RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 R3HDMLQ9H3Y0 253 aa14.99□□□□□ -0.01
UPF3A-210ENST00000493727 BICC1Q9H694 974 aaKnown RBP14.99□□□□□ -0.01
UPF3A-210ENST00000493727 PLA2G2EQ9NZK7 142 aa14.99□□□□□ -0.01
UPF3A-210ENST00000493727 COL1A1P02452 1464 aaPredicted RBP14.99□□□□□ -0.01
UPF3A-210ENST00000493727 SSC5DA1L4H1 1573 aa14.98□□□□□ -0.01
UPF3A-210ENST00000493727 HMMRO75330 724 aa14.98□□□□□ -0.01
UPF3A-210ENST00000493727 NR1I2O75469 434 aa14.98□□□□□ -0.01
UPF3A-210ENST00000493727 SASH1O94885 1247 aa14.98□□□□□ -0.01
UPF3A-210ENST00000493727 PTPN12Q05209 780 aaKnown RBP14.98□□□□□ -0.01
UPF3A-210ENST00000493727 SREBF2Q12772 1141 aa14.98□□□□□ -0.01
UPF3A-210ENST00000493727 LDLRAD1Q5T700 205 aa14.98□□□□□ -0.01
UPF3A-210ENST00000493727 CEP85Q6P2H3 762 aa14.98□□□□□ -0.01
UPF3A-210ENST00000493727 LMBR1LQ6UX01 489 aa14.98□□□□□ -0.01
UPF3A-210ENST00000493727 KIAA0825Q8IV33 1275 aa14.98□□□□□ -0.01
UPF3A-210ENST00000493727 SLC27A5Q9Y2P5 690 aa14.98□□□□□ -0.01
UPF3A-210ENST00000493727 PCDHB15Q9Y5E8 787 aa14.98□□□□□ -0.01
UPF3A-210ENST00000493727 FKTNO75072 461 aa14.97□□□□□ -0.01
UPF3A-210ENST00000493727 KLRK1P26718 216 aa14.97□□□□□ -0.01
UPF3A-210ENST00000493727 FKBP1AP62942 108 aaKnown RBP14.97□□□□□ -0.01
UPF3A-210ENST00000493727 DIXDC1Q155Q3 683 aa14.97□□□□□ -0.01
UPF3A-210ENST00000493727 LDHAL6AQ6ZMR3 332 aa14.97□□□□□ -0.01
UPF3A-210ENST00000493727 ARMC9Q7Z3E5 817 aa14.97□□□□□ -0.01
UPF3A-210ENST00000493727 RPAP2Q8IXW5 612 aaPredicted RBP14.97□□□□□ -0.01
UPF3A-210ENST00000493727 ANKRD44Q8N8A2 993 aa14.97□□□□□ -0.01
UPF3A-210ENST00000493727 CNNM1Q9NRU3 951 aa14.97□□□□□ -0.01
UPF3A-210ENST00000493727 MOXD2PA6NHM9 499 aa14.96□□□□□ -0.01
UPF3A-210ENST00000493727 SRGAP3O43295 1099 aa14.96□□□□□ -0.01
UPF3A-210ENST00000493727 TAF5LO75529 589 aa14.96□□□□□ -0.01
UPF3A-210ENST00000493727 IL1R1P14778 569 aa14.96□□□□□ -0.01
UPF3A-210ENST00000493727 DLGAP5Q15398 846 aa14.96□□□□□ -0.01
UPF3A-210ENST00000493727 EPHA10Q5JZY3 1008 aa14.96□□□□□ -0.01
UPF3A-210ENST00000493727 SPRYD7Q5W111 196 aa14.96□□□□□ -0.01
UPF3A-210ENST00000493727 B4GALNT3Q6L9W6 998 aa14.96□□□□□ -0.01
UPF3A-210ENST00000493727 RWDD1Q9H446 243 aaPredicted RBP14.96□□□□□ -0.01
UPF3A-210ENST00000493727 OTOFQ9HC10 1997 aa14.96□□□□□ -0.01
UPF3A-210ENST00000493727 IRS2Q9Y4H2 1338 aa14.95□□□□□ -0.02
UPF3A-210ENST00000493727 MYO1BO43795 1136 aa14.95□□□□□ -0.02
UPF3A-210ENST00000493727 NDUFV2P19404 249 aa14.95□□□□□ -0.02
UPF3A-210ENST00000493727 GUCA2AQ02747 115 aa14.95□□□□□ -0.02
UPF3A-210ENST00000493727 MTMR14Q8NCE2 650 aa14.95□□□□□ -0.02
UPF3A-210ENST00000493727 HELBQ8NG08 1087 aaPredicted RBP14.95□□□□□ -0.02
UPF3A-210ENST00000493727 ATP8B2P98198 1209 aa14.94□□□□□ -0.02
UPF3A-210ENST00000493727 UBE4AQ14139 1066 aa14.94□□□□□ -0.02
UPF3A-210ENST00000493727 MAP3K11Q16584 847 aa14.94□□□□□ -0.02
UPF3A-210ENST00000493727 MYSM1Q5VVJ2 828 aa14.94□□□□□ -0.02
UPF3A-210ENST00000493727 KAZALD1Q96I82 304 aa14.94□□□□□ -0.02
UPF3A-210ENST00000493727 FZD1Q9UP38 647 aa14.94□□□□□ -0.02
UPF3A-210ENST00000493727 PPP2R3BQ9Y5P8 575 aa14.94□□□□□ -0.02
UPF3A-210ENST00000493727 CEP290O15078 2479 aa14.94□□□□□ -0.02
UPF3A-210ENST00000493727 ARAP2Q8WZ64 1704 aa14.93□□□□□ -0.02
UPF3A-210ENST00000493727 PNMA6EA0A0J9YXQ4 647 aa14.93□□□□□ -0.02
UPF3A-210ENST00000493727 ALDH1A1P00352 501 aa14.93□□□□□ -0.02
UPF3A-210ENST00000493727 HDAC1Q13547 482 aaPredicted RBP14.93□□□□□ -0.02
UPF3A-210ENST00000493727 PRKG1Q13976 671 aa14.93□□□□□ -0.02
UPF3A-210ENST00000493727 RABL6Q3YEC7 729 aaPredicted RBP14.93□□□□□ -0.02
UPF3A-210ENST00000493727 THAP11Q96EK4 314 aa14.93□□□□□ -0.02
UPF3A-210ENST00000493727 ZNF594Q96JF6 807 aaPredicted RBP14.93□□□□□ -0.02
UPF3A-210ENST00000493727 ANGEL1Q9UNK9 670 aaKnown RBP14.93□□□□□ -0.02
UPF3A-210ENST00000493727 MANSC4A6NHS7 340 aaPredicted RBP14.92□□□□□ -0.02
UPF3A-210ENST00000493727 SNAP23O00161 211 aa14.92□□□□□ -0.02
UPF3A-210ENST00000493727 ZBTB48P10074 688 aaPredicted RBP14.92□□□□□ -0.02
UPF3A-210ENST00000493727 MTX1Q13505 466 aa14.92□□□□□ -0.02
UPF3A-210ENST00000493727 OTOP1Q7RTM1 612 aa14.92□□□□□ -0.02
UPF3A-210ENST00000493727 CERS5Q8N5B7 392 aa14.92□□□□□ -0.02
UPF3A-210ENST00000493727 NKX2-3Q8TAU0 364 aa14.92□□□□□ -0.02
UPF3A-210ENST00000493727 SZT2Q5T011 3432 aa14.92□□□□□ -0.02
UPF3A-210ENST00000493727 FAM205AQ6ZU69 1335 aa14.92□□□□□ -0.02
UPF3A-210ENST00000493727 MROH5Q6ZUA9 1318 aa14.92□□□□□ -0.02
UPF3A-210ENST00000493727 IGF2BP3O00425 579 aaKnown RBP eCLIP14.91□□□□□ -0.02
UPF3A-210ENST00000493727 TLL1O43897 1013 aa14.91□□□□□ -0.02
UPF3A-210ENST00000493727 PPP1R12BO60237 982 aaPredicted RBP14.91□□□□□ -0.02
UPF3A-210ENST00000493727 GJA5P36382 358 aa14.91□□□□□ -0.02
UPF3A-210ENST00000493727 OS9Q13438 667 aaPredicted RBP14.91□□□□□ -0.02
UPF3A-210ENST00000493727 SIRT2Q8IXJ6 389 aa14.91□□□□□ -0.02
UPF3A-210ENST00000493727 IL27Q8NEV9 243 aa14.91□□□□□ -0.02
UPF3A-210ENST00000493727 SSH3Q8TE77 659 aa14.91□□□□□ -0.02
UPF3A-210ENST00000493727 GCC1Q96CN9 775 aa14.91□□□□□ -0.02
UPF3A-210ENST00000493727 DEFB129Q9H1M3 183 aa14.91□□□□□ -0.02
UPF3A-210ENST00000493727 PCDHGC3Q9UN70 934 aa14.91□□□□□ -0.02
UPF3A-210ENST00000493727 UNCXA6NJT0 531 aa14.9□□□□□ -0.02
UPF3A-210ENST00000493727 SPTLC1O15269 473 aa14.9□□□□□ -0.02
UPF3A-210ENST00000493727 FDX1P10109 184 aa14.9□□□□□ -0.02
UPF3A-210ENST00000493727 HIBADHP31937 336 aaKnown RBP14.9□□□□□ -0.02
UPF3A-210ENST00000493727 INHBEP58166 350 aa14.9□□□□□ -0.02
UPF3A-210ENST00000493727 TNFAIP1Q13829 316 aa14.9□□□□□ -0.02
UPF3A-210ENST00000493727 SUPT20HL1Q3ZLR7 823 aa14.9□□□□□ -0.02
UPF3A-210ENST00000493727 CFAP100Q494V2 611 aa14.9□□□□□ -0.02
UPF3A-210ENST00000493727 CENPQQ7L2Z9 268 aaPredicted RBP14.9□□□□□ -0.02
UPF3A-210ENST00000493727 TDRD7Q8NHU6 1098 aaKnown RBP14.9□□□□□ -0.02
UPF3A-210ENST00000493727 WNK4Q96J92 1243 aa14.9□□□□□ -0.02
UPF3A-210ENST00000493727 CLMNQ96JQ2 1002 aa14.9□□□□□ -0.02
UPF3A-210ENST00000493727 TRIM17Q9Y577 477 aa14.9□□□□□ -0.02
UPF3A-210ENST00000493727 F8W031 263 aaPredicted RBP14.89□□□□□ -0.03
UPF3A-210ENST00000493727 IGHDP01880 384 aa14.89□□□□□ -0.03
UPF3A-210ENST00000493727 RBM5P52756 815 aaKnown RBP eCLIP14.89□□□□□ -0.03
UPF3A-210ENST00000493727 BRICD5Q6PL45 260 aa14.89□□□□□ -0.03
UPF3A-210ENST00000493727 PCDHAC2Q9Y5I4 1007 aa14.89□□□□□ -0.03
UPF3A-210ENST00000493727 AOX1Q06278 1338 aa14.89□□□□□ -0.03
UPF3A-210ENST00000493727 TRIOBPQ9H2D6 2365 aa14.88□□□□□ -0.03
UPF3A-210ENST00000493727 RANBP2P49792 3224 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms