RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 ADAM30Q9UKF2 790 aa7.42□□□□□ -1.22
ITGB1-216ENST00000493758 PRR36Q9H6K5 1346 aa7.42□□□□□ -1.22
ITGB1-216ENST00000493758 LOC100996750A0A140TA64 210 aa7.41□□□□□ -1.22
ITGB1-216ENST00000493758 WDR64B1ANS9 1081 aa7.41□□□□□ -1.22
ITGB1-216ENST00000493758 COBLO75128 1261 aa7.41□□□□□ -1.22
ITGB1-216ENST00000493758 PF4P02776 101 aa7.41□□□□□ -1.22
ITGB1-216ENST00000493758 SPINK2P20155 84 aa7.41□□□□□ -1.22
ITGB1-216ENST00000493758 GBP2P32456 591 aaPredicted RBP7.41□□□□□ -1.22
ITGB1-216ENST00000493758 ZNF76P36508 570 aa7.41□□□□□ -1.22
ITGB1-216ENST00000493758 MPP2Q14168 576 aa7.41□□□□□ -1.22
ITGB1-216ENST00000493758 MSMPQ1L6U9 139 aa7.41□□□□□ -1.22
ITGB1-216ENST00000493758 FAM196AQ6ZSG2 479 aa7.41□□□□□ -1.22
ITGB1-216ENST00000493758 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.41□□□□□ -1.22
ITGB1-216ENST00000493758 OSBPL1AQ9BXW6 950 aa7.41□□□□□ -1.22
ITGB1-216ENST00000493758 KRTAP4-6Q9BYQ5 205 aa7.41□□□□□ -1.22
ITGB1-216ENST00000493758 KIAA1522Q9P206 1035 aaPredicted RBP7.41□□□□□ -1.22
ITGB1-216ENST00000493758 ROBO2Q9HCK4 1378 aa7.41□□□□□ -1.22
ITGB1-216ENST00000493758 PRAMEF27A3QJZ7 478 aa7.4□□□□□ -1.22
ITGB1-216ENST00000493758 FAM170BA6NMN3 283 aa7.4□□□□□ -1.22
ITGB1-216ENST00000493758 SCAMP3O14828 347 aaKnown RBP7.4□□□□□ -1.22
ITGB1-216ENST00000493758 GREM1O60565 184 aa7.4□□□□□ -1.22
ITGB1-216ENST00000493758 RNGTTO60942 597 aaKnown RBP7.4□□□□□ -1.22
ITGB1-216ENST00000493758 LRIG2O94898 1065 aa7.4□□□□□ -1.22
ITGB1-216ENST00000493758 CDK8P49336 464 aa7.4□□□□□ -1.22
ITGB1-216ENST00000493758 BNC2Q6ZN30 1099 aaPredicted RBP7.4□□□□□ -1.22
ITGB1-216ENST00000493758 ZNF765Q7L2R6 523 aa7.4□□□□□ -1.22
ITGB1-216ENST00000493758 UBE3DQ7Z6J8 389 aa7.4□□□□□ -1.22
ITGB1-216ENST00000493758 MRPL41Q8IXM3 137 aaKnown RBP7.4□□□□□ -1.22
ITGB1-216ENST00000493758 FBXL6Q8N531 539 aa7.4□□□□□ -1.22
ITGB1-216ENST00000493758 TMEM87AQ8NBN3 555 aa7.4□□□□□ -1.22
ITGB1-216ENST00000493758 MRRFQ96E11 262 aaKnown RBP7.4□□□□□ -1.22
ITGB1-216ENST00000493758 DUSP23Q9BVJ7 150 aa7.4□□□□□ -1.22
ITGB1-216ENST00000493758 MKNK2Q9HBH9 465 aa7.4□□□□□ -1.22
ITGB1-216ENST00000493758 COPRSQ9NQ92 184 aa7.4□□□□□ -1.22
ITGB1-216ENST00000493758 GGT7Q9UJ14 662 aa7.4□□□□□ -1.22
ITGB1-216ENST00000493758 F13A1P00488 732 aa7.39□□□□□ -1.23
ITGB1-216ENST00000493758 CDK5R2Q13319 367 aa7.39□□□□□ -1.23
ITGB1-216ENST00000493758 SLBPQ14493 270 aaKnown RBP eCLIP7.39□□□□□ -1.23
ITGB1-216ENST00000493758 CYP27C1Q4G0S4 372 aa7.39□□□□□ -1.23
ITGB1-216ENST00000493758 ARMCX6Q7L4S7 300 aa7.39□□□□□ -1.23
ITGB1-216ENST00000493758 DTX1Q86Y01 620 aa7.39□□□□□ -1.23
ITGB1-216ENST00000493758 HID1Q8IV36 788 aa7.39□□□□□ -1.23
ITGB1-216ENST00000493758 SHISA5Q8N114 240 aa7.39□□□□□ -1.23
ITGB1-216ENST00000493758 PICK1Q9NRD5 415 aa7.39□□□□□ -1.23
ITGB1-216ENST00000493758 LEMD3Q9Y2U8 911 aa7.39□□□□□ -1.23
ITGB1-216ENST00000493758 SUPT16HQ9Y5B9 1047 aaKnown RBP7.39□□□□□ -1.23
ITGB1-216ENST00000493758 CSADQ9Y600 493 aa7.39□□□□□ -1.23
ITGB1-216ENST00000493758 UNCXA6NJT0 531 aa7.38□□□□□ -1.23
ITGB1-216ENST00000493758 BPNT1O95861 308 aa7.38□□□□□ -1.23
ITGB1-216ENST00000493758 PRNPP04156 253 aa7.38□□□□□ -1.23
ITGB1-216ENST00000493758 EIF4A3P38919 411 aaKnown RBP7.38□□□□□ -1.23
ITGB1-216ENST00000493758 PDE4BQ07343 736 aa7.38□□□□□ -1.23
ITGB1-216ENST00000493758 TMEM201Q5SNT2 666 aa7.38□□□□□ -1.23
ITGB1-216ENST00000493758 SNAP47Q5SQN1 464 aa7.38□□□□□ -1.23
ITGB1-216ENST00000493758 DUSP27Q5VZP5 1158 aa7.38□□□□□ -1.23
ITGB1-216ENST00000493758 REC114Q7Z4M0 266 aa7.38□□□□□ -1.23
ITGB1-216ENST00000493758 Q8N3U1 123 aa7.38□□□□□ -1.23
ITGB1-216ENST00000493758 FBRSQ9HAH7 460 aa7.38□□□□□ -1.23
ITGB1-216ENST00000493758 FAM87AP0C7U9 286 aa7.37□□□□□ -1.23
ITGB1-216ENST00000493758 GRK4P32298 578 aa7.37□□□□□ -1.23
ITGB1-216ENST00000493758 ETF1P62495 437 aaKnown RBP7.37□□□□□ -1.23
ITGB1-216ENST00000493758 FBXL19Q6PCT2 694 aa7.37□□□□□ -1.23
ITGB1-216ENST00000493758 CDC37L1Q7L3B6 337 aa7.37□□□□□ -1.23
ITGB1-216ENST00000493758 GOLM1Q8NBJ4 401 aa7.37□□□□□ -1.23
ITGB1-216ENST00000493758 SSU72Q9NP77 194 aaKnown RBP7.37□□□□□ -1.23
ITGB1-216ENST00000493758 PRDM10Q9NQV6 1147 aa7.37□□□□□ -1.23
ITGB1-216ENST00000493758 F6X3S4 739 aa7.36□□□□□ -1.23
ITGB1-216ENST00000493758 IGF2BP3O00425 579 aaKnown RBP eCLIP7.36□□□□□ -1.23
ITGB1-216ENST00000493758 CST3P01034 146 aaPredicted RBP7.36□□□□□ -1.23
ITGB1-216ENST00000493758 C22orf34Q6ZV56 151 aa7.36□□□□□ -1.23
ITGB1-216ENST00000493758 FAM214BQ7L5A3 538 aa7.36□□□□□ -1.23
ITGB1-216ENST00000493758 METTL16Q86W50 562 aaKnown RBP7.36□□□□□ -1.23
ITGB1-216ENST00000493758 MFSD2AQ8NA29 543 aa7.36□□□□□ -1.23
ITGB1-216ENST00000493758 RNF34Q969K3 372 aa7.36□□□□□ -1.23
ITGB1-216ENST00000493758 FOXQ1Q9C009 403 aa7.36□□□□□ -1.23
ITGB1-216ENST00000493758 ZFP64Q9NPA5 681 aa7.36□□□□□ -1.23
ITGB1-216ENST00000493758 ADAMTS1Q9UHI8 967 aa7.36□□□□□ -1.23
ITGB1-216ENST00000493758 HYAL3O43820 417 aaPredicted RBP7.35□□□□□ -1.23
ITGB1-216ENST00000493758 FAM160A1Q05DH4 1040 aa7.35□□□□□ -1.23
ITGB1-216ENST00000493758 NKG7Q16617 165 aa7.35□□□□□ -1.23
ITGB1-216ENST00000493758 CWF19L2Q2TBE0 894 aaKnown RBP7.35□□□□□ -1.23
ITGB1-216ENST00000493758 SLC6A19Q695T7 634 aa7.35□□□□□ -1.23
ITGB1-216ENST00000493758 MCATQ8IVS2 390 aaKnown RBP7.35□□□□□ -1.23
ITGB1-216ENST00000493758 TOP6BLQ8N6T0 577 aa7.35□□□□□ -1.23
ITGB1-216ENST00000493758 JARID2Q92833 1246 aaPredicted RBP7.35□□□□□ -1.23
ITGB1-216ENST00000493758 NT5C1AQ9BXI3 368 aa7.35□□□□□ -1.23
ITGB1-216ENST00000493758 MAPK8IP1Q9UQF2 711 aa7.35□□□□□ -1.23
ITGB1-216ENST00000493758 POLR3KQ9Y2Y1 108 aaPredicted RBP7.35□□□□□ -1.23
ITGB1-216ENST00000493758 SCO2A0A1W2PP80 73 aa7.34□□□□□ -1.23
ITGB1-216ENST00000493758 CYP26A1O43174 497 aa7.34□□□□□ -1.23
ITGB1-216ENST00000493758 ATE1O95260 518 aa7.34□□□□□ -1.23
ITGB1-216ENST00000493758 MED26O95402 600 aa7.34□□□□□ -1.23
ITGB1-216ENST00000493758 PGRP06401 933 aa7.34□□□□□ -1.23
ITGB1-216ENST00000493758 SLFN12Q8IYM2 578 aa7.34□□□□□ -1.23
ITGB1-216ENST00000493758 ZNF296Q8WUU4 475 aaPredicted RBP7.34□□□□□ -1.23
ITGB1-216ENST00000493758 TMEM87BQ96K49 555 aa7.34□□□□□ -1.23
ITGB1-216ENST00000493758 COX4I2Q96KJ9 171 aa7.34□□□□□ -1.23
ITGB1-216ENST00000493758 TJP2Q9UDY2 1190 aa7.34□□□□□ -1.23
ITGB1-216ENST00000493758 MINDY4BA8MYZ0 360 aa7.33□□□□□ -1.24
ITGB1-216ENST00000493758 LEFTY1O75610 366 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms