RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 IQCA1LA6NCM1 817 aa6.08□□□□□ -1.44
GTF3A-208ENST00000493903 TM4SF20Q53R12 229 aa6.08□□□□□ -1.44
GTF3A-208ENST00000493903 PODNQ7Z5L7 613 aa6.08□□□□□ -1.44
GTF3A-208ENST00000493903 PDZD3Q86UT5 571 aa6.08□□□□□ -1.44
GTF3A-208ENST00000493903 LRRC47Q8N1G4 583 aaKnown RBP6.08□□□□□ -1.44
GTF3A-208ENST00000493903 BEND7Q8N7W2 519 aaPredicted RBP6.08□□□□□ -1.44
GTF3A-208ENST00000493903 GRIN3AQ8TCU5 1115 aa6.08□□□□□ -1.44
GTF3A-208ENST00000493903 STK35Q8TDR2 534 aa6.08□□□□□ -1.44
GTF3A-208ENST00000493903 CHAC2Q8WUX2 184 aa6.08□□□□□ -1.44
GTF3A-208ENST00000493903 MFSD3Q96ES6 412 aa6.08□□□□□ -1.44
GTF3A-208ENST00000493903 SLC52A1Q9NWF4 448 aa6.08□□□□□ -1.44
GTF3A-208ENST00000493903 GEMIN8Q9NWZ8 242 aaKnown RBP6.08□□□□□ -1.44
GTF3A-208ENST00000493903 SLC6A14Q9UN76 642 aa6.08□□□□□ -1.44
GTF3A-208ENST00000493903 G3BP2Q9UN86 482 aaKnown RBP6.08□□□□□ -1.44
GTF3A-208ENST00000493903 STARD13Q9Y3M8 1113 aa6.08□□□□□ -1.44
GTF3A-208ENST00000493903 CD2APQ9Y5K6 639 aa6.08□□□□□ -1.44
GTF3A-208ENST00000493903 TACC3Q9Y6A5 838 aa6.08□□□□□ -1.44
GTF3A-208ENST00000493903 FAM177BA6PVY3 158 aa6.07□□□□□ -1.44
GTF3A-208ENST00000493903 RNF225M0QZC1 329 aaPredicted RBP6.07□□□□□ -1.44
GTF3A-208ENST00000493903 KCNQ2O43526 872 aa6.07□□□□□ -1.44
GTF3A-208ENST00000493903 RFPL3O75679 317 aa6.07□□□□□ -1.44
GTF3A-208ENST00000493903 ALBP02768 609 aa6.07□□□□□ -1.44
GTF3A-208ENST00000493903 ESRRAP11474 423 aaPredicted RBP6.07□□□□□ -1.44
GTF3A-208ENST00000493903 GSK3AP49840 483 aa6.07□□□□□ -1.44
GTF3A-208ENST00000493903 MLLT1Q03111 559 aaPredicted RBP6.07□□□□□ -1.44
GTF3A-208ENST00000493903 ODR4Q5SWX8 454 aa6.07□□□□□ -1.44
GTF3A-208ENST00000493903 CEP135Q66GS9 1140 aa6.07□□□□□ -1.44
GTF3A-208ENST00000493903 MRM1Q6IN84 353 aaKnown RBP6.07□□□□□ -1.44
GTF3A-208ENST00000493903 RUFY4Q6ZNE9 571 aa6.07□□□□□ -1.44
GTF3A-208ENST00000493903 CACTIN-AS1Q8N1I8 211 aa6.07□□□□□ -1.44
GTF3A-208ENST00000493903 ZBTB38Q8NAP3 1195 aaPredicted RBP6.07□□□□□ -1.44
GTF3A-208ENST00000493903 JDP2Q8WYK2 163 aa6.07□□□□□ -1.44
GTF3A-208ENST00000493903 NINJ1Q92982 152 aa6.07□□□□□ -1.44
GTF3A-208ENST00000493903 SPATA9Q9BWV2 254 aa6.07□□□□□ -1.44
GTF3A-208ENST00000493903 PHAXQ9H814 394 aaKnown RBP6.07□□□□□ -1.44
GTF3A-208ENST00000493903 NAGPAQ9UK23 515 aa6.07□□□□□ -1.44
GTF3A-208ENST00000493903 MKL2Q9ULH7 1088 aa6.07□□□□□ -1.44
GTF3A-208ENST00000493903 ATP8A1Q9Y2Q0 1164 aa6.07□□□□□ -1.44
GTF3A-208ENST00000493903 RIPOR2Q9Y4F9 1068 aa6.07□□□□□ -1.44
GTF3A-208ENST00000493903 CCDC194A0A1B0GVG4 234 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 UPK3BL1B0FP48 263 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 B2RBV5 119 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 UPK3BL2E5RIL1 263 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 M0R082 166 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 GRIN3BO60391 1043 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 HTR3BO95264 441 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 EIF2AK2P19525 551 aaKnown RBP6.06□□□□□ -1.44
GTF3A-208ENST00000493903 PMLP29590 882 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 STAT3P40763 770 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 HNRNPUQ00839 825 aaKnown RBP eCLIP6.06□□□□□ -1.44
GTF3A-208ENST00000493903 EXOSC10Q01780 885 aaKnown RBP6.06□□□□□ -1.44
GTF3A-208ENST00000493903 PTPN11Q06124 597 aaPredicted RBP6.06□□□□□ -1.44
GTF3A-208ENST00000493903 ADAMTSL4Q6UY14 1074 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 LINC00114Q6XXX2 140 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 C8orf86Q6ZUL3 223 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 HFE2Q6ZVN8 426 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 NIM1KQ8IY84 436 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 MICALL1Q8N3F8 863 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 ZNF417Q8TAU3 575 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 SGSM3Q96HU1 749 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 CCDC136Q96JN2 1154 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 ZNF587Q96SQ5 575 aaPredicted RBP6.06□□□□□ -1.44
GTF3A-208ENST00000493903 PSMD1Q99460 953 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 IER2Q9BTL4 223 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 SOX17Q9H6I2 414 aaPredicted RBP6.06□□□□□ -1.44
GTF3A-208ENST00000493903 CAAP1Q9H8G2 361 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 GMIPQ9P107 970 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 SNCAIPQ9Y6H5 919 aa6.06□□□□□ -1.44
GTF3A-208ENST00000493903 ALG1L2C9J202 215 aa6.05□□□□□ -1.44
GTF3A-208ENST00000493903 GFRA2O00451 464 aa6.05□□□□□ -1.44
GTF3A-208ENST00000493903 GSTP1P09211 210 aaKnown RBP6.05□□□□□ -1.44
GTF3A-208ENST00000493903 FAM153BP0C7A2 387 aa6.05□□□□□ -1.44
GTF3A-208ENST00000493903 CNGA1P29973 690 aa6.05□□□□□ -1.44
GTF3A-208ENST00000493903 KCNMA1Q12791 1236 aa6.05□□□□□ -1.44
GTF3A-208ENST00000493903 VHLLQ6RSH7 139 aa6.05□□□□□ -1.44
GTF3A-208ENST00000493903 FAM35AQ86V20 835 aa6.05□□□□□ -1.44
GTF3A-208ENST00000493903 THNSL2Q86YJ6 484 aa6.05□□□□□ -1.44
GTF3A-208ENST00000493903 FMNL3Q8IVF7 1028 aa6.05□□□□□ -1.44
GTF3A-208ENST00000493903 CCAR1Q8IX12 1150 aaKnown RBP6.05□□□□□ -1.44
GTF3A-208ENST00000493903 RELTQ969Z4 430 aa6.05□□□□□ -1.44
GTF3A-208ENST00000493903 MYH16Q9H6N6 1097 aa6.05□□□□□ -1.44
GTF3A-208ENST00000493903 GNB5O14775 395 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 TNFRSF10CO14798 259 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 TPD52L2O43399 206 aaKnown RBP6.04□□□□□ -1.44
GTF3A-208ENST00000493903 ADCY3O60266 1144 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 SUSD5O60279 629 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 CPB1P15086 417 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 NME1P15531 152 aaKnown RBP6.04□□□□□ -1.44
GTF3A-208ENST00000493903 SOX5P35711 763 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 CABP4P57796 275 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 RASSF7Q02833 373 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 IKBKEQ14164 716 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 CDCP2Q5VXM1 449 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 UNC5AQ6ZN44 842 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 C20orf204Q6ZNR8 217 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 NUDT8Q8WV74 236 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 ANTXR1Q9H6X2 564 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 KRT82Q9NSB4 513 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 FRRS1LQ9P0K9 344 aa6.04□□□□□ -1.44
GTF3A-208ENST00000493903 MCM8Q9UJA3 840 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms