Q5VVJ2 828 aa12.4□□□□□ -0.42
CLCN6-208ENST00000494028 KRT40Q6A162 431 aa12.4□□□□□ -0.42
CLCN6-208ENST00000494028 NBPF11Q86T75 865 aa12.4□□□□□ -0.42
CLCN6-208ENST00000494028 BICD2Q8TD16 824 aa12.4□□□□□ -0.42
CLCN6-208ENST00000494028 ZSCAN10Q96SZ4 725 aaPredicted RBP12.4□□□□□ -0.42
CLCN6-208ENST00000494028 SLC26A6Q9BXS9 759 aa12.4□□□□□ -0.42
CLCN6-208ENST00000494028 NUP62CLQ9H1M0 184 aa12.4□□□□□ -0.42
CLCN6-208ENST00000494028 CLSTN2Q9H4D0 955 aa12.4□□□□□ -0.42
CLCN6-208ENST00000494028 DDX19AQ9NUU7 478 aaKnown RBP12.4□□□□□ -0.42
CLCN6-208ENST00000494028 RCOR1Q9UKL0 485 aa12.4□□□□□ -0.42
CLCN6-208ENST00000494028 PARP3Q9Y6F1 533 aa12.4□□□□□ -0.42
CLCN6-208ENST00000494028 CNTNAP5Q8WYK1 1306 aa12.39□□□□□ -0.43
CLCN6-208ENST00000494028 ARFGEF1Q9Y6D6 1849 aa12.39□□□□□ -0.43
CLCN6-208ENST00000494028 DDAH1O94760 285 aa12.39□□□□□ -0.43
CLCN6-208ENST00000494028 LETM1O95202 739 aaPredicted RBP12.39□□□□□ -0.43
CLCN6-208ENST00000494028 YEATS4O95619 227 aa12.39□□□□□ -0.43
CLCN6-208ENST00000494028 USP17L8P0C7I0 530 aa12.39□□□□□ -0.43
CLCN6-208ENST00000494028 PDE6BP35913 854 aa12.39□□□□□ -0.43
CLCN6-208ENST00000494028 CCDC173Q0VFZ6 552 aa12.39□□□□□ -0.43
CLCN6-208ENST00000494028 SYNE3Q6ZMZ3 975 aa12.39□□□□□ -0.43
CLCN6-208ENST00000494028 TMTC2Q8N394 836 aa12.39□□□□□ -0.43
CLCN6-208ENST00000494028 TBC1D22AQ8WUA7 517 aa12.39□□□□□ -0.43
CLCN6-208ENST00000494028 PPP1R9BQ96SB3 815 aa12.39□□□□□ -0.43
CLCN6-208ENST00000494028 GOLPH3LQ9H4A5 285 aa12.39□□□□□ -0.43
CLCN6-208ENST00000494028 RTEL1Q9NZ71 1219 aa12.39□□□□□ -0.43
CLCN6-208ENST00000494028 C6orf229H3BNL8 230 aa12.38□□□□□ -0.43
CLCN6-208ENST00000494028 LDHCP07864 332 aa12.38□□□□□ -0.43
CLCN6-208ENST00000494028 USP5P45974 858 aa12.38□□□□□ -0.43
CLCN6-208ENST00000494028 NT5C2P49902 561 aa12.38□□□□□ -0.43
CLCN6-208ENST00000494028 CEBPZQ03701 1054 aaKnown RBP12.38□□□□□ -0.43
CLCN6-208ENST00000494028 SSRP1Q08945 709 aaKnown RBP12.38□□□□□ -0.43
CLCN6-208ENST00000494028 SF3B2Q13435 895 aaKnown RBP12.38□□□□□ -0.43
CLCN6-208ENST00000494028 MFSD14BQ5SR56 506 aa12.38□□□□□ -0.43
CLCN6-208ENST00000494028 IFIT1BQ5T764 474 aaKnown RBP12.38□□□□□ -0.43
CLCN6-208ENST00000494028 C12orf60Q5U649 245 aa12.38□□□□□ -0.43
CLCN6-208ENST00000494028 OLFM4Q6UX06 510 aa12.38□□□□□ -0.43
CLCN6-208ENST00000494028 RBM43Q6ZSC3 357 aaKnown RBP12.38□□□□□ -0.43
CLCN6-208ENST00000494028 IQCA1Q86XH1 822 aa12.38□□□□□ -0.43
CLCN6-208ENST00000494028 CERS3Q8IU89 383 aa12.38□□□□□ -0.43
CLCN6-208ENST00000494028 MASTLQ96GX5 879 aa12.38□□□□□ -0.43
CLCN6-208ENST00000494028 NOL10Q9BSC4 688 aaKnown RBP12.38□□□□□ -0.43
CLCN6-208ENST00000494028 COA1Q9GZY4 146 aa12.38□□□□□ -0.43
CLCN6-208ENST00000494028 POLR3EQ9NVU0 708 aa12.38□□□□□ -0.43
CLCN6-208ENST00000494028 MCM9Q9NXL9 1143 aa12.38□□□□□ -0.43
CLCN6-208ENST00000494028 DACT1Q9NYF0 836 aa12.38□□□□□ -0.43
CLCN6-208ENST00000494028 FLT1P17948 1338 aa12.37□□□□□ -0.43
CLCN6-208ENST00000494028 GPR75-ASB3A0A0A6YYF3 556 aa12.37□□□□□ -0.43
CLCN6-208ENST00000494028 CCDC196A0A1B0GTZ2 297 aa12.37□□□□□ -0.43
CLCN6-208ENST00000494028 SOCS7O14512 581 aa12.37□□□□□ -0.43
CLCN6-208ENST00000494028 DEXIO95424 95 aa12.37□□□□□ -0.43
CLCN6-208ENST00000494028 BAG3O95817 575 aa12.37□□□□□ -0.43
CLCN6-208ENST00000494028 SLC3A2P08195 630 aaKnown RBP12.37□□□□□ -0.43
CLCN6-208ENST00000494028 GUCY1A2P33402 732 aa12.37□□□□□ -0.43
CLCN6-208ENST00000494028 RHBDL3P58872 404 aa12.37□□□□□ -0.43
CLCN6-208ENST00000494028 FUT2Q10981 343 aa12.37□□□□□ -0.43
CLCN6-208ENST00000494028 RNF214Q8ND24 703 aa12.37□□□□□ -0.43
CLCN6-208ENST00000494028 NUP133Q8WUM0 1156 aa12.37□□□□□ -0.43
CLCN6-208ENST00000494028 WASF1Q92558 559 aa12.37□□□□□ -0.43
CLCN6-208ENST00000494028 RNF26Q9BY78 433 aaPredicted RBP12.37□□□□□ -0.43
CLCN6-208ENST00000494028 BRCA1P38398 1863 aaKnown RBP12.37□□□□□ -0.43
CLCN6-208ENST00000494028 PLIN4Q96Q06 1357 aa12.36□□□□□ -0.43
CLCN6-208ENST00000494028 GOLGA6L4A6NEF3 574 aa12.36□□□□□ -0.43
CLCN6-208ENST00000494028 NR1I2O75469 434 aa12.36□□□□□ -0.43
CLCN6-208ENST00000494028 PLEKHA8P1O95397 391 aa12.36□□□□□ -0.43
CLCN6-208ENST00000494028 PDE4BQ07343 736 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms